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Identifier: 11497956

GI number: 11497956

Start: 314765

End: 315142

Strand: Reverse

Name: Not Available

Synonym: AF0344

Alternate gene names: NA

Gene position: 315142-314765 (Counterclockwise)

Preceding gene: 11497957

Following gene: 11497955

Centisome position: 14.47

GC content: 54.76

Gene sequence:

>378_bases
ATGGAACTGTTTCAGACTGCAGACTGGAAGAAGGAGAAGCACGTGCCAGTAATTGAGGTTTTAAGGGCTGAGGGCGGAGT
TGTGGAGGTAAAGGTCAGCGTTGGGAAGGAAATCCCGCATCCGAACACAACCGAGCACCACATTGCGTGGATAGAGCTTG
TATTTCAGCCTGAAGGCAGCAAGTTCCCCTACGTAGTTGGCAGGGCAGAGTTTGCCGCCCACGGGGCTTCAGTTGACGGC
CCGAACACGAGTGGTGTTTACACCGATCCGGTTGCGGTGTTCGCCTTCAAAGCTGAGAAATCCGGGAAGCTTACGGCCTT
CTCCTACTGCAACATCCATGGCCTCTGGATGGGAGAGGCGACGCTAAGCTTGGAGTGA

Upstream 100 bases:

>100_bases
TGATTTACAGCCAGTTTAGCGATATTAATTCGTAAATACGAAATTCGAACATAGAAAGGTTTATTAGGGAAGAAATTTTA
AAGGTAAGGGAGGTGATAGC

Downstream 100 bases:

>100_bases
TTGAATGGCCAGGATTCTTGTTATTTTTCATTCCATCACGGGCAACACGATGAAGCTCGCAAAGGCCGTTGCTGATGGTG
CGAGGGAAGGAGGAGCGGAG

Product: desulfoferrodoxin, putative

Products: NA

Alternate protein names: SOR

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MELFQTADWKKEKHVPVIEVLRAEGGVVEVKVSVGKEIPHPNTTEHHIAWIELVFQPEGSKFPYVVGRAEFAAHGASVDG
PNTSGVYTDPVAVFAFKAEKSGKLTAFSYCNIHGLWMGEATLSLE

Sequences:

>Translated_125_residues
MELFQTADWKKEKHVPVIEVLRAEGGVVEVKVSVGKEIPHPNTTEHHIAWIELVFQPEGSKFPYVVGRAEFAAHGASVDG
PNTSGVYTDPVAVFAFKAEKSGKLTAFSYCNIHGLWMGEATLSLE
>Mature_125_residues
MELFQTADWKKEKHVPVIEVLRAEGGVVEVKVSVGKEIPHPNTTEHHIAWIELVFQPEGSKFPYVVGRAEFAAHGASVDG
PNTSGVYTDPVAVFAFKAEKSGKLTAFSYCNIHGLWMGEATLSLE

Specific function: Uses electrons from reduced NADP, by way of rubredoxin and an oxidoreductase, to catalyze the reduction of superoxide to hydrogen peroxide

COG id: COG2033

COG function: function code C; Desulfoferrodoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the desulfoferrodoxin family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SOR_ARCFU (O29903)

Other databases:

- EMBL:   AE000782
- PIR:   H69292
- RefSeq:   NP_069180.1
- ProteinModelPortal:   O29903
- SMR:   O29903
- GeneID:   1483558
- GenomeReviews:   AE000782_GR
- KEGG:   afu:AF0344
- NMPDR:   fig|224325.1.peg.339
- TIGR:   AF_0344
- HOGENOM:   HBG541098
- OMA:   EHHIAWI
- ProtClustDB:   CLSK2746387
- BioCyc:   AFUL224325:AF_0344-MONOMER
- BRENDA:   1.15.1.2
- GO:   GO:0006810
- InterPro:   IPR002742
- TIGRFAMs:   TIGR00332

Pfam domain/function: PF01880 Desulfoferrodox; SSF49367 Desulfoferrodox

EC number: =1.15.1.2

Molecular weight: Translated: 13696; Mature: 13696

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELFQTADWKKEKHVPVIEVLRAEGGVVEVKVSVGKEIPHPNTTEHHIAWIELVFQPEGS
CCCCCCCCCCCCCCCCHHEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCC
KFPYVVGRAEFAAHGASVDGPNTSGVYTDPVAVFAFKAEKSGKLTAFSYCNIHGLWMGEA
CCCEEEECCCEEECCCCCCCCCCCCEEECCEEEEEEECCCCCCEEEEEECCEEEEEECCE
TLSLE
EEEEC
>Mature Secondary Structure
MELFQTADWKKEKHVPVIEVLRAEGGVVEVKVSVGKEIPHPNTTEHHIAWIELVFQPEGS
CCCCCCCCCCCCCCCCHHEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCC
KFPYVVGRAEFAAHGASVDGPNTSGVYTDPVAVFAFKAEKSGKLTAFSYCNIHGLWMGEA
CCCEEEECCCEEECCCCCCCCCCCCEEECCEEEEEEECCCCCCEEEEEECCEEEEEECCE
TLSLE
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475