Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115350428

Identifier: 115350428

GI number: 115350428

Start: 420594

End: 420902

Strand: Direct

Name: 115350428

Synonym: Bamb_0374

Alternate gene names: NA

Gene position: 420594-420902 (Clockwise)

Preceding gene: 115350427

Following gene: 115350429

Centisome position: 11.83

GC content: 54.05

Gene sequence:

>309_bases
ATGGGCAGGATACTTTGTAAATCGCATGGCGCGACCGATGTGATACACGTTTCGAGCGATATCGCGGCCGACATGAAAAC
GGATGCAGGGCGCCTGGAAATGCTCCGTTACGACATCGACTGGCTGGGAGACGGACGCCCCGACATTTCGTACTTCGTCT
CGACGGAGGTCGCGAAACAATTTAGTCTGCCTGAGCCTGGTGATGCGCCGTTTGGACCGGATTTCGAGGAGAAACATGCG
GCTGTCTTCGACAAGCTTGTCTCTGTTTGCGCCAAGTGTTTTGGCGAGTATCAAAGCAGAATTGCCTGA

Upstream 100 bases:

>100_bases
GAGACATCTTGCGAGCGGGCGGTGCGCAGAATGTACCAACCACAACGCGCGAAACCATCAAGTGGATAATTGCGAACGGG
AAACGTCAATAGGATGAGGC

Downstream 100 bases:

>100_bases
CCGGTAGGTGCTGAAAATGAATGATCGTGACGAGAAATTGCAACTGGTGCGTGAGGTAATCGATTTCGTTGTTGAACAAC
CCTATGATCCTGAAGTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MGRILCKSHGATDVIHVSSDIAADMKTDAGRLEMLRYDIDWLGDGRPDISYFVSTEVAKQFSLPEPGDAPFGPDFEEKHA
AVFDKLVSVCAKCFGEYQSRIA

Sequences:

>Translated_102_residues
MGRILCKSHGATDVIHVSSDIAADMKTDAGRLEMLRYDIDWLGDGRPDISYFVSTEVAKQFSLPEPGDAPFGPDFEEKHA
AVFDKLVSVCAKCFGEYQSRIA
>Mature_101_residues
GRILCKSHGATDVIHVSSDIAADMKTDAGRLEMLRYDIDWLGDGRPDISYFVSTEVAKQFSLPEPGDAPFGPDFEEKHAA
VFDKLVSVCAKCFGEYQSRIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11243; Mature: 11112

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRILCKSHGATDVIHVSSDIAADMKTDAGRLEMLRYDIDWLGDGRPDISYFVSTEVAKQ
CCCEECCCCCCCEEEECCCCHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
FSLPEPGDAPFGPDFEEKHAAVFDKLVSVCAKCFGEYQSRIA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GRILCKSHGATDVIHVSSDIAADMKTDAGRLEMLRYDIDWLGDGRPDISYFVSTEVAKQ
CCEECCCCCCCEEEECCCCHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
FSLPEPGDAPFGPDFEEKHAAVFDKLVSVCAKCFGEYQSRIA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA