| Definition | Archaeoglobus fulgidus DSM 4304, complete genome. |
|---|---|
| Accession | NC_000917 |
| Length | 2,178,400 |
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The map label for this gene is lldD
Identifier: 11498413
GI number: 11498413
Start: 717638
End: 718738
Strand: Reverse
Name: lldD
Synonym: AF0807
Alternate gene names: 11498413
Gene position: 718738-717638 (Counterclockwise)
Preceding gene: 11498419
Following gene: 11498411
Centisome position: 32.99
GC content: 47.14
Gene sequence:
>1101_bases GTGGAGCGTTACAACAAGAGGGTCGGTGCTGACGTTCCCCTTACCAAGGATTTTCTCAAGCTCTTTTGTTATCTTCATTA CATTACAAAGATCATTGAAACAATTTGGTTTTGGGGTTCATATGTTTACCATATCTTTTATATTTTTTTAGAGCGTGCTG GTAACATGAAAACGATAGACGAGCTTGTTGAAAGCGCCAGACAGATACTTCAGGAAAGGGATGTGAACATAGAGGTTTTA GAGGGGGGTACGGAGAGGGGGTTGACGGTAAGGAGAAACAGAGAGATTTTAGACTCCATCGGAATAAAAATGAACCTCCT ATCAGACTTCGAACCTTCTTTGGAAACGGAATTTCTCGGAAGGAAGATTTCCATGCCTGTTATGCCGGCCCCGCTTTCAG GGCTGGTAAAATCTGTGGATGCCAACTGTTTTAAGAGAATAATCCGCGAAGCGTGGGAGGCGGGGGTTGTTCCGTGGATA GGCCATCCTATTCAGGATGATGTTTCGGAATTCGAGAAGGAGTTCGTCTGGATTATCAAGCCTCTCAGAAACACCAAGAG AGTGTACGATGATGTTGAGAAGGCAGAATCGTCAAAGGCCATGGCAATTGGCATGGACATTGACTCTGCAGCGGGAATAA AGGTTGGGGGGACAATTCTGAGCTACGGGGGAACTAAGGTGTGGAGCAAGAAGGAGCTTGCTGACCTCGCCTCCACGACG AAGTTGCCATTCATCGTCAAGGGGGTTCTCAGTGAGAGGGATTACTACTCACTCGCCGACATTAGCTCTGCCATTGTCGT CTCGAATCACGGCGGGAGGGTGCTCGATTCGGCTATTTCTCCGCTCGAACTTCTGCCATACTTAGAGAAAGTGGTTCCAA CCGGTGTTGACAGCGGCTTCAGGTACGGCTCGGATGTGTTCAAGGCCTTAGCTCTGGGAGCCGATTTCGTCCTTTTTGGC AGACTCATGGTTTACGCGCTTGCAATTGAAAACGGAGTTCAGACTGCTTTAAACATGATCAGGGATGAGCTTTTGAGGAT TATGAAGCTCACGGGAGCGAAAAGTGTGAAAGAAATAAGTAAAGAAGCTGTTGTGCTTTAA
Upstream 100 bases:
>100_bases TGTTCTCGTAGCAGAGTTTTGCAATCCTCGCAACCTGCTCCGTATTTTCCGGAAAAACTACCGCAGTTGCGTTACCGGCT TTTCCAATAGCATCAGTCGA
Downstream 100 bases:
>100_bases TTTTTTTAAATCATTTGTATTTTCAGGATGAAGACTGCTATCGCCGCCACCACGCTGACAACTATTGCGTAAATCGTTGC CGGCACGAGGTTCTTCCTGA
Product: L-lactate dehydrogenase, cytochrome-type (lldD)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MERYNKRVGADVPLTKDFLKLFCYLHYITKIIETIWFWGSYVYHIFYIFLERAGNMKTIDELVESARQILQERDVNIEVL EGGTERGLTVRRNREILDSIGIKMNLLSDFEPSLETEFLGRKISMPVMPAPLSGLVKSVDANCFKRIIREAWEAGVVPWI GHPIQDDVSEFEKEFVWIIKPLRNTKRVYDDVEKAESSKAMAIGMDIDSAAGIKVGGTILSYGGTKVWSKKELADLASTT KLPFIVKGVLSERDYYSLADISSAIVVSNHGGRVLDSAISPLELLPYLEKVVPTGVDSGFRYGSDVFKALALGADFVLFG RLMVYALAIENGVQTALNMIRDELLRIMKLTGAKSVKEISKEAVVL
Sequences:
>Translated_366_residues MERYNKRVGADVPLTKDFLKLFCYLHYITKIIETIWFWGSYVYHIFYIFLERAGNMKTIDELVESARQILQERDVNIEVL EGGTERGLTVRRNREILDSIGIKMNLLSDFEPSLETEFLGRKISMPVMPAPLSGLVKSVDANCFKRIIREAWEAGVVPWI GHPIQDDVSEFEKEFVWIIKPLRNTKRVYDDVEKAESSKAMAIGMDIDSAAGIKVGGTILSYGGTKVWSKKELADLASTT KLPFIVKGVLSERDYYSLADISSAIVVSNHGGRVLDSAISPLELLPYLEKVVPTGVDSGFRYGSDVFKALALGADFVLFG RLMVYALAIENGVQTALNMIRDELLRIMKLTGAKSVKEISKEAVVL >Mature_366_residues MERYNKRVGADVPLTKDFLKLFCYLHYITKIIETIWFWGSYVYHIFYIFLERAGNMKTIDELVESARQILQERDVNIEVL EGGTERGLTVRRNREILDSIGIKMNLLSDFEPSLETEFLGRKISMPVMPAPLSGLVKSVDANCFKRIIREAWEAGVVPWI GHPIQDDVSEFEKEFVWIIKPLRNTKRVYDDVEKAESSKAMAIGMDIDSAAGIKVGGTILSYGGTKVWSKKELADLASTT KLPFIVKGVLSERDYYSLADISSAIVVSNHGGRVLDSAISPLELLPYLEKVVPTGVDSGFRYGSDVFKALALGADFVLFG RLMVYALAIENGVQTALNMIRDELLRIMKLTGAKSVKEISKEAVVL
Specific function: Unknown
COG id: COG1304
COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FMN hydroxy acid dehydrogenase domain [H]
Homologues:
Organism=Homo sapiens, GI54234014, Length=326, Percent_Identity=28.5276073619632, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI7705393, Length=326, Percent_Identity=28.5276073619632, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI11068137, Length=136, Percent_Identity=39.7058823529412, Blast_Score=82, Evalue=6e-16, Organism=Escherichia coli, GI1790033, Length=130, Percent_Identity=43.0769230769231, Blast_Score=94, Evalue=1e-20, Organism=Caenorhabditis elegans, GI193208036, Length=137, Percent_Identity=37.956204379562, Blast_Score=85, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6323587, Length=162, Percent_Identity=38.2716049382716, Blast_Score=94, Evalue=3e-20, Organism=Drosophila melanogaster, GI78707188, Length=142, Percent_Identity=37.3239436619718, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI281363140, Length=148, Percent_Identity=37.1621621621622, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI78707190, Length=148, Percent_Identity=37.1621621621622, Blast_Score=86, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR012133 - InterPro: IPR000262 - InterPro: IPR008259 - InterPro: IPR020920 [H]
Pfam domain/function: PF01070 FMN_dh [H]
EC number: =1.1.2.3 [H]
Molecular weight: Translated: 41016; Mature: 41016
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERYNKRVGADVPLTKDFLKLFCYLHYITKIIETIWFWGSYVYHIFYIFLERAGNMKTID CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ELVESARQILQERDVNIEVLEGGTERGLTVRRNREILDSIGIKMNLLSDFEPSLETEFLG HHHHHHHHHHHHCCCCEEEECCCCCCCCEECCCHHHHHHCCCEEEHHHCCCCCHHHHHHC RKISMPVMPAPLSGLVKSVDANCFKRIIREAWEAGVVPWIGHPIQDDVSEFEKEFVWIIK CCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH PLRNTKRVYDDVEKAESSKAMAIGMDIDSAAGIKVGGTILSYGGTKVWSKKELADLASTT HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEECCEEEECCCCCCCCHHHHHHHHHHC KLPFIVKGVLSERDYYSLADISSAIVVSNHGGRVLDSAISPLELLPYLEKVVPTGVDSGF CCHHHHHHHHCCCCCHHHHHHCCEEEEECCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCC RYGSDVFKALALGADFVLFGRLMVYALAIENGVQTALNMIRDELLRIMKLTGAKSVKEIS CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH KEAVVL HHHCCC >Mature Secondary Structure MERYNKRVGADVPLTKDFLKLFCYLHYITKIIETIWFWGSYVYHIFYIFLERAGNMKTID CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ELVESARQILQERDVNIEVLEGGTERGLTVRRNREILDSIGIKMNLLSDFEPSLETEFLG HHHHHHHHHHHHCCCCEEEECCCCCCCCEECCCHHHHHHCCCEEEHHHCCCCCHHHHHHC RKISMPVMPAPLSGLVKSVDANCFKRIIREAWEAGVVPWIGHPIQDDVSEFEKEFVWIIK CCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH PLRNTKRVYDDVEKAESSKAMAIGMDIDSAAGIKVGGTILSYGGTKVWSKKELADLASTT HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEECCEEEECCCCCCCCHHHHHHHHHHC KLPFIVKGVLSERDYYSLADISSAIVVSNHGGRVLDSAISPLELLPYLEKVVPTGVDSGF CCHHHHHHHHCCCCCHHHHHHCCEEEEECCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCC RYGSDVFKALALGADFVLFGRLMVYALAIENGVQTALNMIRDELLRIMKLTGAKSVKEIS CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH KEAVVL HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA