| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is dctR [H]
Identifier: 114800503
GI number: 114800503
Start: 1256412
End: 1256822
Strand: Direct
Name: dctR [H]
Synonym: HNE_1236
Alternate gene names: 114800503
Gene position: 1256412-1256822 (Clockwise)
Preceding gene: 114798134
Following gene: 114800327
Centisome position: 33.91
GC content: 63.5
Gene sequence:
>411_bases ATGCCGGAGTGTCCCTTGAGCGCCATCGCAAAACCTTTGCCAGTTCATCCGCCGCGCCGCATTGCTGTCGTCGATGACAG CCCGGCCGTCCGCCAGTCGCTGCGCGTCCTGCTCGGCGCGCGGGGTTTTGTCGTAAGCACTTTTATCGGCGCCGACGACC TGCTGGGCCAGCTCAGTCCCGGTGATTTCGACTGCTATGTCCTTGATCTGAAACTCGAAGGGATGGATGGCTTCGCCCTG CTCGAAGCGCTGCGCCAGCGCGGAATATCTGCCCCCGCCATCATGATTTCCGGCTGGGAGCTCCCCTCTCTGGAAGTCAC CGCCCAGCGTGCCGGCTTCGCCGCGCTCGTGCGCAAGCCGATGATGGATACGTCGCTGGTCCGTGTACTGCGAGATGTCC TGCCGGACTGA
Upstream 100 bases:
>100_bases TGCCTTCGCCGCAGGCATTGGCCTTGAATAATCAGCAGCTTTAGGGGCTTCTACTTACAGACGGCCCAGGAGATTCCTGC GCAAGGTGCAGCCTCCCGGA
Downstream 100 bases:
>100_bases GTTGGCCCTAGTCGTCCTGAAAACGATAGAGCGAAATTCCGCGCGCGCGTTCGTCGAACACCAGTTTCCGGCTGAGCGGC GCGTGCGCGCGGGAGGCGCA
Product: response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MPECPLSAIAKPLPVHPPRRIAVVDDSPAVRQSLRVLLGARGFVVSTFIGADDLLGQLSPGDFDCYVLDLKLEGMDGFAL LEALRQRGISAPAIMISGWELPSLEVTAQRAGFAALVRKPMMDTSLVRVLRDVLPD
Sequences:
>Translated_136_residues MPECPLSAIAKPLPVHPPRRIAVVDDSPAVRQSLRVLLGARGFVVSTFIGADDLLGQLSPGDFDCYVLDLKLEGMDGFAL LEALRQRGISAPAIMISGWELPSLEVTAQRAGFAALVRKPMMDTSLVRVLRDVLPD >Mature_135_residues PECPLSAIAKPLPVHPPRRIAVVDDSPAVRQSLRVLLGARGFVVSTFIGADDLLGQLSPGDFDCYVLDLKLEGMDGFALL EALRQRGISAPAIMISGWELPSLEVTAQRAGFAALVRKPMMDTSLVRVLRDVLPD
Specific function: Member of the two-component regulatory system dctS/dctR involved in the transport of C4-dicarboxylates. DctR functions as a transcriptional repressor of genes for C4-dicarboxylate transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 - InterPro: IPR000792 - InterPro: IPR011991 [H]
Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]
EC number: 2.7.3.- [C]
Molecular weight: Translated: 14678; Mature: 14547
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPECPLSAIAKPLPVHPPRRIAVVDDSPAVRQSLRVLLGARGFVVSTFIGADDLLGQLSP CCCCCHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHCHHHHHHCCCC GDFDCYVLDLKLEGMDGFALLEALRQRGISAPAIMISGWELPSLEVTAQRAGFAALVRKP CCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHCC MMDTSLVRVLRDVLPD CCCHHHHHHHHHHCCC >Mature Secondary Structure PECPLSAIAKPLPVHPPRRIAVVDDSPAVRQSLRVLLGARGFVVSTFIGADDLLGQLSP CCCCHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHCHHHHHHCCCC GDFDCYVLDLKLEGMDGFALLEALRQRGISAPAIMISGWELPSLEVTAQRAGFAALVRKP CCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHCC MMDTSLVRVLRDVLPD CCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Phosphotransferases with a nitrogenous group as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8455557 [H]