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Identifier: 11498993

GI number: 11498993

Start: 1246806

End: 1249226

Strand: Reverse

Name: Not Available

Synonym: AF1398

Alternate gene names: NA

Gene position: 1249226-1246806 (Counterclockwise)

Preceding gene: 11498994

Following gene: 11498987

Centisome position: 57.35

GC content: 52.09

Gene sequence:

>2421_bases
ATGCGCCTGCTGGCGGCTTTATTTATTCTTCTCATCCTGACCCCCGCCTCCGCTCTCACTCTCGACGTGAGCGGGGGGTG
TGTGGATAAACCGGTTGAAGTTGTAACTGACAAGGAAGCAACAATTGTTTTCAGAATGAATTCAGGCACACCAGTTTTCG
CTGAAGTTTCACCATCAAATCCCGCTTACTTCAAGCCGAGAGTTCCTGGAGAGCTTGTTGTAATCGCCATGGCAGGAGAT
GAGCAGGTCACCAAAACTCTGCAGGTTACAACCTGCAGCAGTGGCAGCAGTGGTGGAGGAGGCACTACTTCTAAGCAGTA
CCTTCCCTACGGGACGTTCGAAGTTCTTGGCAAAGAAGTTGAGTGGAGAACCGCTTACGGAGCGCTGAAAAAGGCATCGG
AAATAATGGGATTCTCCATAACTCCCGAACTTACCGACTGGGGAATCTTCGTAAAATGCGTGAGGGATTTGTGCAAGGGG
GATATAGGGGAGACTTCAGGCTGGATGTACTGGGTCAACTACCCTAACGAGCCGTTGCCGGGAGTTGCGGCTACAGAGAA
AAGAGTCTATCCCGGAGATAGGATAGTCTGGTACTTCTCCAGAAGCATGAGCGACACCCCTGACTCCTCACCCTTCAAGA
TATACATAGACATAGGGGACAGCTATGAAATTACCGTCAGCATAATCTGGCCGTCAAAGATTCCACCGGTGGCCGACTTT
ACGTTCTCCCCAGCAAACCCCGTTGCGGGAGAGGAGGTTGTGTTCAATGCCTCCAAGTCGGTTGACGATGGCCAGATAAC
GGATTACATCTGGAACTTCGGGGACGGAAAAAGCGGAAGGGGGGTTTCCGTAACTCACATTTACTCCGAGCCGGGAACGT
ATGAAGTCTCCCTCACAGTCTTCGACAACGATGCCCTCTCTGACACCATCACAAAGGCCGTAAACGTCAGCGAGCCGGGA
ATTCACCTGAACCTCACGGGGCAGGTTATCACCATTCAGCCCGGTAAGACGAAGGTAATTCCTTCCGAACAGCTAATGAC
AAACCTGTCAATAACCGGCCTGACTTTCGAATCGGAAAAACCTGTGCAGGTGGTTATTGCAGAGTCCCACATCCCTCCGG
GTGTGGTTTACGGAACGTTTTACAGGTGGTTTGAGATTACGGCAAACGACTCTTTGAAGGCGACTATTGATTTCAGAGTT
CCCAAAGACGTTGCCGAGGGTAGGGAAGTGGTTCTCATGAAGTACAACGGAAGCTGGTTCGAGCTGCCGACGGAGAAAAC
CGGGAAGGATGAGAATTACCTCTACTACTCCGCCGAAACGGAATCCCTCAGCGTTATTGCGATAACCATCAAGTGGGACA
GCTTCCCCCTCAATGTAACTGATGCGAGAATCCAGAAGGCCCTGGACTGGCTCAGGACGATTCAAAACGATGATGGTGGG
TTTGCGAATCCGGGTGAGAACAGCAGCATTTCTGCGACCGCGTGGGCAATCATGGCCATAGTTGCTGCAGGTCAGGACCC
CCATGAGTGGGTTAAAAACGGAAAAAGCCCCATCGACTTTGTGAGGGAAAGGCTGAAAGATGAGATGGGCACGATGGGGG
CTGAGGACTACGCGAGAACCATACTGGCCCTTGTTTACGCAAACGAGAATCCGAGGAACTTTGCAGGCGTTGACCTCGTG
GGAAAGCTGAAGTCCTACATGAAGGAAAACGGGCAGATAGGGGACTTCACCTACAAGACCATCTGGGGAATCATCGCCCT
GGCATCGGTTGGTGAGAACACAACAGCATCTGCAGAGTGGCTGAAAGCTCAGCAGGATGTCGATGGGGGATTCGCCTGGA
GTGCGGGGGAGGAGAGCGACTTCGACGACACTGCAGCAGCGATTGAGGCTCTGATAGCTGCAGAGGAGCCAAGAGATTCG
GATGTGATCAAAAAAGCCCTTGATTACCTCAAGACCGGACAGAACGACGATGGTGGGATGAGGTACTTCGGGAGTTCAGC
AAGCAACGCTGCCAGTGATGCTTGGACGATACAGGCCCTCGTTGCCGCGGGAGTCAATCCGATGGAGTGGGCAAAGAACA
ACACGAGTGTGGTGGAGCATCTGCTTAGCCTTCAGACGGAGGACGGCTACTTCAAGTACACAAAGTATCAGACCTCCAAT
CCCGGTTTCATGACAGTTTCAGCCATCATTGCATTGCTGGGAAAGCCGCACCCGATTAAGGTGAACGCATCTGTTGCTAC
CGCTCCTGCAATCACCGCTACTACCACCACTACTGCAACGGCATCTACTACAACCACCACCACAACTGCTACCACCACAA
CTACGGCAGCTGCTGAGAGAAAATCCACTCCCGGCTTTTCATCAGCTGCAGCAATTGCGGCATTAGCTTTAACTGCAGCC
CTTTTAAGGAGAAAAACATGA

Upstream 100 bases:

>100_bases
ATCAGGGGACTTACAGCCTCTATGCAGGAGTTTACAGGTTCAGCGAGTATCCTGCCAACCTGATTCACCTCTATGGCCCG
GCAAGCTGTGAGGTGAGCTG

Downstream 100 bases:

>100_bases
GGAAGCACACAATCTTACTTTTACTTTTAATCGCCGCCATTCTTCCTCTCTGCTCATCCAAACCGGCGGAGGAGCATACA
TCTTTCAACCTAACGGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 806; Mature: 806

Protein sequence:

>806_residues
MRLLAALFILLILTPASALTLDVSGGCVDKPVEVVTDKEATIVFRMNSGTPVFAEVSPSNPAYFKPRVPGELVVIAMAGD
EQVTKTLQVTTCSSGSSGGGGTTSKQYLPYGTFEVLGKEVEWRTAYGALKKASEIMGFSITPELTDWGIFVKCVRDLCKG
DIGETSGWMYWVNYPNEPLPGVAATEKRVYPGDRIVWYFSRSMSDTPDSSPFKIYIDIGDSYEITVSIIWPSKIPPVADF
TFSPANPVAGEEVVFNASKSVDDGQITDYIWNFGDGKSGRGVSVTHIYSEPGTYEVSLTVFDNDALSDTITKAVNVSEPG
IHLNLTGQVITIQPGKTKVIPSEQLMTNLSITGLTFESEKPVQVVIAESHIPPGVVYGTFYRWFEITANDSLKATIDFRV
PKDVAEGREVVLMKYNGSWFELPTEKTGKDENYLYYSAETESLSVIAITIKWDSFPLNVTDARIQKALDWLRTIQNDDGG
FANPGENSSISATAWAIMAIVAAGQDPHEWVKNGKSPIDFVRERLKDEMGTMGAEDYARTILALVYANENPRNFAGVDLV
GKLKSYMKENGQIGDFTYKTIWGIIALASVGENTTASAEWLKAQQDVDGGFAWSAGEESDFDDTAAAIEALIAAEEPRDS
DVIKKALDYLKTGQNDDGGMRYFGSSASNAASDAWTIQALVAAGVNPMEWAKNNTSVVEHLLSLQTEDGYFKYTKYQTSN
PGFMTVSAIIALLGKPHPIKVNASVATAPAITATTTTTATASTTTTTTTATTTTTAAAERKSTPGFSSAAAIAALALTAA
LLRRKT

Sequences:

>Translated_806_residues
MRLLAALFILLILTPASALTLDVSGGCVDKPVEVVTDKEATIVFRMNSGTPVFAEVSPSNPAYFKPRVPGELVVIAMAGD
EQVTKTLQVTTCSSGSSGGGGTTSKQYLPYGTFEVLGKEVEWRTAYGALKKASEIMGFSITPELTDWGIFVKCVRDLCKG
DIGETSGWMYWVNYPNEPLPGVAATEKRVYPGDRIVWYFSRSMSDTPDSSPFKIYIDIGDSYEITVSIIWPSKIPPVADF
TFSPANPVAGEEVVFNASKSVDDGQITDYIWNFGDGKSGRGVSVTHIYSEPGTYEVSLTVFDNDALSDTITKAVNVSEPG
IHLNLTGQVITIQPGKTKVIPSEQLMTNLSITGLTFESEKPVQVVIAESHIPPGVVYGTFYRWFEITANDSLKATIDFRV
PKDVAEGREVVLMKYNGSWFELPTEKTGKDENYLYYSAETESLSVIAITIKWDSFPLNVTDARIQKALDWLRTIQNDDGG
FANPGENSSISATAWAIMAIVAAGQDPHEWVKNGKSPIDFVRERLKDEMGTMGAEDYARTILALVYANENPRNFAGVDLV
GKLKSYMKENGQIGDFTYKTIWGIIALASVGENTTASAEWLKAQQDVDGGFAWSAGEESDFDDTAAAIEALIAAEEPRDS
DVIKKALDYLKTGQNDDGGMRYFGSSASNAASDAWTIQALVAAGVNPMEWAKNNTSVVEHLLSLQTEDGYFKYTKYQTSN
PGFMTVSAIIALLGKPHPIKVNASVATAPAITATTTTTATASTTTTTTTATTTTTAAAERKSTPGFSSAAAIAALALTAA
LLRRKT
>Mature_806_residues
MRLLAALFILLILTPASALTLDVSGGCVDKPVEVVTDKEATIVFRMNSGTPVFAEVSPSNPAYFKPRVPGELVVIAMAGD
EQVTKTLQVTTCSSGSSGGGGTTSKQYLPYGTFEVLGKEVEWRTAYGALKKASEIMGFSITPELTDWGIFVKCVRDLCKG
DIGETSGWMYWVNYPNEPLPGVAATEKRVYPGDRIVWYFSRSMSDTPDSSPFKIYIDIGDSYEITVSIIWPSKIPPVADF
TFSPANPVAGEEVVFNASKSVDDGQITDYIWNFGDGKSGRGVSVTHIYSEPGTYEVSLTVFDNDALSDTITKAVNVSEPG
IHLNLTGQVITIQPGKTKVIPSEQLMTNLSITGLTFESEKPVQVVIAESHIPPGVVYGTFYRWFEITANDSLKATIDFRV
PKDVAEGREVVLMKYNGSWFELPTEKTGKDENYLYYSAETESLSVIAITIKWDSFPLNVTDARIQKALDWLRTIQNDDGG
FANPGENSSISATAWAIMAIVAAGQDPHEWVKNGKSPIDFVRERLKDEMGTMGAEDYARTILALVYANENPRNFAGVDLV
GKLKSYMKENGQIGDFTYKTIWGIIALASVGENTTASAEWLKAQQDVDGGFAWSAGEESDFDDTAAAIEALIAAEEPRDS
DVIKKALDYLKTGQNDDGGMRYFGSSASNAASDAWTIQALVAAGVNPMEWAKNNTSVVEHLLSLQTEDGYFKYTKYQTSN
PGFMTVSAIIALLGKPHPIKVNASVATAPAITATTTTTATASTTTTTTTATTTTTAAAERKSTPGFSSAAAIAALALTAA
LLRRKT

Specific function: Unknown

COG id: COG3291

COG function: function code R; FOG: PKD repeat

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 PKD domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022409
- InterPro:   IPR000601 [H]

Pfam domain/function: PF00801 PKD [H]

EC number: NA

Molecular weight: Translated: 87063; Mature: 87063

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS50093 PKD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLAALFILLILTPASALTLDVSGGCVDKPVEVVTDKEATIVFRMNSGTPVFAEVSPSN
CHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHEEECCCEEEEEEECCCCEEEEEECCCC
PAYFKPRVPGELVVIAMAGDEQVTKTLQVTTCSSGSSGGGGTTSKQYLPYGTFEVLGKEV
CCEECCCCCCCEEEEEEECCHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCC
EWRTAYGALKKASEIMGFSITPELTDWGIFVKCVRDLCKGDIGETSGWMYWVNYPNEPLP
CHHHHHHHHHHHHHHHCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC
GVAATEKRVYPGDRIVWYFSRSMSDTPDSSPFKIYIDIGDSYEITVSIIWPSKIPPVADF
CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCCC
TFSPANPVAGEEVVFNASKSVDDGQITDYIWNFGDGKSGRGVSVTHIYSEPGTYEVSLTV
CCCCCCCCCCCEEEEECCCCCCCCCHHHHEEECCCCCCCCCEEEEEEECCCCEEEEEEEE
FDNDALSDTITKAVNVSEPGIHLNLTGQVITIQPGKTKVIPSEQLMTNLSITGLTFESEK
ECCCCHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCEECCCHHHHHHEEEEEEEEECCCC
PVQVVIAESHIPPGVVYGTFYRWFEITANDSLKATIDFRVPKDVAEGREVVLMKYNGSWF
CEEEEEECCCCCCCEEEECEEEEEEEECCCCEEEEEEEECCHHHHCCCEEEEEEECCCEE
ELPTEKTGKDENYLYYSAETESLSVIAITIKWDSFPLNVTDARIQKALDWLRTIQNDDGG
ECCCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCC
FANPGENSSISATAWAIMAIVAAGQDPHEWVKNGKSPIDFVRERLKDEMGTMGAEDYART
CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHH
ILALVYANENPRNFAGVDLVGKLKSYMKENGQIGDFTYKTIWGIIALASVGENTTASAEW
EEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHH
LKAQQDVDGGFAWSAGEESDFDDTAAAIEALIAAEEPRDSDVIKKALDYLKTGQNDDGGM
HHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCE
RYFGSSASNAASDAWTIQALVAAGVNPMEWAKNNTSVVEHLLSLQTEDGYFKYTKYQTSN
EEECCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEECCC
PGFMTVSAIIALLGKPHPIKVNASVATAPAITATTTTTATASTTTTTTTATTTTTAAAER
CCEEHHHHHHHHHCCCCCEEEECCEECCCEEEEEEECEEECCCCEEEEEEEEEEHHHHHC
KSTPGFSSAAAIAALALTAALLRRKT
CCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRLLAALFILLILTPASALTLDVSGGCVDKPVEVVTDKEATIVFRMNSGTPVFAEVSPSN
CHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHEEECCCEEEEEEECCCCEEEEEECCCC
PAYFKPRVPGELVVIAMAGDEQVTKTLQVTTCSSGSSGGGGTTSKQYLPYGTFEVLGKEV
CCEECCCCCCCEEEEEEECCHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCC
EWRTAYGALKKASEIMGFSITPELTDWGIFVKCVRDLCKGDIGETSGWMYWVNYPNEPLP
CHHHHHHHHHHHHHHHCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC
GVAATEKRVYPGDRIVWYFSRSMSDTPDSSPFKIYIDIGDSYEITVSIIWPSKIPPVADF
CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCCC
TFSPANPVAGEEVVFNASKSVDDGQITDYIWNFGDGKSGRGVSVTHIYSEPGTYEVSLTV
CCCCCCCCCCCEEEEECCCCCCCCCHHHHEEECCCCCCCCCEEEEEEECCCCEEEEEEEE
FDNDALSDTITKAVNVSEPGIHLNLTGQVITIQPGKTKVIPSEQLMTNLSITGLTFESEK
ECCCCHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCEECCCHHHHHHEEEEEEEEECCCC
PVQVVIAESHIPPGVVYGTFYRWFEITANDSLKATIDFRVPKDVAEGREVVLMKYNGSWF
CEEEEEECCCCCCCEEEECEEEEEEEECCCCEEEEEEEECCHHHHCCCEEEEEEECCCEE
ELPTEKTGKDENYLYYSAETESLSVIAITIKWDSFPLNVTDARIQKALDWLRTIQNDDGG
ECCCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCC
FANPGENSSISATAWAIMAIVAAGQDPHEWVKNGKSPIDFVRERLKDEMGTMGAEDYART
CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHH
ILALVYANENPRNFAGVDLVGKLKSYMKENGQIGDFTYKTIWGIIALASVGENTTASAEW
EEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHH
LKAQQDVDGGFAWSAGEESDFDDTAAAIEALIAAEEPRDSDVIKKALDYLKTGQNDDGGM
HHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCE
RYFGSSASNAASDAWTIQALVAAGVNPMEWAKNNTSVVEHLLSLQTEDGYFKYTKYQTSN
EEECCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEECCC
PGFMTVSAIIALLGKPHPIKVNASVATAPAITATTTTTATASTTTTTTTATTTTTAAAER
CCEEHHHHHHHHHCCCCCEEEECCEECCCEEEEEEECEEECCCCEEEEEEEEEEHHHHHC
KSTPGFSSAAAIAALALTAALLRRKT
CCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]