| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is hisC [H]
Identifier: 115350399
GI number: 115350399
Start: 388627
End: 389700
Strand: Direct
Name: hisC [H]
Synonym: Bamb_0344
Alternate gene names: 115350399
Gene position: 388627-389700 (Clockwise)
Preceding gene: 115350398
Following gene: 115350400
Centisome position: 10.93
GC content: 68.9
Gene sequence:
>1074_bases ATGACGACGCCCCAAGACATCATCCGCCGCGACGTGCTCGCGATGACGAGCTACCCGGTGCCCGACGCGAGCGGCTTCGT GAAGCTCGACGCGATGGAGAACCCGTATTCGCTGCCCGCGCCGCTGGCGGCCGCGCTCGGCGAGCGCCTCGCGCAGGTCG CGCTGAACCGCTACCCGGCGCCGCGCCCGGGCGCGCTGCTCGACAAGCTGCGCCGCGCGATGGGCGTGCCGGCCGCGTGC GACGTGCTGCTCGGCAACGGCTCGGACGAAATCATCAGCATGATGTCGGTGGCATGCGCGAAGCCGGGCGCGAAGGTGCT CGCGCCGGTGCCGGGCTTTGTGATGTACGAGCTGTCCGCGAAGTTCGCGCAGCTCGAATTCGTCGGCGTGCCGCTCAAGG CAGACCTGACGCTCGACGCCGACGCGATGATCGCGGCGATCGCCGAGCACCGGCCCGCGCTCGTCTATCTCGCGTACCCG AACAATCCGACCGGCACGCTGTACGACGAAGCCGACGTCGAGCGGATCATCGCGGCCGCGCAACACAGCCTGATCGTGAT CGACGAGGCGTATCAACCGTTCGCGGAGCGCTCGTGGCTGCCGCGCGCCGCCGAGTTCGACAACGTCGTCGTGATGCGCA CGGTGTCGAAGCTCGGCCTGGCCGGCATCCGCCTCGGCTATCTCGCGGGGCTGCCCACCTGGCTGACCGAGTTCGACAAG GTGCGCCCGCCGTACAACATCAACGTGCTGACCCAGGCGAGCGCCGATTTCCTGCTCGACCACCTCGACGTGCTCGATGC GCAGGCGGCCGAACTGCGTGCGGAACGCACGCGCCTCGCGCAGGCCGTGGCCGCGCTGCCGGGCGCGACGGTGTTCCCGA GCGCCGGCAATTTCCTGCTGGTGCGCGTGCCGGACGCGGCGGCGGTGTTCGATGCGCTGCTCACCGAGCGGGTGCTGATC AAAAACGTGAGTAAAATGCATCCGTTGCTGGCCGAATGCGTGCGACTGACCGTCGGTTCTCCCGACGAAAACGCGCGCCT GCTGGCTGCCTTGAAACTCGCGCTGCCCGGTTGA
Upstream 100 bases:
>100_bases ACGCATCGGCCGCGGTCGACGAGGAGACCCTGCGCACGGCGGCAGCCGCCACCGTGCCGAGACCATTTGACGCCGGCGCG AAGCACGCCGGCTTGAGACC
Downstream 100 bases:
>100_bases GCCCAGGGCGCGGCGGCGCGCGACGATCAATCCCCATTTACATCAGACTCAATCAAGGAATTGCCATGCGTGTGGCGGAA GTCGTTCGCAATACCAGCGA
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase [H]
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MTTPQDIIRRDVLAMTSYPVPDASGFVKLDAMENPYSLPAPLAAALGERLAQVALNRYPAPRPGALLDKLRRAMGVPAAC DVLLGNGSDEIISMMSVACAKPGAKVLAPVPGFVMYELSAKFAQLEFVGVPLKADLTLDADAMIAAIAEHRPALVYLAYP NNPTGTLYDEADVERIIAAAQHSLIVIDEAYQPFAERSWLPRAAEFDNVVVMRTVSKLGLAGIRLGYLAGLPTWLTEFDK VRPPYNINVLTQASADFLLDHLDVLDAQAAELRAERTRLAQAVAALPGATVFPSAGNFLLVRVPDAAAVFDALLTERVLI KNVSKMHPLLAECVRLTVGSPDENARLLAALKLALPG
Sequences:
>Translated_357_residues MTTPQDIIRRDVLAMTSYPVPDASGFVKLDAMENPYSLPAPLAAALGERLAQVALNRYPAPRPGALLDKLRRAMGVPAAC DVLLGNGSDEIISMMSVACAKPGAKVLAPVPGFVMYELSAKFAQLEFVGVPLKADLTLDADAMIAAIAEHRPALVYLAYP NNPTGTLYDEADVERIIAAAQHSLIVIDEAYQPFAERSWLPRAAEFDNVVVMRTVSKLGLAGIRLGYLAGLPTWLTEFDK VRPPYNINVLTQASADFLLDHLDVLDAQAAELRAERTRLAQAVAALPGATVFPSAGNFLLVRVPDAAAVFDALLTERVLI KNVSKMHPLLAECVRLTVGSPDENARLLAALKLALPG >Mature_356_residues TTPQDIIRRDVLAMTSYPVPDASGFVKLDAMENPYSLPAPLAAALGERLAQVALNRYPAPRPGALLDKLRRAMGVPAACD VLLGNGSDEIISMMSVACAKPGAKVLAPVPGFVMYELSAKFAQLEFVGVPLKADLTLDADAMIAAIAEHRPALVYLAYPN NPTGTLYDEADVERIIAAAQHSLIVIDEAYQPFAERSWLPRAAEFDNVVVMRTVSKLGLAGIRLGYLAGLPTWLTEFDKV RPPYNINVLTQASADFLLDHLDVLDAQAAELRAERTRLAQAVAALPGATVFPSAGNFLLVRVPDAAAVFDALLTERVLIK NVSKMHPLLAECVRLTVGSPDENARLLAALKLALPG
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=366, Percent_Identity=30.327868852459, Blast_Score=129, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6322075, Length=365, Percent_Identity=27.9452054794521, Blast_Score=120, Evalue=4e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 38285; Mature: 38154
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPQDIIRRDVLAMTSYPVPDASGFVKLDAMENPYSLPAPLAAALGERLAQVALNRYPA CCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCC PRPGALLDKLRRAMGVPAACDVLLGNGSDEIISMMSVACAKPGAKVLAPVPGFVMYELSA CCCCHHHHHHHHHHCCCHHHHEEECCCHHHHHHHHHHHHCCCCCCEECCCCCCEEEHHHH KFAQLEFVGVPLKADLTLDADAMIAAIAEHRPALVYLAYPNNPTGTLYDEADVERIIAAA HHEEEEEEECCEEECCEECHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH QHSLIVIDEAYQPFAERSWLPRAAEFDNVVVMRTVSKLGLAGIRLGYLAGLPTWLTEFDK CCCEEEEECCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH VRPPYNINVLTQASADFLLDHLDVLDAQAAELRAERTRLAQAVAALPGATVFPSAGNFLL CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEE VRVPDAAAVFDALLTERVLIKNVSKMHPLLAECVRLTVGSPDENARLLAALKLALPG EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure TTPQDIIRRDVLAMTSYPVPDASGFVKLDAMENPYSLPAPLAAALGERLAQVALNRYPA CCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCC PRPGALLDKLRRAMGVPAACDVLLGNGSDEIISMMSVACAKPGAKVLAPVPGFVMYELSA CCCCHHHHHHHHHHCCCHHHHEEECCCHHHHHHHHHHHHCCCCCCEECCCCCCEEEHHHH KFAQLEFVGVPLKADLTLDADAMIAAIAEHRPALVYLAYPNNPTGTLYDEADVERIIAAA HHEEEEEEECCEEECCEECHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH QHSLIVIDEAYQPFAERSWLPRAAEFDNVVVMRTVSKLGLAGIRLGYLAGLPTWLTEFDK CCCEEEEECCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH VRPPYNINVLTQASADFLLDHLDVLDAQAAELRAERTRLAQAVAALPGATVFPSAGNFLL CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEE VRVPDAAAVFDALLTERVLIKNVSKMHPLLAECVRLTVGSPDENARLLAALKLALPG EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12754231 [H]