| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800555
Identifier: 114800555
GI number: 114800555
Start: 3059132
End: 3060070
Strand: Reverse
Name: 114800555
Synonym: HNE_2903
Alternate gene names: NA
Gene position: 3060070-3059132 (Counterclockwise)
Preceding gene: 114799764
Following gene: 114798568
Centisome position: 82.59
GC content: 64.32
Gene sequence:
>939_bases ATGACCGGGATCGAATTTGGCGATCCGATCAAGCCGTTTGCCGCCATCTGGCTTCACGCGACCGGCTTCAATGCCATGAC CTATCAATCGCTGCTGGCGCCGCTGGGCCTGCGGGCCCGCATTGGCGCGCTGGACATGCGCGGGCATGGGCGCACGACGA TCCCGACCAAAGGCGGGCTTTCCAGCTGGAACCGCTACCGCGACGATGTGATCGAGTTTCTGGAGAAGGAAGCGCCGCAG GGCGTTGTGCTGGGCGGCCATTCGATGGGTGGCTGTGTGGCGCTGCTGGTGGCGGGTAAGCGGCCGGATTTGGTGAAGGG GCTTGTGCTGGCTGATCCGGTAATCCTTGCCCGGAAGACCTATTTCTGGAACCATGTGTTTCCCCCCTATAACTGGCTGT TTGCGCGCAACAAGATGGCCTCGCGCGCCAAGAAGCGCCGGGCCGAATTCGGATCGTTCCGCGAGGCGCTCAGTTCCTAT AATGGCCGCGGGGCGTTCCAGTCCTGGCGCGAGCCGTTCCTGGCGGACTATCTGCTGGACGGGATCGACCGGGTGGATAC CGGCCCGCAGGACGCCGAAAACCAGCGCTGGGCGCTGACCTGTACGCCGGCTTGGGAAGCCAAGACCTTTGGCGCGCAGC GCCATGCGCCCTGGGCGGCGCTGAAGAAGGTGCGCCAGAAGAAAATTCCTATCGTCATCATGCGTCCCAACCGGGACTCG GTGATTTCCGGAAAGGTCCGGGCGCAGATCATCCAGCAGAATCCGTCGCTGATGATGCGCGGCATTCGCGGCACATCGCA TTTCCTGCCGATGGAAGCGCCGTATGAAATCCGCGACCAGCTGTCGGCGTTCATTGCGCGGCTGGTGGAGCGGTTTACGC TGGAGGAGGACGCGCCGGTGGAGCGCGGTCTGCGCCAGCGGCGGCGCCGGGCGGGGTAG
Upstream 100 bases:
>100_bases GGGAGGCGCAGGTGGGGGTATCTTTTGAGGCAACGCGTGTGCGCGGCGGGGATACCTGCTGATGCGCCGTTTCCGGGAAG AGATGAAATCGGGCGGCGAG
Downstream 100 bases:
>100_bases GGCGGTTTCTGGCAGCGCTTGCGGCCGGAACGCGCGCTGTTTAGGGCGCGGCCGGTGCTTGCGTTTTTATTGATCGGATT TCCACCCGCTGCGCGCGGCT
Product: alpha/beta fold family hydrolase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Fold Superfamily Hydrolase; Alpha/Beta Hydrolase Superfamily Protein; Alpha/Beta Fold Hydrolase; Alpha/Beta Family Hydrolase; Alpha/Beta Hydrolase Fold-Containing Protein; Conserved Hydrolases Or Acyltransferase
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MTGIEFGDPIKPFAAIWLHATGFNAMTYQSLLAPLGLRARIGALDMRGHGRTTIPTKGGLSSWNRYRDDVIEFLEKEAPQ GVVLGGHSMGGCVALLVAGKRPDLVKGLVLADPVILARKTYFWNHVFPPYNWLFARNKMASRAKKRRAEFGSFREALSSY NGRGAFQSWREPFLADYLLDGIDRVDTGPQDAENQRWALTCTPAWEAKTFGAQRHAPWAALKKVRQKKIPIVIMRPNRDS VISGKVRAQIIQQNPSLMMRGIRGTSHFLPMEAPYEIRDQLSAFIARLVERFTLEEDAPVERGLRQRRRRAG
Sequences:
>Translated_312_residues MTGIEFGDPIKPFAAIWLHATGFNAMTYQSLLAPLGLRARIGALDMRGHGRTTIPTKGGLSSWNRYRDDVIEFLEKEAPQ GVVLGGHSMGGCVALLVAGKRPDLVKGLVLADPVILARKTYFWNHVFPPYNWLFARNKMASRAKKRRAEFGSFREALSSY NGRGAFQSWREPFLADYLLDGIDRVDTGPQDAENQRWALTCTPAWEAKTFGAQRHAPWAALKKVRQKKIPIVIMRPNRDS VISGKVRAQIIQQNPSLMMRGIRGTSHFLPMEAPYEIRDQLSAFIARLVERFTLEEDAPVERGLRQRRRRAG >Mature_311_residues TGIEFGDPIKPFAAIWLHATGFNAMTYQSLLAPLGLRARIGALDMRGHGRTTIPTKGGLSSWNRYRDDVIEFLEKEAPQG VVLGGHSMGGCVALLVAGKRPDLVKGLVLADPVILARKTYFWNHVFPPYNWLFARNKMASRAKKRRAEFGSFREALSSYN GRGAFQSWREPFLADYLLDGIDRVDTGPQDAENQRWALTCTPAWEAKTFGAQRHAPWAALKKVRQKKIPIVIMRPNRDSV ISGKVRAQIIQQNPSLMMRGIRGTSHFLPMEAPYEIRDQLSAFIARLVERFTLEEDAPVERGLRQRRRRAG
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35200; Mature: 35069
Theoretical pI: Translated: 10.97; Mature: 10.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGIEFGDPIKPFAAIWLHATGFNAMTYQSLLAPLGLRARIGALDMRGHGRTTIPTKGGL CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHCCEEEECCCCCCCCCCCCCH SSWNRYRDDVIEFLEKEAPQGVVLGGHSMGGCVALLVAGKRPDLVKGLVLADPVILARKT HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCCCCHHHHHHHHHCHHHHHHHH YFWNHVFPPYNWLFARNKMASRAKKRRAEFGSFREALSSYNGRGAFQSWREPFLADYLLD HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH GIDRVDTGPQDAENQRWALTCTPAWEAKTFGAQRHAPWAALKKVRQKKIPIVIMRPNRDS HHHHCCCCCCCCCCCCEEEEECCCCCHHHCCCCCCCCHHHHHHHHHHCCCEEEECCCCCC VISGKVRAQIIQQNPSLMMRGIRGTSHFLPMEAPYEIRDQLSAFIARLVERFTLEEDAPV EECHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH ERGLRQRRRRAG HHHHHHHHHHCC >Mature Secondary Structure TGIEFGDPIKPFAAIWLHATGFNAMTYQSLLAPLGLRARIGALDMRGHGRTTIPTKGGL CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHCCEEEECCCCCCCCCCCCCH SSWNRYRDDVIEFLEKEAPQGVVLGGHSMGGCVALLVAGKRPDLVKGLVLADPVILARKT HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCCCCHHHHHHHHHCHHHHHHHH YFWNHVFPPYNWLFARNKMASRAKKRRAEFGSFREALSSYNGRGAFQSWREPFLADYLLD HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH GIDRVDTGPQDAENQRWALTCTPAWEAKTFGAQRHAPWAALKKVRQKKIPIVIMRPNRDS HHHHCCCCCCCCCCCCEEEEECCCCCHHHCCCCCCCCHHHHHHHHHHCCCEEEECCCCCC VISGKVRAQIIQQNPSLMMRGIRGTSHFLPMEAPYEIRDQLSAFIARLVERFTLEEDAPV EECHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH ERGLRQRRRRAG HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA