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The map label for this gene is vhuD

Identifier: 11498970

GI number: 11498970

Start: 1226414

End: 1226818

Strand: Reverse

Name: vhuD

Synonym: AF1374

Alternate gene names: 11498970

Gene position: 1226818-1226414 (Counterclockwise)

Preceding gene: 11498971

Following gene: 11498969

Centisome position: 56.32

GC content: 50.86

Gene sequence:

>405_bases
ATGAAAATTATCGGTTTTGCCTGTCAGTGGTGCGCCTATCAGGCCGCTGATTTGGCGGGTAGCTTGAAAATGAAGTATCC
TGAAAGCATCAGACTTCTGAGAGTTCCGTGTTCTGGGAGGGTTAATGCTGAGTTCATCCTGAAAGCTTTGCTCAGCGGTG
CAGACGGTGTTTTCGTTGCCGGCTGCCCCATCTCCGAGTGCCACTATAGGAGCGGAAACAGGATTGCGAAGACGAAGGTA
GCTCTCCTGAAAAGGCTCCTTCCGGAGTTTGGTCTTGAATCCGGGAGAGTTGAGTTTCTGCAGGTTTCCAGCGCTGATGC
GAGGAAGTTTGTGGAGTTTGCAAAGGAGTTTGATGAGAGAATCCGCAAGCTCGGACCAAATCCGCTGAGGAGGGATGAAA
GATGA

Upstream 100 bases:

>100_bases
AGCTTCTCGCCATCTGCTTGGGCAGCAATCCGGAAAAGGTGGCGAGAATCAGCTCCGTTGACAGAAGCAAGATTATTTCG
GAAATTCTGGAGGGGAGAGA

Downstream 100 bases:

>100_bases
TAGACGTGGCTTTTTACATTGCTCACGGCTGTTCGGGATGCACGATGTCCATGCTTGATCTAGGCGAGAGGATGAACGAT
TTCAGAATGAGGGTTGCGTG

Product: methylviologen-reducing hydrogenase, subunit delta (vhuD)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MKIIGFACQWCAYQAADLAGSLKMKYPESIRLLRVPCSGRVNAEFILKALLSGADGVFVAGCPISECHYRSGNRIAKTKV
ALLKRLLPEFGLESGRVEFLQVSSADARKFVEFAKEFDERIRKLGPNPLRRDER

Sequences:

>Translated_134_residues
MKIIGFACQWCAYQAADLAGSLKMKYPESIRLLRVPCSGRVNAEFILKALLSGADGVFVAGCPISECHYRSGNRIAKTKV
ALLKRLLPEFGLESGRVEFLQVSSADARKFVEFAKEFDERIRKLGPNPLRRDER
>Mature_134_residues
MKIIGFACQWCAYQAADLAGSLKMKYPESIRLLRVPCSGRVNAEFILKALLSGADGVFVAGCPISECHYRSGNRIAKTKV
ALLKRLLPEFGLESGRVEFLQVSSADARKFVEFAKEFDERIRKLGPNPLRRDER

Specific function: Part of a complex that provides reducing equivalents for heterodisulfide reductase. MvhD may form the contact site for heterodisulfide reductase [H]

COG id: COG1908

COG function: function code C; Coenzyme F420-reducing hydrogenase, delta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mvhD/vhuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003813 [H]

Pfam domain/function: PF02662 FlpD [H]

EC number: NA

Molecular weight: Translated: 15008; Mature: 15008

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIGFACQWCAYQAADLAGSLKMKYPESIRLLRVPCSGRVNAEFILKALLSGADGVFVA
CCEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEE
GCPISECHYRSGNRIAKTKVALLKRLLPEFGLESGRVEFLQVSSADARKFVEFAKEFDER
CCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHH
IRKLGPNPLRRDER
HHHCCCCCCCCCCC
>Mature Secondary Structure
MKIIGFACQWCAYQAADLAGSLKMKYPESIRLLRVPCSGRVNAEFILKALLSGADGVFVA
CCEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEE
GCPISECHYRSGNRIAKTKVALLKRLLPEFGLESGRVEFLQVSSADARKFVEFAKEFDER
CCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHH
IRKLGPNPLRRDER
HHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA