| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115350426
Identifier: 115350426
GI number: 115350426
Start: 418105
End: 418500
Strand: Direct
Name: 115350426
Synonym: Bamb_0372
Alternate gene names: NA
Gene position: 418105-418500 (Clockwise)
Preceding gene: 115350425
Following gene: 115350427
Centisome position: 11.76
GC content: 45.96
Gene sequence:
>396_bases ATGAATACGACAACGAAAGTGATGAATCCCCAGGCGATCACTTCAATTTATGGAGAATTTCCTTCTCTTATCGGAGCAGA GCTAACCGAGGTTCGTGTCGCTCGAGACGAGCCAAGGATATCGGTTAGGTTTGCAACGGAACGAAGACCGATAAAGCACC CTGCGCGGTGGCCGCAAAATTACGATGAGATTTATATCGGAATTTCGTTTGTTGGGGTGTGCGATTTTTCGTTTTTCCAA TGGGGGCAAAAAAATATCGTGGAAGAGGTTGATTTAAAGGATATTGATGATCGGGTGTCCGTTCGGTTTTCTTGCAAGAA CCAAGTTGCGTTGAAATTCTCATGCGATTGGATTCGTATTGAGGGCGTTGCCTGGGGGTATGTCGGGAGCCATTAA
Upstream 100 bases:
>100_bases TGAATCGATACAGCCGCGTGCAGTTCTTCTTCGATCCGGTCGGCAATCTGGTGCGCGAATATATGGATGATCATTACTGC TGCAACTATCAAAACAGGAA
Downstream 100 bases:
>100_bases TTGATAAATCAATCGATTTCGGTCACATATTTGAGGTGGCTCAAGTGTTGATTTGGCGAATGATATGGGGTGGCGAATAT GTATACCGAAGTGATCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MNTTTKVMNPQAITSIYGEFPSLIGAELTEVRVARDEPRISVRFATERRPIKHPARWPQNYDEIYIGISFVGVCDFSFFQ WGQKNIVEEVDLKDIDDRVSVRFSCKNQVALKFSCDWIRIEGVAWGYVGSH
Sequences:
>Translated_131_residues MNTTTKVMNPQAITSIYGEFPSLIGAELTEVRVARDEPRISVRFATERRPIKHPARWPQNYDEIYIGISFVGVCDFSFFQ WGQKNIVEEVDLKDIDDRVSVRFSCKNQVALKFSCDWIRIEGVAWGYVGSH >Mature_131_residues MNTTTKVMNPQAITSIYGEFPSLIGAELTEVRVARDEPRISVRFATERRPIKHPARWPQNYDEIYIGISFVGVCDFSFFQ WGQKNIVEEVDLKDIDDRVSVRFSCKNQVALKFSCDWIRIEGVAWGYVGSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15090; Mature: 15090
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTTTKVMNPQAITSIYGEFPSLIGAELTEVRVARDEPRISVRFATERRPIKHPARWPQN CCCCCCCCCCHHHHHHHHHHHHHHCCCHHEEEEECCCCCEEEEEECCCCCCCCCCCCCCC YDEIYIGISFVGVCDFSFFQWGQKNIVEEVDLKDIDDRVSVRFSCKNQVALKFSCDWIRI CCEEEEEEEEEEEECCHHHHCCCHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCEEEE EGVAWGYVGSH CCEEECCCCCC >Mature Secondary Structure MNTTTKVMNPQAITSIYGEFPSLIGAELTEVRVARDEPRISVRFATERRPIKHPARWPQN CCCCCCCCCCHHHHHHHHHHHHHHCCCHHEEEEECCCCCEEEEEECCCCCCCCCCCCCCC YDEIYIGISFVGVCDFSFFQWGQKNIVEEVDLKDIDDRVSVRFSCKNQVALKFSCDWIRI CCEEEEEEEEEEEECCHHHHCCCHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCEEEE EGVAWGYVGSH CCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA