Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114800527

Identifier: 114800527

GI number: 114800527

Start: 333338

End: 336214

Strand: Reverse

Name: 114800527

Synonym: HNE_0339

Alternate gene names: NA

Gene position: 336214-333338 (Counterclockwise)

Preceding gene: 114797646

Following gene: 114797790

Centisome position: 9.07

GC content: 69.69

Gene sequence:

>2877_bases
GTGACAGCCATCGGGCCTTTCCTGCTGGGGGCGCCGCTGGCGCTGTTTGCACTGCTGGCGTTGCCGCTGATCTGGTGGGT
GCTGCGGGCGACGCCGCCGGCGCCGAAGGAAGCGGAGCTACCTTCGCTGCGCCTTCTGGAGGGCGCCGAGCCGGTGGAAG
AGACGCCCGCGCGTACGCCCTGGTGGGTGTGGCTGATCCGTACACTGGCAGTTATTGCCGCGATCCTGGGGCTTTCCCAG
CCGGTCTGGGCGCCGGGCGCGCGCACGACGGAGGCGGGCGGCGGGCCGCTGCTGATCGTAATGGACAATGGCTGGGCCTC
TGCCCCGCGCTGGAGCGAGCTGACCAATGCGGCGAGCGCGACGCTGGACGCGGGCGACCGCGACGGGGCGGTGCATCTGC
TGCTGACCGCGCCGCGCCAGCTGAACGCAGACCCCGCCGAGCGATTGTCGCGCGCGGACATGGCGCGGCGGCTTTCCAGC
CTTGATCCCCAGCCCTGGGCGACGGACCGGGTGGACGCGCTGGCGCGGCTGGACGCCTCGAAGCTGGCGCCCGCGCGTAT
CTTTTATGCCAGCGACGGGCTGGAGACCGAGGGCGGCGCGGCCTTTGCCGCGGCCCTTGCTGCGCGCGCGCCGCTGACCG
TGTTTGCCGCCCCGCCCGAGGGGCCAGCGGTGATTACCGGGCTTTCAGCGCAGACCGACGCGGTGACGGTGCGGCTGGCG
CGGGCGGATACCGGCGGGACGGCGCGCGCCTTTGTTTCGGCGCTGACGCAGGATGGCTCGGCGCTGGGCTCTGCCGAGGC
GGTGTTTGAGGCCGGCGCGCGGGAAGCCGAGGCGCAGTTTGCGATCCCGGCTGCCGCGCTGGCGCGGATTGCGCGGTTCA
ATGTGACCGGACGGCCGGGCGCGGGCACGGTGTGGCTGTGGGATTCGGCGGAGCGGACGCGGCGCGTGGGCCTTGTGGAC
GCGGGCGCCGAGGCCCAGCCCCTACTTTCGGACATGCACTATATCCGCAAGGCGCTGGAGCCGTTTGCGTCGATCTCCAC
CGGGGACATCGAGACGCTGGTGGCAGCCGCCCCGGACGCGATCATTCTTTCCGATGTCGGACAGATACCGGCCGCCGACA
CCGAGCGGCTGACAGAATGGGTGGAGAATGGCGGGGCGCTGATCCGGTTTGCCGGGCCAAGGCTGGCCGCGCAGGGCGAT
GAGCTGTTGCCGGTGATGCTGCGGAGGTCTTCGCGCGCCATTGGCGGGGCGCTCGCCTGGGAGGAGCCGCAGGGGCTCGC
CCCCTTCCCTGAAAACTCGCCCTTTGCGGGCCTGCCGGTACCCCCGGATGTGCGTGTACGCCAGCAGGTGCTGGCGCGGC
CCGAGCCTGACCTTGCGCGCAAAACCTGGGCGCGGCTGACCGATGGCTCTCCGCTGGTGAGCGCCGACAGCCGGGGCGAT
GGCACGCTGGTATTGTTTCACATCACCGCCGGGCCGGACTGGGGCGACCTCGCCTATTCGGGCGTATTCGAACAGATGCT
GCGCCGGGCGATTGCGGCGGGACGCGGCGAAGCGGTGGAAGATGGCGACGGGACATACATGCCCCAGCTTTCCCTTGATG
GCTTTGGCCGGCTGGAGCGGGCGAGCCAGAACGCCGCGCCGATCAAGGCGGCAGAATTTGCAGACATCGCGCCATCGGAA
ACCCACCCGCCGGGGCTGTATCAGGGGCCATCAGGCTCCCGCGCGCTGAACATTGGCGCGGGCGCCGAGCCGCGCCTGAT
GACGCAATGGCCAGCGTCTGCGCGCCTGCTGGGCGACGCGGAGGCGCGCTCGCTGCGCCTCGCCGGGCCGATGCTGGCGC
TGGCGGCGGGGCTGCTTGCGCTGGACCTTTTCATCGCCTTGTTCGTGGCCGGACGGTTGCGCGGGCTGGGGCGACGCAGC
AAGGCGCCAGGCAAGACAGCGGCCAAAACAACGGGAGGTGCGCTGGGCGCGCTCATCCTCGCTTTTGCGTTTATGCCGGG
CGAGCCTGCCCAGGCACAGGGCTATGAACTGCGCCCCGATGGCAGCTACCGCGCGATCCCTTCGCCCTCCACCCGCGTGG
TGCCCCTGCCCGAGGGCAAGGCGAGCCAGAAGCAAATCGACGCGGCGCTGGTGATGCGCTTTGGCTATATCGAGACAGCC
GACCGGGCGCTGAACGAGCGGGCGCGGGCGGGCCTTCAGGGGCTTTCCAATATTCTGAACATGCGCACCTCGGTGGAGCC
GGCTGAGCCCCATTCGCTGAACCTTGAGACCGACGCGCTGGAACTTTACCCGCTGATCTTTTTCGTGGTGCCGGAAAATG
CCGGGCCGCTTTCGGAGACGGCGATTGGCCGGCTGAACGCCTATCTGCGGGCGGGCGGGGCGCTGGTGATTGATACACGC
GCAGGCGGCGACGCGGCGGCGCAGACCGATGTGTCGAAGCTGGAGACGCTGCTGTCGGGGCTCGACGCGCCGCAGCTTCA
GCCCGTGCCGGAAAACCATGTGCTGTCGCGCAGCTTTTACCTGATTGATGATTTCCCCGGACGCTTTGCCGGGCGGCGGC
TCTGGATCGAGCAGACCGGGGAACCGGGCACAGCGCGGGGGGACGGCGTCTCGCGCCTGTTCATTGGCGACGCTGACTGG
ATTTCGGCCTGGGCGGTGGACGCCGACGGGCGCGACCTTTACTCCGTAGACGGAGGTCCACAGCAGCGCGAAACCGCGCG
GCGGTTTGGCGTCAATCTGGTGATGTATGTGCTGACCGGGAGCTACAAGGACGACCAGGTGCATATTCCGGCGCTGCTGG
AGCGGCTGGGCGATCCCGATGCCGGTGAGCCTGAACCCCTGATGCCGGGGCGCATTCCCGATGGGGGGCCGCAATGA

Upstream 100 bases:

>100_bases
CGCGGATGGGCTGGGCGCTGGTGACGCATGTGACGGGGAGCCCGGCGCTTTCCGCCGCCGCGCGCCTGAAGGCGGAGATT
GAACGGTTCGGGGTGGCGCG

Downstream 100 bases:

>100_bases
TTGATGCGGTGCGCCTGAGCCTTGAGCCTTTCCTCGGCTGGCCGCTGATCTGGGGGTTGGCGGCGCTGACGCTGGCGGCG
TGGACGGCGTATTTCTTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 958; Mature: 957

Protein sequence:

>958_residues
MTAIGPFLLGAPLALFALLALPLIWWVLRATPPAPKEAELPSLRLLEGAEPVEETPARTPWWVWLIRTLAVIAAILGLSQ
PVWAPGARTTEAGGGPLLIVMDNGWASAPRWSELTNAASATLDAGDRDGAVHLLLTAPRQLNADPAERLSRADMARRLSS
LDPQPWATDRVDALARLDASKLAPARIFYASDGLETEGGAAFAAALAARAPLTVFAAPPEGPAVITGLSAQTDAVTVRLA
RADTGGTARAFVSALTQDGSALGSAEAVFEAGAREAEAQFAIPAAALARIARFNVTGRPGAGTVWLWDSAERTRRVGLVD
AGAEAQPLLSDMHYIRKALEPFASISTGDIETLVAAAPDAIILSDVGQIPAADTERLTEWVENGGALIRFAGPRLAAQGD
ELLPVMLRRSSRAIGGALAWEEPQGLAPFPENSPFAGLPVPPDVRVRQQVLARPEPDLARKTWARLTDGSPLVSADSRGD
GTLVLFHITAGPDWGDLAYSGVFEQMLRRAIAAGRGEAVEDGDGTYMPQLSLDGFGRLERASQNAAPIKAAEFADIAPSE
THPPGLYQGPSGSRALNIGAGAEPRLMTQWPASARLLGDAEARSLRLAGPMLALAAGLLALDLFIALFVAGRLRGLGRRS
KAPGKTAAKTTGGALGALILAFAFMPGEPAQAQGYELRPDGSYRAIPSPSTRVVPLPEGKASQKQIDAALVMRFGYIETA
DRALNERARAGLQGLSNILNMRTSVEPAEPHSLNLETDALELYPLIFFVVPENAGPLSETAIGRLNAYLRAGGALVIDTR
AGGDAAAQTDVSKLETLLSGLDAPQLQPVPENHVLSRSFYLIDDFPGRFAGRRLWIEQTGEPGTARGDGVSRLFIGDADW
ISAWAVDADGRDLYSVDGGPQQRETARRFGVNLVMYVLTGSYKDDQVHIPALLERLGDPDAGEPEPLMPGRIPDGGPQ

Sequences:

>Translated_958_residues
MTAIGPFLLGAPLALFALLALPLIWWVLRATPPAPKEAELPSLRLLEGAEPVEETPARTPWWVWLIRTLAVIAAILGLSQ
PVWAPGARTTEAGGGPLLIVMDNGWASAPRWSELTNAASATLDAGDRDGAVHLLLTAPRQLNADPAERLSRADMARRLSS
LDPQPWATDRVDALARLDASKLAPARIFYASDGLETEGGAAFAAALAARAPLTVFAAPPEGPAVITGLSAQTDAVTVRLA
RADTGGTARAFVSALTQDGSALGSAEAVFEAGAREAEAQFAIPAAALARIARFNVTGRPGAGTVWLWDSAERTRRVGLVD
AGAEAQPLLSDMHYIRKALEPFASISTGDIETLVAAAPDAIILSDVGQIPAADTERLTEWVENGGALIRFAGPRLAAQGD
ELLPVMLRRSSRAIGGALAWEEPQGLAPFPENSPFAGLPVPPDVRVRQQVLARPEPDLARKTWARLTDGSPLVSADSRGD
GTLVLFHITAGPDWGDLAYSGVFEQMLRRAIAAGRGEAVEDGDGTYMPQLSLDGFGRLERASQNAAPIKAAEFADIAPSE
THPPGLYQGPSGSRALNIGAGAEPRLMTQWPASARLLGDAEARSLRLAGPMLALAAGLLALDLFIALFVAGRLRGLGRRS
KAPGKTAAKTTGGALGALILAFAFMPGEPAQAQGYELRPDGSYRAIPSPSTRVVPLPEGKASQKQIDAALVMRFGYIETA
DRALNERARAGLQGLSNILNMRTSVEPAEPHSLNLETDALELYPLIFFVVPENAGPLSETAIGRLNAYLRAGGALVIDTR
AGGDAAAQTDVSKLETLLSGLDAPQLQPVPENHVLSRSFYLIDDFPGRFAGRRLWIEQTGEPGTARGDGVSRLFIGDADW
ISAWAVDADGRDLYSVDGGPQQRETARRFGVNLVMYVLTGSYKDDQVHIPALLERLGDPDAGEPEPLMPGRIPDGGPQ
>Mature_957_residues
TAIGPFLLGAPLALFALLALPLIWWVLRATPPAPKEAELPSLRLLEGAEPVEETPARTPWWVWLIRTLAVIAAILGLSQP
VWAPGARTTEAGGGPLLIVMDNGWASAPRWSELTNAASATLDAGDRDGAVHLLLTAPRQLNADPAERLSRADMARRLSSL
DPQPWATDRVDALARLDASKLAPARIFYASDGLETEGGAAFAAALAARAPLTVFAAPPEGPAVITGLSAQTDAVTVRLAR
ADTGGTARAFVSALTQDGSALGSAEAVFEAGAREAEAQFAIPAAALARIARFNVTGRPGAGTVWLWDSAERTRRVGLVDA
GAEAQPLLSDMHYIRKALEPFASISTGDIETLVAAAPDAIILSDVGQIPAADTERLTEWVENGGALIRFAGPRLAAQGDE
LLPVMLRRSSRAIGGALAWEEPQGLAPFPENSPFAGLPVPPDVRVRQQVLARPEPDLARKTWARLTDGSPLVSADSRGDG
TLVLFHITAGPDWGDLAYSGVFEQMLRRAIAAGRGEAVEDGDGTYMPQLSLDGFGRLERASQNAAPIKAAEFADIAPSET
HPPGLYQGPSGSRALNIGAGAEPRLMTQWPASARLLGDAEARSLRLAGPMLALAAGLLALDLFIALFVAGRLRGLGRRSK
APGKTAAKTTGGALGALILAFAFMPGEPAQAQGYELRPDGSYRAIPSPSTRVVPLPEGKASQKQIDAALVMRFGYIETAD
RALNERARAGLQGLSNILNMRTSVEPAEPHSLNLETDALELYPLIFFVVPENAGPLSETAIGRLNAYLRAGGALVIDTRA
GGDAAAQTDVSKLETLLSGLDAPQLQPVPENHVLSRSFYLIDDFPGRFAGRRLWIEQTGEPGTARGDGVSRLFIGDADWI
SAWAVDADGRDLYSVDGGPQQRETARRFGVNLVMYVLTGSYKDDQVHIPALLERLGDPDAGEPEPLMPGRIPDGGPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 101151; Mature: 101020

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAIGPFLLGAPLALFALLALPLIWWVLRATPPAPKEAELPSLRLLEGAEPVEETPARTP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHCCCCCH
WWVWLIRTLAVIAAILGLSQPVWAPGARTTEAGGGPLLIVMDNGWASAPRWSELTNAASA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
TLDAGDRDGAVHLLLTAPRQLNADPAERLSRADMARRLSSLDPQPWATDRVDALARLDAS
CCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHH
KLAPARIFYASDGLETEGGAAFAAALAARAPLTVFAAPPEGPAVITGLSAQTDAVTVRLA
HCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCEEEEEEE
RADTGGTARAFVSALTQDGSALGSAEAVFEAGAREAEAQFAIPAAALARIARFNVTGRPG
ECCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHCCCHHHHHHHHHCCCCCCCC
AGTVWLWDSAERTRRVGLVDAGAEAQPLLSDMHYIRKALEPFASISTGDIETLVAAAPDA
CCEEEEECCHHHHHEECEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCE
IILSDVGQIPAADTERLTEWVENGGALIRFAGPRLAAQGDELLPVMLRRSSRAIGGALAW
EEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHCCHHHCCEECC
EEPQGLAPFPENSPFAGLPVPPDVRVRQQVLARPEPDLARKTWARLTDGSPLVSADSRGD
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCCCCC
GTLVLFHITAGPDWGDLAYSGVFEQMLRRAIAAGRGEAVEDGDGTYMPQLSLDGFGRLER
CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
ASQNAAPIKAAEFADIAPSETHPPGLYQGPSGSRALNIGAGAEPRLMTQWPASARLLGDA
HCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCEEECCC
EARSLRLAGPMLALAAGLLALDLFIALFVAGRLRGLGRRSKAPGKTAAKTTGGALGALIL
CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHH
AFAFMPGEPAQAQGYELRPDGSYRAIPSPSTRVVPLPEGKASQKQIDAALVMRFGYIETA
HHHHCCCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHH
DRALNERARAGLQGLSNILNMRTSVEPAEPHSLNLETDALELYPLIFFVVPENAGPLSET
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEEEEEEEECCCCCCCHHH
AIGRLNAYLRAGGALVIDTRAGGDAAAQTDVSKLETLLSGLDAPQLQPVPENHVLSRSFY
HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCEEE
LIDDFPGRFAGRRLWIEQTGEPGTARGDGVSRLFIGDADWISAWAVDADGRDLYSVDGGP
EEECCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCHHEEEEECCCCCEEEECCCCC
QQRETARRFGVNLVMYVLTGSYKDDQVHIPALLERLGDPDAGEPEPLMPGRIPDGGPQ
HHHHHHHHHCCEEEEEEEECCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TAIGPFLLGAPLALFALLALPLIWWVLRATPPAPKEAELPSLRLLEGAEPVEETPARTP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHCCCCCH
WWVWLIRTLAVIAAILGLSQPVWAPGARTTEAGGGPLLIVMDNGWASAPRWSELTNAASA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
TLDAGDRDGAVHLLLTAPRQLNADPAERLSRADMARRLSSLDPQPWATDRVDALARLDAS
CCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHH
KLAPARIFYASDGLETEGGAAFAAALAARAPLTVFAAPPEGPAVITGLSAQTDAVTVRLA
HCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCEEEEEEE
RADTGGTARAFVSALTQDGSALGSAEAVFEAGAREAEAQFAIPAAALARIARFNVTGRPG
ECCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHCCCHHHHHHHHHCCCCCCCC
AGTVWLWDSAERTRRVGLVDAGAEAQPLLSDMHYIRKALEPFASISTGDIETLVAAAPDA
CCEEEEECCHHHHHEECEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCE
IILSDVGQIPAADTERLTEWVENGGALIRFAGPRLAAQGDELLPVMLRRSSRAIGGALAW
EEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHCCHHHCCEECC
EEPQGLAPFPENSPFAGLPVPPDVRVRQQVLARPEPDLARKTWARLTDGSPLVSADSRGD
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCCCCC
GTLVLFHITAGPDWGDLAYSGVFEQMLRRAIAAGRGEAVEDGDGTYMPQLSLDGFGRLER
CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
ASQNAAPIKAAEFADIAPSETHPPGLYQGPSGSRALNIGAGAEPRLMTQWPASARLLGDA
HCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCEEECCC
EARSLRLAGPMLALAAGLLALDLFIALFVAGRLRGLGRRSKAPGKTAAKTTGGALGALIL
CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHH
AFAFMPGEPAQAQGYELRPDGSYRAIPSPSTRVVPLPEGKASQKQIDAALVMRFGYIETA
HHHHCCCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHH
DRALNERARAGLQGLSNILNMRTSVEPAEPHSLNLETDALELYPLIFFVVPENAGPLSET
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEEEEEEEECCCCCCCHHH
AIGRLNAYLRAGGALVIDTRAGGDAAAQTDVSKLETLLSGLDAPQLQPVPENHVLSRSFY
HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCEEE
LIDDFPGRFAGRRLWIEQTGEPGTARGDGVSRLFIGDADWISAWAVDADGRDLYSVDGGP
EEECCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCHHEEEEECCCCCEEEECCCCC
QQRETARRFGVNLVMYVLTGSYKDDQVHIPALLERLGDPDAGEPEPLMPGRIPDGGPQ
HHHHHHHHHCCEEEEEEEECCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA