Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

Click here to switch to the map view.

The map label for this gene is tatA

Identifier: 115350409

GI number: 115350409

Start: 395205

End: 395435

Strand: Direct

Name: tatA

Synonym: Bamb_0354

Alternate gene names: 115350409

Gene position: 395205-395435 (Clockwise)

Preceding gene: 115350408

Following gene: 115350410

Centisome position: 11.11

GC content: 61.47

Gene sequence:

>231_bases
ATGGGTGGATTGAGCATTTGGCACTGGCTGATCGTGCTGCTGATCGTCGCGCTGGTTTTCGGTACGAAGAAGCTGCGCAA
CATCGGCAACGACCTCGGCAGCGCCGTGAAGGGCTTCAAGGACGGCATGAAGGAAGGCGAGACGCCGGCGGATGCACAGC
AGCTGCCGCGCACGGGCACGGTCGACGTCAACGCGAAGGAAACGACGCGTTCCGACTCGAACAAGGCGTAA

Upstream 100 bases:

>100_bases
GGGTTGACGTAGCGGGGCGTTTCCCCGCATCGATAGTCGAAGCCGGCGTGCCGCCGGCGATTTGCGCCGCCACGCGGCAT
GGTTGAGGAGAGGTTTCATC

Downstream 100 bases:

>100_bases
CGCCGGCAAGCTGACAGGCATACGCGATGCTGGATCTCGGTCTTTCGAAGATGGCGCTGATCGGCGTCGTCGCGCTCGTG
GTGCTCGGCCCCGAGCGCCT

Product: twin arginine translocase protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 75

Protein sequence:

>76_residues
MGGLSIWHWLIVLLIVALVFGTKKLRNIGNDLGSAVKGFKDGMKEGETPADAQQLPRTGTVDVNAKETTRSDSNKA

Sequences:

>Translated_76_residues
MGGLSIWHWLIVLLIVALVFGTKKLRNIGNDLGSAVKGFKDGMKEGETPADAQQLPRTGTVDVNAKETTRSDSNKA
>Mature_75_residues
GGLSIWHWLIVLLIVALVFGTKKLRNIGNDLGSAVKGFKDGMKEGETPADAQQLPRTGTVDVNAKETTRSDSNKA

Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei

COG id: COG1826

COG function: function code U; Sec-independent protein secretion pathway components

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatA/E family

Homologues:

Organism=Escherichia coli, GI87082337, Length=51, Percent_Identity=56.8627450980392, Blast_Score=65, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TATA_BURA4 (B1YRW6)

Other databases:

- EMBL:   CP001025
- RefSeq:   YP_001807080.1
- GeneID:   6177605
- GenomeReviews:   CP001025_GR
- KEGG:   bac:BamMC406_0363
- HOGENOM:   HBG751935
- OMA:   VWHWVIV
- ProtClustDB:   PRK02958
- BioCyc:   BAMB398577:BAMMC406_0363-MONOMER
- HAMAP:   MF_00236
- InterPro:   IPR003369
- InterPro:   IPR006312
- TIGRFAMs:   TIGR01411

Pfam domain/function: PF02416 MttA_Hcf106

EC number: NA

Molecular weight: Translated: 8167; Mature: 8036

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12de6ff4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGLSIWHWLIVLLIVALVFGTKKLRNIGNDLGSAVKGFKDGMKEGETPADAQQLPRTGT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCC
VDVNAKETTRSDSNKA
CCCCCHHHCCCCCCCH
>Mature Secondary Structure 
GGLSIWHWLIVLLIVALVFGTKKLRNIGNDLGSAVKGFKDGMKEGETPADAQQLPRTGT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCC
VDVNAKETTRSDSNKA
CCCCCHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA