| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is tatA
Identifier: 115350409
GI number: 115350409
Start: 395205
End: 395435
Strand: Direct
Name: tatA
Synonym: Bamb_0354
Alternate gene names: 115350409
Gene position: 395205-395435 (Clockwise)
Preceding gene: 115350408
Following gene: 115350410
Centisome position: 11.11
GC content: 61.47
Gene sequence:
>231_bases ATGGGTGGATTGAGCATTTGGCACTGGCTGATCGTGCTGCTGATCGTCGCGCTGGTTTTCGGTACGAAGAAGCTGCGCAA CATCGGCAACGACCTCGGCAGCGCCGTGAAGGGCTTCAAGGACGGCATGAAGGAAGGCGAGACGCCGGCGGATGCACAGC AGCTGCCGCGCACGGGCACGGTCGACGTCAACGCGAAGGAAACGACGCGTTCCGACTCGAACAAGGCGTAA
Upstream 100 bases:
>100_bases GGGTTGACGTAGCGGGGCGTTTCCCCGCATCGATAGTCGAAGCCGGCGTGCCGCCGGCGATTTGCGCCGCCACGCGGCAT GGTTGAGGAGAGGTTTCATC
Downstream 100 bases:
>100_bases CGCCGGCAAGCTGACAGGCATACGCGATGCTGGATCTCGGTCTTTCGAAGATGGCGCTGATCGGCGTCGTCGCGCTCGTG GTGCTCGGCCCCGAGCGCCT
Product: twin arginine translocase protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MGGLSIWHWLIVLLIVALVFGTKKLRNIGNDLGSAVKGFKDGMKEGETPADAQQLPRTGTVDVNAKETTRSDSNKA
Sequences:
>Translated_76_residues MGGLSIWHWLIVLLIVALVFGTKKLRNIGNDLGSAVKGFKDGMKEGETPADAQQLPRTGTVDVNAKETTRSDSNKA >Mature_75_residues GGLSIWHWLIVLLIVALVFGTKKLRNIGNDLGSAVKGFKDGMKEGETPADAQQLPRTGTVDVNAKETTRSDSNKA
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatA/E family
Homologues:
Organism=Escherichia coli, GI87082337, Length=51, Percent_Identity=56.8627450980392, Blast_Score=65, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TATA_BURA4 (B1YRW6)
Other databases:
- EMBL: CP001025 - RefSeq: YP_001807080.1 - GeneID: 6177605 - GenomeReviews: CP001025_GR - KEGG: bac:BamMC406_0363 - HOGENOM: HBG751935 - OMA: VWHWVIV - ProtClustDB: PRK02958 - BioCyc: BAMB398577:BAMMC406_0363-MONOMER - HAMAP: MF_00236 - InterPro: IPR003369 - InterPro: IPR006312 - TIGRFAMs: TIGR01411
Pfam domain/function: PF02416 MttA_Hcf106
EC number: NA
Molecular weight: Translated: 8167; Mature: 8036
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x12de6ff4)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGLSIWHWLIVLLIVALVFGTKKLRNIGNDLGSAVKGFKDGMKEGETPADAQQLPRTGT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCC VDVNAKETTRSDSNKA CCCCCHHHCCCCCCCH >Mature Secondary Structure GGLSIWHWLIVLLIVALVFGTKKLRNIGNDLGSAVKGFKDGMKEGETPADAQQLPRTGT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCC VDVNAKETTRSDSNKA CCCCCHHHCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA