| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115350425
Identifier: 115350425
GI number: 115350425
Start: 416125
End: 416580
Strand: Direct
Name: 115350425
Synonym: Bamb_0370
Alternate gene names: NA
Gene position: 416125-416580 (Clockwise)
Preceding gene: 115350424
Following gene: 115350426
Centisome position: 11.7
GC content: 43.42
Gene sequence:
>456_bases ATGGCGGAGAATTTTTCTTTTGACCGATGGCGTGACTGTTTACATGCCTGTGCGGATTTCGCAAGCGAAGAAAAATGCGA TGAATTCTTAGGGCTATTGAAAGCAGCTGAGGAGAACATGAGCTATGAAGTTGTAGTGGAACTTCTTAGAACGTTCTCGG ATGCAGACGATTTTGGAATTCAAGATCGAACTCGAAATGTCGTGGAGGCGACCGATCGCCACATATTTTACCCCGCATTG ATTCGTGAAATTGGTGGAATAATTGATCGAGCTCCTCAAAAACAATGGGCAGTTACGATTGTGGGGATTGAATTTGAATA CGGAGATTTTGATTCTTTGATGAGAAATGTGCTGCAGTCGAGCGGCGAAGAGAGGGCTGGATTTATTTCGTTTCTGAAAT CTAGCGAATTCATGAGCGAGTATCCGAAAGTCTCGAAGTACTTGATTGGTTTGTAG
Upstream 100 bases:
>100_bases TGTTCGCTCCGTCGGAGATCCAATCAAGTACAACGAAGCGATGCAAGAAGTGCTTGCATATGCAAAGTGCCGAGGTACGT TGAAAAAGTGAGGCGATGCA
Downstream 100 bases:
>100_bases GGCATTTGGTCGACATGGTTGATGTACGGTTTCGGGCATGTGCACGGGATGCTGCTTGATGGCGAGGACGGTTGATCGGG GCGATCAGTCCGGTCGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MAENFSFDRWRDCLHACADFASEEKCDEFLGLLKAAEENMSYEVVVELLRTFSDADDFGIQDRTRNVVEATDRHIFYPAL IREIGGIIDRAPQKQWAVTIVGIEFEYGDFDSLMRNVLQSSGEERAGFISFLKSSEFMSEYPKVSKYLIGL
Sequences:
>Translated_151_residues MAENFSFDRWRDCLHACADFASEEKCDEFLGLLKAAEENMSYEVVVELLRTFSDADDFGIQDRTRNVVEATDRHIFYPAL IREIGGIIDRAPQKQWAVTIVGIEFEYGDFDSLMRNVLQSSGEERAGFISFLKSSEFMSEYPKVSKYLIGL >Mature_150_residues AENFSFDRWRDCLHACADFASEEKCDEFLGLLKAAEENMSYEVVVELLRTFSDADDFGIQDRTRNVVEATDRHIFYPALI REIGGIIDRAPQKQWAVTIVGIEFEYGDFDSLMRNVLQSSGEERAGFISFLKSSEFMSEYPKVSKYLIGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17317; Mature: 17185
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAENFSFDRWRDCLHACADFASEEKCDEFLGLLKAAEENMSYEVVVELLRTFSDADDFGI CCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC QDRTRNVVEATDRHIFYPALIREIGGIIDRAPQKQWAVTIVGIEFEYGDFDSLMRNVLQS CHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHC SGEERAGFISFLKSSEFMSEYPKVSKYLIGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AENFSFDRWRDCLHACADFASEEKCDEFLGLLKAAEENMSYEVVVELLRTFSDADDFGI CCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC QDRTRNVVEATDRHIFYPALIREIGGIIDRAPQKQWAVTIVGIEFEYGDFDSLMRNVLQS CHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHC SGEERAGFISFLKSSEFMSEYPKVSKYLIGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA