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The map label for this gene is ybgI [C]

Identifier: 115350413

GI number: 115350413

Start: 398292

End: 399038

Strand: Direct

Name: ybgI [C]

Synonym: Bamb_0358

Alternate gene names: 115350413

Gene position: 398292-399038 (Clockwise)

Preceding gene: 115350411

Following gene: 115350414

Centisome position: 11.2

GC content: 63.45

Gene sequence:

>747_bases
ATGGATCGGATCGAACTTGAATTGTACTTGAACAATACCCTTGAAACCGCGCGCTTCAAGGACTATTGCCCGAACGGCCT
CCAGGTCGAGGGGCGCCGCAAGATCGAGAAGATCGCCACCGGCGTGACGGCGTCGGTCGCGTTCCTCGAAGCCGCGCTCG
AATGGGGGGCGGATGCGGTGCTCGTTCATCACGGTTATTTCTGGCGCAACGAGGCGCCGCAGATCACGGGCCGCAAGTAT
CAGCGCCTGAAGCTGCTGCTCGCGAACGACCTGAACCTGTTCGCGTTCCATCTGCCGCTCGACGCGCACCCCGAGCTCGG
CAACAACGCGCAGCTCGGCCAGAAGCTCGGGCTGATCGGCGATCAGCGTTTCGGCGACGGCGACCTCGGCTGGATGGCGA
CGCTGCCGATGCCCGTCACGCTCGAGCACTTCGTCGCGAAGGTTGAGCGCACGCTCGGCCGCACGCCGCTCGTGCTCGGC
GATGCGGACATGCAACTGCGCCGCATCGCGTGGTGCACCGGCGCCGCGCAAAGTTATTTCGATGCCGCGATCGATGCCGG
CGCCGACGTGTTCCTGACCGGCGAGGTATCGGAATCCGTCACGCACGCGGCCGCGGAGAGCGGCGTTGCGTTCGTTGCGG
CAGGGCACCATGCCACCGAACGCTACGGAATCCAGGCGCTGGGACGCCACTTGTCCGAAGAATTCGATATCGAACACCTT
TTTATCGATATTCATAATCCGGTCTGA

Upstream 100 bases:

>100_bases
TGAGCGTCACGACGATGAACATCAGCGCGAGCAGTACGGTCACCGCCTGCGCGAAGAACAGCCAGAAGCGTCTAAGCATC
TGAATGGATTAGAGGTTTAT

Downstream 100 bases:

>100_bases
ACGACAGATTTGCGGCACCGCATCGAAATTTCACAATGTAGCAAGTGCTTAAAAGTGGAATGATTTAATTGCTCAGATAG
TGCGGGAAAACCCTTAACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MDRIELELYLNNTLETARFKDYCPNGLQVEGRRKIEKIATGVTASVAFLEAALEWGADAVLVHHGYFWRNEAPQITGRKY
QRLKLLLANDLNLFAFHLPLDAHPELGNNAQLGQKLGLIGDQRFGDGDLGWMATLPMPVTLEHFVAKVERTLGRTPLVLG
DADMQLRRIAWCTGAAQSYFDAAIDAGADVFLTGEVSESVTHAAAESGVAFVAAGHHATERYGIQALGRHLSEEFDIEHL
FIDIHNPV

Sequences:

>Translated_248_residues
MDRIELELYLNNTLETARFKDYCPNGLQVEGRRKIEKIATGVTASVAFLEAALEWGADAVLVHHGYFWRNEAPQITGRKY
QRLKLLLANDLNLFAFHLPLDAHPELGNNAQLGQKLGLIGDQRFGDGDLGWMATLPMPVTLEHFVAKVERTLGRTPLVLG
DADMQLRRIAWCTGAAQSYFDAAIDAGADVFLTGEVSESVTHAAAESGVAFVAAGHHATERYGIQALGRHLSEEFDIEHL
FIDIHNPV
>Mature_248_residues
MDRIELELYLNNTLETARFKDYCPNGLQVEGRRKIEKIATGVTASVAFLEAALEWGADAVLVHHGYFWRNEAPQITGRKY
QRLKLLLANDLNLFAFHLPLDAHPELGNNAQLGQKLGLIGDQRFGDGDLGWMATLPMPVTLEHFVAKVERTLGRTPLVLG
DADMQLRRIAWCTGAAQSYFDAAIDAGADVFLTGEVSESVTHAAAESGVAFVAAGHHATERYGIQALGRHLSEEFDIEHL
FIDIHNPV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=250, Percent_Identity=53.2, Blast_Score=253, Evalue=1e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27374; Mature: 27374

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRIELELYLNNTLETARFKDYCPNGLQVEGRRKIEKIATGVTASVAFLEAALEWGADAV
CCEEEEEEEECCCCCHHHHHHHCCCCCEECHHHHHHHHHHCHHHHHHHHHHHHHCCCCEE
LVHHGYFWRNEAPQITGRKYQRLKLLLANDLNLFAFHLPLDAHPELGNNAQLGQKLGLIG
EEECCEEECCCCCCCCCCHHHHHEEHEECCCCEEEEECCCCCCCCCCCCCHHHHHHCCCC
DQRFGDGDLGWMATLPMPVTLEHFVAKVERTLGRTPLVLGDADMQLRRIAWCTGAAQSYF
CCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHH
DAAIDAGADVFLTGEVSESVTHAAAESGVAFVAAGHHATERYGIQALGRHLSEEFDIEHL
HHHHCCCCCEEEECCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEE
FIDIHNPV
EEEECCCC
>Mature Secondary Structure
MDRIELELYLNNTLETARFKDYCPNGLQVEGRRKIEKIATGVTASVAFLEAALEWGADAV
CCEEEEEEEECCCCCHHHHHHHCCCCCEECHHHHHHHHHHCHHHHHHHHHHHHHCCCCEE
LVHHGYFWRNEAPQITGRKYQRLKLLLANDLNLFAFHLPLDAHPELGNNAQLGQKLGLIG
EEECCEEECCCCCCCCCCHHHHHEEHEECCCCEEEEECCCCCCCCCCCCCHHHHHHCCCC
DQRFGDGDLGWMATLPMPVTLEHFVAKVERTLGRTPLVLGDADMQLRRIAWCTGAAQSYF
CCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHH
DAAIDAGADVFLTGEVSESVTHAAAESGVAFVAAGHHATERYGIQALGRHLSEEFDIEHL
HHHHCCCCCEEEECCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEE
FIDIHNPV
EEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]