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Identifier: 11498878

GI number: 11498878

Start: 1140948

End: 1141697

Strand: Reverse

Name: Not Available

Synonym: AF1279

Alternate gene names: NA

Gene position: 1141697-1140948 (Counterclockwise)

Preceding gene: 11498879

Following gene: 11498877

Centisome position: 52.41

GC content: 48.53

Gene sequence:

>750_bases
ATGCAGCCCGATGTGAGGCACTCTCCGAAAGAGGCCTTTGAGTTCGCCGCAAACAACGGTTTCACCCATGTCGAGATTCT
GATGGACCACCCCCTCTACTCTCTTGAAAATCTGAGCTTTGCTGAGGTAATTGAGTTGAAGTGGAGCTATGATCTGGACT
TGCTCATCCACGCCCCGGCAACGAGCACGAACTTCATTTCGATAAGCAATGAGATGAGAAAGGCCAGCTACAAGGAGATG
AGCAAGGTCTGCTACTTTGCCGAGAAGTGCGGGGCGGAGGTGGTGACGTTCCACATAGGCTGGAATCCGGCCTTCATAAA
CAACGGCAATTTCTACTTCAACAAATCCCTTTTCGACAGGCACAACGAGAGCGTTCTGTTGAATGAGTTCCTGCCCTTCG
TAAAAACCTGCCCAGTTCAGCTCGCTCTCGAAAACACTATCATGATAGAAGACGGTCTGGAGAGGGCTTTGAATGAGATA
ATGGGCAAAACCACACTCGGGCTCACGATAGACGTAGGGCACTACAACATACGGGAAAACCCCTTCTTCCTCAAAAACTT
CGACAGAGTTGTTAACATGCACCTGCACGACAACGACGGCACCGCAGACCAGCATTTAGCTCTCGGCCGCGGAACTGTTG
ATTTGAGTAAATTCAACCTGAACAGATACACAGGTTTTTTAACCATTGAGACAAGAGAGGAAAAATCCATAATTGAAAGC
AGGGATTACCTGATGAGGGTGATTGTATGA

Upstream 100 bases:

>100_bases
ACATAATCGACGGCTCACGTCCCCATTCCATACTGATAGAGCTTTTCACTAAAGAGGGAATCGGGACGATGGTGGAACCG
TGATATCGGCGAAGCTCGGA

Downstream 100 bases:

>100_bases
AGGCAAGAGAGGTTGAGTTTGAGGGGCATCTGATTGACTCCATGATTTTTACGAAGGCACTGGACATTATACTCGACCTT
GATGGCGAGTTCGAGATTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MQPDVRHSPKEAFEFAANNGFTHVEILMDHPLYSLENLSFAEVIELKWSYDLDLLIHAPATSTNFISISNEMRKASYKEM
SKVCYFAEKCGAEVVTFHIGWNPAFINNGNFYFNKSLFDRHNESVLLNEFLPFVKTCPVQLALENTIMIEDGLERALNEI
MGKTTLGLTIDVGHYNIRENPFFLKNFDRVVNMHLHDNDGTADQHLALGRGTVDLSKFNLNRYTGFLTIETREEKSIIES
RDYLMRVIV

Sequences:

>Translated_249_residues
MQPDVRHSPKEAFEFAANNGFTHVEILMDHPLYSLENLSFAEVIELKWSYDLDLLIHAPATSTNFISISNEMRKASYKEM
SKVCYFAEKCGAEVVTFHIGWNPAFINNGNFYFNKSLFDRHNESVLLNEFLPFVKTCPVQLALENTIMIEDGLERALNEI
MGKTTLGLTIDVGHYNIRENPFFLKNFDRVVNMHLHDNDGTADQHLALGRGTVDLSKFNLNRYTGFLTIETREEKSIIES
RDYLMRVIV
>Mature_249_residues
MQPDVRHSPKEAFEFAANNGFTHVEILMDHPLYSLENLSFAEVIELKWSYDLDLLIHAPATSTNFISISNEMRKASYKEM
SKVCYFAEKCGAEVVTFHIGWNPAFINNGNFYFNKSLFDRHNESVLLNEFLPFVKTCPVQLALENTIMIEDGLERALNEI
MGKTTLGLTIDVGHYNIRENPFFLKNFDRVVNMHLHDNDGTADQHLALGRGTVDLSKFNLNRYTGFLTIETREEKSIIES
RDYLMRVIV

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1614 and MJ0008 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 28651; Mature: 28651

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPDVRHSPKEAFEFAANNGFTHVEILMDHPLYSLENLSFAEVIELKWSYDLDLLIHAPA
CCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCHHCCCCHHHEEEEEECCCEEEEEECCC
TSTNFISISNEMRKASYKEMSKVCYFAEKCGAEVVTFHIGWNPAFINNGNFYFNKSLFDR
CCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCEEEECHHHHC
HNESVLLNEFLPFVKTCPVQLALENTIMIEDGLERALNEIMGKTTLGLTIDVGHYNIREN
CCCEEEHHHHHHHHHCCCEEEEECCEEEEHHHHHHHHHHHHCCEEEEEEEECCCEECCCC
PFFLKNFDRVVNMHLHDNDGTADQHLALGRGTVDLSKFNLNRYTGFLTIETREEKSIIES
CCHHCCCCEEEEEEEECCCCCCCCEEEECCCEEEEEEEECCCEEEEEEEEECHHHHHHHH
RDYLMRVIV
HHHHHEECC
>Mature Secondary Structure
MQPDVRHSPKEAFEFAANNGFTHVEILMDHPLYSLENLSFAEVIELKWSYDLDLLIHAPA
CCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCHHCCCCHHHEEEEEECCCEEEEEECCC
TSTNFISISNEMRKASYKEMSKVCYFAEKCGAEVVTFHIGWNPAFINNGNFYFNKSLFDR
CCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCEEEECHHHHC
HNESVLLNEFLPFVKTCPVQLALENTIMIEDGLERALNEIMGKTTLGLTIDVGHYNIREN
CCCEEEHHHHHHHHHCCCEEEEECCEEEEHHHHHHHHHHHHCCEEEEEEEECCCEECCCC
PFFLKNFDRVVNMHLHDNDGTADQHLALGRGTVDLSKFNLNRYTGFLTIETREEKSIIES
CCHHCCCCEEEEEEEECCCCCCCCEEEECCCEEEEEEEECCCEEEEEEEEECHHHHHHHH
RDYLMRVIV
HHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]