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The map label for this gene is 114800524

Identifier: 114800524

GI number: 114800524

Start: 2342950

End: 2344371

Strand: Reverse

Name: 114800524

Synonym: HNE_2241

Alternate gene names: NA

Gene position: 2344371-2342950 (Counterclockwise)

Preceding gene: 114800349

Following gene: 114797199

Centisome position: 63.28

GC content: 66.6

Gene sequence:

>1422_bases
ATGTCCCCAGCCGATGCCGGCCAGCCTGTAGCCAGGGCGGCGCCTGTGCGCCTGCGTCCGCGCTTGGGTGTGGCAGATGT
GCTGGTGCATCTGTGGCGGGCGAAATGGCTGATGCTGCTGGTGTTTCTGCCGCTGTTTGCGCTGGGACTGTTTGCGGCGT
TGATGCTGCCCGTAAAATATACCGCAACCGCCCGGCTGTTGGTTTCGCCAGCGGCGGAGCGGGCCGGAGGCAGCGCAGAA
AACCTTGCGCAGTCCGAGATCGAACTGGTGCGCAGCCCCGTGGTGGCGCGCGCCGCGCTGGGCAAGGTGACCCTCGCGCG
GGCCTATCCGGCGCTTGCCGCGCAGTGCAGCGTGAAGGATTGCGAACGTATTGGCGCCGAGCTGGTCGGCGCGAGCCTCG
AAACCTGGATCGCGCCGGGTGGCGGCGCAGTGAGCCTGAGACTGAGCCATTCAGAGCCCGCCATTGCGGCGGAACTGCTC
AACGCCCTGACACGCGCCTATCTCGATTACCGCCCGGCTGTGCTGGGTGAGGAGCCTGCCTTGAGTTTTGGCGCCCAGCG
GGAACGCTTTGAACGGGAAGTGGGCGACGCAGAAGCAGCGATCCAGACCTATCTCTCTCAAAATGGCCTAAGCGGACTGG
AAACCGGCGCCGGCGCCAATCAGCGCCTCTACGAAGCCGCCAATCTGGAGCTGATGGCCGCGACGGCGCGTAAGGCGCAG
CGGGAGGCGGAACTTGCCAGCTATCGTCAGAAACTGACCACGCTGAGCCCTGATCAGACGCTGTATGAGGAAGACACGTC
GCGTCAGCGCCTGCAGGAACTCTATGTTCAGCGGGCAGAGCTGCGCGCACGCCTCGCGCCCAATTCGCTTGCGCTGCGCG
ATCTCGATAATCGCATCGCGCGGATTGAAGGCCTGCTCGCCTCGCAGGATCAAACTGCCGCAACGGTGCGCCGTGGACCT
GACCCTCTGTATCAGGAGGTACAGGCGGCCATAGCGCGGCTGGAGGCCGAGGTGCAGGCGGCGAGCCGTCAGCAGGCGGA
TTTGCATGCGCAGATTGCCAGTATTGAAGCGCGGGACCAGAGATTGCGGGAACTCGCGCCCGGCCTTGCAGAGTTGCAGC
GGCGGCGTGACGTGGCGGCAGAGGCTGCGCGCGGCTTTGGCGCCCGCGCAGCGCAGGCCCGCGCCCGCAGTGAACTGGCG
CGCGAAGGGGCTGGCGATGTGCGGCTTCTGGAGGACGCGCAGGTTCCGCGCCGCGGTGAAAGCTGGCGCGTGCCTGCGGC
GCTGGTGGCCTTTCTGCTGGCCGCCTTTGCGGCCTTTGTTGCAGGGCTCGCCCATGCGCTCAGCCGGCACGGATTTGCGA
CGCCGGGCGCGCTGGAACGCACGACGGGATTGCCCGTTCTGGCGGTTATTCGCGAGCATTGA

Upstream 100 bases:

>100_bases
AAGGCGGCACGCGGGGCCAGTCCCCTGATGCTTAAGGAAATATAAAACGCGCCGTGCCATTCATGACAGGTTGAGTACCC
GCAAGGAGCGGCGCGAGCCT

Downstream 100 bases:

>100_bases
CGGCCAGGGCAGCGGCCTTTTCTAAAGACGCGTTAACCCTCCCATGCTAGCGCTTCAGGCAGGAAGCACAAAGGCCAAGC
ATGTTCGATCTGCGCCAGGA

Product: putative chain length determinant protein

Products: NA

Alternate protein names: Chain Length Determinant Protein

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MSPADAGQPVARAAPVRLRPRLGVADVLVHLWRAKWLMLLVFLPLFALGLFAALMLPVKYTATARLLVSPAAERAGGSAE
NLAQSEIELVRSPVVARAALGKVTLARAYPALAAQCSVKDCERIGAELVGASLETWIAPGGGAVSLRLSHSEPAIAAELL
NALTRAYLDYRPAVLGEEPALSFGAQRERFEREVGDAEAAIQTYLSQNGLSGLETGAGANQRLYEAANLELMAATARKAQ
REAELASYRQKLTTLSPDQTLYEEDTSRQRLQELYVQRAELRARLAPNSLALRDLDNRIARIEGLLASQDQTAATVRRGP
DPLYQEVQAAIARLEAEVQAASRQQADLHAQIASIEARDQRLRELAPGLAELQRRRDVAAEAARGFGARAAQARARSELA
REGAGDVRLLEDAQVPRRGESWRVPAALVAFLLAAFAAFVAGLAHALSRHGFATPGALERTTGLPVLAVIREH

Sequences:

>Translated_473_residues
MSPADAGQPVARAAPVRLRPRLGVADVLVHLWRAKWLMLLVFLPLFALGLFAALMLPVKYTATARLLVSPAAERAGGSAE
NLAQSEIELVRSPVVARAALGKVTLARAYPALAAQCSVKDCERIGAELVGASLETWIAPGGGAVSLRLSHSEPAIAAELL
NALTRAYLDYRPAVLGEEPALSFGAQRERFEREVGDAEAAIQTYLSQNGLSGLETGAGANQRLYEAANLELMAATARKAQ
REAELASYRQKLTTLSPDQTLYEEDTSRQRLQELYVQRAELRARLAPNSLALRDLDNRIARIEGLLASQDQTAATVRRGP
DPLYQEVQAAIARLEAEVQAASRQQADLHAQIASIEARDQRLRELAPGLAELQRRRDVAAEAARGFGARAAQARARSELA
REGAGDVRLLEDAQVPRRGESWRVPAALVAFLLAAFAAFVAGLAHALSRHGFATPGALERTTGLPVLAVIREH
>Mature_472_residues
SPADAGQPVARAAPVRLRPRLGVADVLVHLWRAKWLMLLVFLPLFALGLFAALMLPVKYTATARLLVSPAAERAGGSAEN
LAQSEIELVRSPVVARAALGKVTLARAYPALAAQCSVKDCERIGAELVGASLETWIAPGGGAVSLRLSHSEPAIAAELLN
ALTRAYLDYRPAVLGEEPALSFGAQRERFEREVGDAEAAIQTYLSQNGLSGLETGAGANQRLYEAANLELMAATARKAQR
EAELASYRQKLTTLSPDQTLYEEDTSRQRLQELYVQRAELRARLAPNSLALRDLDNRIARIEGLLASQDQTAATVRRGPD
PLYQEVQAAIARLEAEVQAASRQQADLHAQIASIEARDQRLRELAPGLAELQRRRDVAAEAARGFGARAAQARARSELAR
EGAGDVRLLEDAQVPRRGESWRVPAALVAFLLAAFAAFVAGLAHALSRHGFATPGALERTTGLPVLAVIREH

Specific function: Unknown

COG id: COG3206

COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50929; Mature: 50798

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS00422 GRANINS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPADAGQPVARAAPVRLRPRLGVADVLVHLWRAKWLMLLVFLPLFALGLFAALMLPVKY
CCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TATARLLVSPAAERAGGSAENLAQSEIELVRSPVVARAALGKVTLARAYPALAAQCSVKD
HHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
CERIGAELVGASLETWIAPGGGAVSLRLSHSEPAIAAELLNALTRAYLDYRPAVLGEEPA
HHHHHHHHHCCCHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
LSFGAQRERFEREVGDAEAAIQTYLSQNGLSGLETGAGANQRLYEAANLELMAATARKAQ
HHCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHH
REAELASYRQKLTTLSPDQTLYEEDTSRQRLQELYVQRAELRARLAPNSLALRDLDNRIA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RIEGLLASQDQTAATVRRGPDPLYQEVQAAIARLEAEVQAASRQQADLHAQIASIEARDQ
HHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLRELAPGLAELQRRRDVAAEAARGFGARAAQARARSELAREGAGDVRLLEDAQVPRRGE
HHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC
SWRVPAALVAFLLAAFAAFVAGLAHALSRHGFATPGALERTTGLPVLAVIREH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHCC
>Mature Secondary Structure 
SPADAGQPVARAAPVRLRPRLGVADVLVHLWRAKWLMLLVFLPLFALGLFAALMLPVKY
CCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TATARLLVSPAAERAGGSAENLAQSEIELVRSPVVARAALGKVTLARAYPALAAQCSVKD
HHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
CERIGAELVGASLETWIAPGGGAVSLRLSHSEPAIAAELLNALTRAYLDYRPAVLGEEPA
HHHHHHHHHCCCHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
LSFGAQRERFEREVGDAEAAIQTYLSQNGLSGLETGAGANQRLYEAANLELMAATARKAQ
HHCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHH
REAELASYRQKLTTLSPDQTLYEEDTSRQRLQELYVQRAELRARLAPNSLALRDLDNRIA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RIEGLLASQDQTAATVRRGPDPLYQEVQAAIARLEAEVQAASRQQADLHAQIASIEARDQ
HHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLRELAPGLAELQRRRDVAAEAARGFGARAAQARARSELAREGAGDVRLLEDAQVPRRGE
HHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC
SWRVPAALVAFLLAAFAAFVAGLAHALSRHGFATPGALERTTGLPVLAVIREH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA