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Identifier: 11499354

GI number: 11499354

Start: 1583148

End: 1583900

Strand: Reverse

Name: Not Available

Synonym: AF1765

Alternate gene names: NA

Gene position: 1583900-1583148 (Counterclockwise)

Preceding gene: 11499356

Following gene: 11499353

Centisome position: 72.71

GC content: 50.73

Gene sequence:

>753_bases
ATGTATTTCGACTCACATCTTCATTCAGAGGGTCTGGGCTTCTCCGAGCTTGTTAAGCTGAAGGAAAACGGAATAAAGGA
GGTTTGCAGCCTCGCCTTCTTTCCCGTGAAGCCAAAATACCCTCAGACCATGATAGATGTCTTCAGAAAGCTAACAGAAT
TCGAGCCTCTCAGATGTGAGGCTGCAGGGGTTAAGATGCATCCCGCTGTTGGAATTCATCCGCGCTGCATTCCTCCTGAC
TATGAGTTCGTGCTGGGCTACCTTGAAGAGGGGGAGTGGGTTGCCTTCGGCGAAATAGGGCTTGAGCTTGTAACTGATGA
GGAGATTGAAGTTCTCAAATCGCAGCTCGAGCTGGCGAAGAGGATGGACGTGCCGTGCATAATTCACACACCGAGAGGAA
ACAAGCTAAAAGCAACAAGGAAAACCCTCGAAATCCTCGAAAGTCTCGACTTTCCCGCAGACCTTGCGGTAATAGACCAC
GTGAACTTCGAAACACTCGACATGGTTCTTGAGACTGAGTACTGGATTGGCCTCACAGTTCAGCCAGGAAAGCTTTCTGC
CGAGGACGCTGCAAGAATAGTGGCTGAACACGGCCCGGAGAGGTTCATGCTGAACAGCGATGCGGGTTACAGGGATGTAG
AAATAACCACGGTGGCGGAGGCTGCTGTAAAGATTGAGGAGGCTGTGGGCAGGGAGGAGATGGAGAAGGTTGCGAGGGAA
AACGCCAGAAAATTTTTGAGGGTGTTGGAATGA

Upstream 100 bases:

>100_bases
AATGCGAACAACTTGAACTTCACCATGTAAAATAAAGTAACGAACTTATAAAAGCGTTTGGTGAGAAATTTTTAATAATC
CTCACGAACATCCGAGGAGC

Downstream 100 bases:

>100_bases
AGAGGCCCACGCTCGATGAGTACTTCATGGAAATCGCCTCGGTTGTGGCGAAGCGCTCCACCTGTCTTAGACAGCACGTC
GGGGCCGTCATAGTCAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MYFDSHLHSEGLGFSELVKLKENGIKEVCSLAFFPVKPKYPQTMIDVFRKLTEFEPLRCEAAGVKMHPAVGIHPRCIPPD
YEFVLGYLEEGEWVAFGEIGLELVTDEEIEVLKSQLELAKRMDVPCIIHTPRGNKLKATRKTLEILESLDFPADLAVIDH
VNFETLDMVLETEYWIGLTVQPGKLSAEDAARIVAEHGPERFMLNSDAGYRDVEITTVAEAAVKIEEAVGREEMEKVARE
NARKFLRVLE

Sequences:

>Translated_250_residues
MYFDSHLHSEGLGFSELVKLKENGIKEVCSLAFFPVKPKYPQTMIDVFRKLTEFEPLRCEAAGVKMHPAVGIHPRCIPPD
YEFVLGYLEEGEWVAFGEIGLELVTDEEIEVLKSQLELAKRMDVPCIIHTPRGNKLKATRKTLEILESLDFPADLAVIDH
VNFETLDMVLETEYWIGLTVQPGKLSAEDAARIVAEHGPERFMLNSDAGYRDVEITTVAEAAVKIEEAVGREEMEKVARE
NARKFLRVLE
>Mature_250_residues
MYFDSHLHSEGLGFSELVKLKENGIKEVCSLAFFPVKPKYPQTMIDVFRKLTEFEPLRCEAAGVKMHPAVGIHPRCIPPD
YEFVLGYLEEGEWVAFGEIGLELVTDEEIEVLKSQLELAKRMDVPCIIHTPRGNKLKATRKTLEILESLDFPADLAVIDH
VNFETLDMVLETEYWIGLTVQPGKLSAEDAARIVAEHGPERFMLNSDAGYRDVEITTVAEAAVKIEEAVGREEMEKVARE
NARKFLRVLE

Specific function: Unknown

COG id: COG1099

COG function: function code R; Predicted metal-dependent hydrolases with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatD DNase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015992
- InterPro:   IPR001130
- InterPro:   IPR018228
- InterPro:   IPR012022 [H]

Pfam domain/function: PF01026 TatD_DNase [H]

EC number: NA

Molecular weight: Translated: 28290; Mature: 28290

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFDSHLHSEGLGFSELVKLKENGIKEVCSLAFFPVKPKYPQTMIDVFRKLTEFEPLRCE
CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEE
AAGVKMHPAVGIHPRCIPPDYEFVLGYLEEGEWVAFGEIGLELVTDEEIEVLKSQLELAK
ECCEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCEEEECCHHHHHHHHHHHHHH
RMDVPCIIHTPRGNKLKATRKTLEILESLDFPADLAVIDHVNFETLDMVLETEYWIGLTV
HCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHEECCEEEEEEE
QPGKLSAEDAARIVAEHGPERFMLNSDAGYRDVEITTVAEAAVKIEEAVGREEMEKVARE
CCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHH
NARKFLRVLE
HHHHHHHHCC
>Mature Secondary Structure
MYFDSHLHSEGLGFSELVKLKENGIKEVCSLAFFPVKPKYPQTMIDVFRKLTEFEPLRCE
CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEE
AAGVKMHPAVGIHPRCIPPDYEFVLGYLEEGEWVAFGEIGLELVTDEEIEVLKSQLELAK
ECCEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCEEEECCHHHHHHHHHHHHHH
RMDVPCIIHTPRGNKLKATRKTLEILESLDFPADLAVIDHVNFETLDMVLETEYWIGLTV
HCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHEECCEEEEEEE
QPGKLSAEDAARIVAEHGPERFMLNSDAGYRDVEITTVAEAAVKIEEAVGREEMEKVARE
CCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHH
NARKFLRVLE
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]