| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800527
Identifier: 114800527
GI number: 114800527
Start: 333338
End: 336214
Strand: Reverse
Name: 114800527
Synonym: HNE_0339
Alternate gene names: NA
Gene position: 336214-333338 (Counterclockwise)
Preceding gene: 114797646
Following gene: 114797790
Centisome position: 9.07
GC content: 69.69
Gene sequence:
>2877_bases GTGACAGCCATCGGGCCTTTCCTGCTGGGGGCGCCGCTGGCGCTGTTTGCACTGCTGGCGTTGCCGCTGATCTGGTGGGT GCTGCGGGCGACGCCGCCGGCGCCGAAGGAAGCGGAGCTACCTTCGCTGCGCCTTCTGGAGGGCGCCGAGCCGGTGGAAG AGACGCCCGCGCGTACGCCCTGGTGGGTGTGGCTGATCCGTACACTGGCAGTTATTGCCGCGATCCTGGGGCTTTCCCAG CCGGTCTGGGCGCCGGGCGCGCGCACGACGGAGGCGGGCGGCGGGCCGCTGCTGATCGTAATGGACAATGGCTGGGCCTC TGCCCCGCGCTGGAGCGAGCTGACCAATGCGGCGAGCGCGACGCTGGACGCGGGCGACCGCGACGGGGCGGTGCATCTGC TGCTGACCGCGCCGCGCCAGCTGAACGCAGACCCCGCCGAGCGATTGTCGCGCGCGGACATGGCGCGGCGGCTTTCCAGC CTTGATCCCCAGCCCTGGGCGACGGACCGGGTGGACGCGCTGGCGCGGCTGGACGCCTCGAAGCTGGCGCCCGCGCGTAT CTTTTATGCCAGCGACGGGCTGGAGACCGAGGGCGGCGCGGCCTTTGCCGCGGCCCTTGCTGCGCGCGCGCCGCTGACCG TGTTTGCCGCCCCGCCCGAGGGGCCAGCGGTGATTACCGGGCTTTCAGCGCAGACCGACGCGGTGACGGTGCGGCTGGCG CGGGCGGATACCGGCGGGACGGCGCGCGCCTTTGTTTCGGCGCTGACGCAGGATGGCTCGGCGCTGGGCTCTGCCGAGGC GGTGTTTGAGGCCGGCGCGCGGGAAGCCGAGGCGCAGTTTGCGATCCCGGCTGCCGCGCTGGCGCGGATTGCGCGGTTCA ATGTGACCGGACGGCCGGGCGCGGGCACGGTGTGGCTGTGGGATTCGGCGGAGCGGACGCGGCGCGTGGGCCTTGTGGAC GCGGGCGCCGAGGCCCAGCCCCTACTTTCGGACATGCACTATATCCGCAAGGCGCTGGAGCCGTTTGCGTCGATCTCCAC CGGGGACATCGAGACGCTGGTGGCAGCCGCCCCGGACGCGATCATTCTTTCCGATGTCGGACAGATACCGGCCGCCGACA CCGAGCGGCTGACAGAATGGGTGGAGAATGGCGGGGCGCTGATCCGGTTTGCCGGGCCAAGGCTGGCCGCGCAGGGCGAT GAGCTGTTGCCGGTGATGCTGCGGAGGTCTTCGCGCGCCATTGGCGGGGCGCTCGCCTGGGAGGAGCCGCAGGGGCTCGC CCCCTTCCCTGAAAACTCGCCCTTTGCGGGCCTGCCGGTACCCCCGGATGTGCGTGTACGCCAGCAGGTGCTGGCGCGGC CCGAGCCTGACCTTGCGCGCAAAACCTGGGCGCGGCTGACCGATGGCTCTCCGCTGGTGAGCGCCGACAGCCGGGGCGAT GGCACGCTGGTATTGTTTCACATCACCGCCGGGCCGGACTGGGGCGACCTCGCCTATTCGGGCGTATTCGAACAGATGCT GCGCCGGGCGATTGCGGCGGGACGCGGCGAAGCGGTGGAAGATGGCGACGGGACATACATGCCCCAGCTTTCCCTTGATG GCTTTGGCCGGCTGGAGCGGGCGAGCCAGAACGCCGCGCCGATCAAGGCGGCAGAATTTGCAGACATCGCGCCATCGGAA ACCCACCCGCCGGGGCTGTATCAGGGGCCATCAGGCTCCCGCGCGCTGAACATTGGCGCGGGCGCCGAGCCGCGCCTGAT GACGCAATGGCCAGCGTCTGCGCGCCTGCTGGGCGACGCGGAGGCGCGCTCGCTGCGCCTCGCCGGGCCGATGCTGGCGC TGGCGGCGGGGCTGCTTGCGCTGGACCTTTTCATCGCCTTGTTCGTGGCCGGACGGTTGCGCGGGCTGGGGCGACGCAGC AAGGCGCCAGGCAAGACAGCGGCCAAAACAACGGGAGGTGCGCTGGGCGCGCTCATCCTCGCTTTTGCGTTTATGCCGGG CGAGCCTGCCCAGGCACAGGGCTATGAACTGCGCCCCGATGGCAGCTACCGCGCGATCCCTTCGCCCTCCACCCGCGTGG TGCCCCTGCCCGAGGGCAAGGCGAGCCAGAAGCAAATCGACGCGGCGCTGGTGATGCGCTTTGGCTATATCGAGACAGCC GACCGGGCGCTGAACGAGCGGGCGCGGGCGGGCCTTCAGGGGCTTTCCAATATTCTGAACATGCGCACCTCGGTGGAGCC GGCTGAGCCCCATTCGCTGAACCTTGAGACCGACGCGCTGGAACTTTACCCGCTGATCTTTTTCGTGGTGCCGGAAAATG CCGGGCCGCTTTCGGAGACGGCGATTGGCCGGCTGAACGCCTATCTGCGGGCGGGCGGGGCGCTGGTGATTGATACACGC GCAGGCGGCGACGCGGCGGCGCAGACCGATGTGTCGAAGCTGGAGACGCTGCTGTCGGGGCTCGACGCGCCGCAGCTTCA GCCCGTGCCGGAAAACCATGTGCTGTCGCGCAGCTTTTACCTGATTGATGATTTCCCCGGACGCTTTGCCGGGCGGCGGC TCTGGATCGAGCAGACCGGGGAACCGGGCACAGCGCGGGGGGACGGCGTCTCGCGCCTGTTCATTGGCGACGCTGACTGG ATTTCGGCCTGGGCGGTGGACGCCGACGGGCGCGACCTTTACTCCGTAGACGGAGGTCCACAGCAGCGCGAAACCGCGCG GCGGTTTGGCGTCAATCTGGTGATGTATGTGCTGACCGGGAGCTACAAGGACGACCAGGTGCATATTCCGGCGCTGCTGG AGCGGCTGGGCGATCCCGATGCCGGTGAGCCTGAACCCCTGATGCCGGGGCGCATTCCCGATGGGGGGCCGCAATGA
Upstream 100 bases:
>100_bases CGCGGATGGGCTGGGCGCTGGTGACGCATGTGACGGGGAGCCCGGCGCTTTCCGCCGCCGCGCGCCTGAAGGCGGAGATT GAACGGTTCGGGGTGGCGCG
Downstream 100 bases:
>100_bases TTGATGCGGTGCGCCTGAGCCTTGAGCCTTTCCTCGGCTGGCCGCTGATCTGGGGGTTGGCGGCGCTGACGCTGGCGGCG TGGACGGCGTATTTCTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 958; Mature: 957
Protein sequence:
>958_residues MTAIGPFLLGAPLALFALLALPLIWWVLRATPPAPKEAELPSLRLLEGAEPVEETPARTPWWVWLIRTLAVIAAILGLSQ PVWAPGARTTEAGGGPLLIVMDNGWASAPRWSELTNAASATLDAGDRDGAVHLLLTAPRQLNADPAERLSRADMARRLSS LDPQPWATDRVDALARLDASKLAPARIFYASDGLETEGGAAFAAALAARAPLTVFAAPPEGPAVITGLSAQTDAVTVRLA RADTGGTARAFVSALTQDGSALGSAEAVFEAGAREAEAQFAIPAAALARIARFNVTGRPGAGTVWLWDSAERTRRVGLVD AGAEAQPLLSDMHYIRKALEPFASISTGDIETLVAAAPDAIILSDVGQIPAADTERLTEWVENGGALIRFAGPRLAAQGD ELLPVMLRRSSRAIGGALAWEEPQGLAPFPENSPFAGLPVPPDVRVRQQVLARPEPDLARKTWARLTDGSPLVSADSRGD GTLVLFHITAGPDWGDLAYSGVFEQMLRRAIAAGRGEAVEDGDGTYMPQLSLDGFGRLERASQNAAPIKAAEFADIAPSE THPPGLYQGPSGSRALNIGAGAEPRLMTQWPASARLLGDAEARSLRLAGPMLALAAGLLALDLFIALFVAGRLRGLGRRS KAPGKTAAKTTGGALGALILAFAFMPGEPAQAQGYELRPDGSYRAIPSPSTRVVPLPEGKASQKQIDAALVMRFGYIETA DRALNERARAGLQGLSNILNMRTSVEPAEPHSLNLETDALELYPLIFFVVPENAGPLSETAIGRLNAYLRAGGALVIDTR AGGDAAAQTDVSKLETLLSGLDAPQLQPVPENHVLSRSFYLIDDFPGRFAGRRLWIEQTGEPGTARGDGVSRLFIGDADW ISAWAVDADGRDLYSVDGGPQQRETARRFGVNLVMYVLTGSYKDDQVHIPALLERLGDPDAGEPEPLMPGRIPDGGPQ
Sequences:
>Translated_958_residues MTAIGPFLLGAPLALFALLALPLIWWVLRATPPAPKEAELPSLRLLEGAEPVEETPARTPWWVWLIRTLAVIAAILGLSQ PVWAPGARTTEAGGGPLLIVMDNGWASAPRWSELTNAASATLDAGDRDGAVHLLLTAPRQLNADPAERLSRADMARRLSS LDPQPWATDRVDALARLDASKLAPARIFYASDGLETEGGAAFAAALAARAPLTVFAAPPEGPAVITGLSAQTDAVTVRLA RADTGGTARAFVSALTQDGSALGSAEAVFEAGAREAEAQFAIPAAALARIARFNVTGRPGAGTVWLWDSAERTRRVGLVD AGAEAQPLLSDMHYIRKALEPFASISTGDIETLVAAAPDAIILSDVGQIPAADTERLTEWVENGGALIRFAGPRLAAQGD ELLPVMLRRSSRAIGGALAWEEPQGLAPFPENSPFAGLPVPPDVRVRQQVLARPEPDLARKTWARLTDGSPLVSADSRGD GTLVLFHITAGPDWGDLAYSGVFEQMLRRAIAAGRGEAVEDGDGTYMPQLSLDGFGRLERASQNAAPIKAAEFADIAPSE THPPGLYQGPSGSRALNIGAGAEPRLMTQWPASARLLGDAEARSLRLAGPMLALAAGLLALDLFIALFVAGRLRGLGRRS KAPGKTAAKTTGGALGALILAFAFMPGEPAQAQGYELRPDGSYRAIPSPSTRVVPLPEGKASQKQIDAALVMRFGYIETA DRALNERARAGLQGLSNILNMRTSVEPAEPHSLNLETDALELYPLIFFVVPENAGPLSETAIGRLNAYLRAGGALVIDTR AGGDAAAQTDVSKLETLLSGLDAPQLQPVPENHVLSRSFYLIDDFPGRFAGRRLWIEQTGEPGTARGDGVSRLFIGDADW ISAWAVDADGRDLYSVDGGPQQRETARRFGVNLVMYVLTGSYKDDQVHIPALLERLGDPDAGEPEPLMPGRIPDGGPQ >Mature_957_residues TAIGPFLLGAPLALFALLALPLIWWVLRATPPAPKEAELPSLRLLEGAEPVEETPARTPWWVWLIRTLAVIAAILGLSQP VWAPGARTTEAGGGPLLIVMDNGWASAPRWSELTNAASATLDAGDRDGAVHLLLTAPRQLNADPAERLSRADMARRLSSL DPQPWATDRVDALARLDASKLAPARIFYASDGLETEGGAAFAAALAARAPLTVFAAPPEGPAVITGLSAQTDAVTVRLAR ADTGGTARAFVSALTQDGSALGSAEAVFEAGAREAEAQFAIPAAALARIARFNVTGRPGAGTVWLWDSAERTRRVGLVDA GAEAQPLLSDMHYIRKALEPFASISTGDIETLVAAAPDAIILSDVGQIPAADTERLTEWVENGGALIRFAGPRLAAQGDE LLPVMLRRSSRAIGGALAWEEPQGLAPFPENSPFAGLPVPPDVRVRQQVLARPEPDLARKTWARLTDGSPLVSADSRGDG TLVLFHITAGPDWGDLAYSGVFEQMLRRAIAAGRGEAVEDGDGTYMPQLSLDGFGRLERASQNAAPIKAAEFADIAPSET HPPGLYQGPSGSRALNIGAGAEPRLMTQWPASARLLGDAEARSLRLAGPMLALAAGLLALDLFIALFVAGRLRGLGRRSK APGKTAAKTTGGALGALILAFAFMPGEPAQAQGYELRPDGSYRAIPSPSTRVVPLPEGKASQKQIDAALVMRFGYIETAD RALNERARAGLQGLSNILNMRTSVEPAEPHSLNLETDALELYPLIFFVVPENAGPLSETAIGRLNAYLRAGGALVIDTRA GGDAAAQTDVSKLETLLSGLDAPQLQPVPENHVLSRSFYLIDDFPGRFAGRRLWIEQTGEPGTARGDGVSRLFIGDADWI SAWAVDADGRDLYSVDGGPQQRETARRFGVNLVMYVLTGSYKDDQVHIPALLERLGDPDAGEPEPLMPGRIPDGGPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 101151; Mature: 101020
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIGPFLLGAPLALFALLALPLIWWVLRATPPAPKEAELPSLRLLEGAEPVEETPARTP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHCCCCCH WWVWLIRTLAVIAAILGLSQPVWAPGARTTEAGGGPLLIVMDNGWASAPRWSELTNAASA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH TLDAGDRDGAVHLLLTAPRQLNADPAERLSRADMARRLSSLDPQPWATDRVDALARLDAS CCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHH KLAPARIFYASDGLETEGGAAFAAALAARAPLTVFAAPPEGPAVITGLSAQTDAVTVRLA HCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCEEEEEEE RADTGGTARAFVSALTQDGSALGSAEAVFEAGAREAEAQFAIPAAALARIARFNVTGRPG ECCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHCCCHHHHHHHHHCCCCCCCC AGTVWLWDSAERTRRVGLVDAGAEAQPLLSDMHYIRKALEPFASISTGDIETLVAAAPDA CCEEEEECCHHHHHEECEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCE IILSDVGQIPAADTERLTEWVENGGALIRFAGPRLAAQGDELLPVMLRRSSRAIGGALAW EEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHCCHHHCCEECC EEPQGLAPFPENSPFAGLPVPPDVRVRQQVLARPEPDLARKTWARLTDGSPLVSADSRGD CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCCCCC GTLVLFHITAGPDWGDLAYSGVFEQMLRRAIAAGRGEAVEDGDGTYMPQLSLDGFGRLER CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH ASQNAAPIKAAEFADIAPSETHPPGLYQGPSGSRALNIGAGAEPRLMTQWPASARLLGDA HCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCEEECCC EARSLRLAGPMLALAAGLLALDLFIALFVAGRLRGLGRRSKAPGKTAAKTTGGALGALIL CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHH AFAFMPGEPAQAQGYELRPDGSYRAIPSPSTRVVPLPEGKASQKQIDAALVMRFGYIETA HHHHCCCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHH DRALNERARAGLQGLSNILNMRTSVEPAEPHSLNLETDALELYPLIFFVVPENAGPLSET HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEEEEEEEECCCCCCCHHH AIGRLNAYLRAGGALVIDTRAGGDAAAQTDVSKLETLLSGLDAPQLQPVPENHVLSRSFY HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCEEE LIDDFPGRFAGRRLWIEQTGEPGTARGDGVSRLFIGDADWISAWAVDADGRDLYSVDGGP EEECCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCHHEEEEECCCCCEEEECCCCC QQRETARRFGVNLVMYVLTGSYKDDQVHIPALLERLGDPDAGEPEPLMPGRIPDGGPQ HHHHHHHHHCCEEEEEEEECCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TAIGPFLLGAPLALFALLALPLIWWVLRATPPAPKEAELPSLRLLEGAEPVEETPARTP CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHCCCCCH WWVWLIRTLAVIAAILGLSQPVWAPGARTTEAGGGPLLIVMDNGWASAPRWSELTNAASA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH TLDAGDRDGAVHLLLTAPRQLNADPAERLSRADMARRLSSLDPQPWATDRVDALARLDAS CCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHH KLAPARIFYASDGLETEGGAAFAAALAARAPLTVFAAPPEGPAVITGLSAQTDAVTVRLA HCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCEEEEEEE RADTGGTARAFVSALTQDGSALGSAEAVFEAGAREAEAQFAIPAAALARIARFNVTGRPG ECCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHCCCHHHHHHHHHCCCCCCCC AGTVWLWDSAERTRRVGLVDAGAEAQPLLSDMHYIRKALEPFASISTGDIETLVAAAPDA CCEEEEECCHHHHHEECEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCE IILSDVGQIPAADTERLTEWVENGGALIRFAGPRLAAQGDELLPVMLRRSSRAIGGALAW EEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHCCHHHCCEECC EEPQGLAPFPENSPFAGLPVPPDVRVRQQVLARPEPDLARKTWARLTDGSPLVSADSRGD CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCCCCC GTLVLFHITAGPDWGDLAYSGVFEQMLRRAIAAGRGEAVEDGDGTYMPQLSLDGFGRLER CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH ASQNAAPIKAAEFADIAPSETHPPGLYQGPSGSRALNIGAGAEPRLMTQWPASARLLGDA HCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCEEECCC EARSLRLAGPMLALAAGLLALDLFIALFVAGRLRGLGRRSKAPGKTAAKTTGGALGALIL CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHH AFAFMPGEPAQAQGYELRPDGSYRAIPSPSTRVVPLPEGKASQKQIDAALVMRFGYIETA HHHHCCCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHH DRALNERARAGLQGLSNILNMRTSVEPAEPHSLNLETDALELYPLIFFVVPENAGPLSET HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEEEEEEEECCCCCCCHHH AIGRLNAYLRAGGALVIDTRAGGDAAAQTDVSKLETLLSGLDAPQLQPVPENHVLSRSFY HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCEEE LIDDFPGRFAGRRLWIEQTGEPGTARGDGVSRLFIGDADWISAWAVDADGRDLYSVDGGP EEECCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCHHEEEEECCCCCEEEECCCCC QQRETARRFGVNLVMYVLTGSYKDDQVHIPALLERLGDPDAGEPEPLMPGRIPDGGPQ HHHHHHHHHCCEEEEEEEECCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA