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The map label for this gene is yceJ [H]

Identifier: 114800490

GI number: 114800490

Start: 921754

End: 922308

Strand: Direct

Name: yceJ [H]

Synonym: HNE_0904

Alternate gene names: 114800490

Gene position: 921754-922308 (Clockwise)

Preceding gene: 114799562

Following gene: 114797498

Centisome position: 24.88

GC content: 65.59

Gene sequence:

>555_bases
ATGACGGACCAGACCCGCGCCAGCTATGGCGCTCTCTCACGCCTCAATCACTGGCTCACATTCCTGCTCTTTTCCGGCAT
GCTGATCGTCGGTTTCACCCTCGCCTATGGCGGGCTGGAGCGGGAAACGCGCGGCCCGCTGATGAACCTGCACAAGGCCA
CCGGCACGCTGCTGCTCCTCTTCGCGGCCTGGCGCATCAGCTGGCGCCTCACGCAAGGCTTTCCGCCGCCGATGCCCGGC
GTGCCCGCCTGGCAGATCACGGCGTCTCGCATCGTCCATTGGGGGCTGCTCGCCGCGATCCTTATCATGCCGCTGTCGGG
CGTAGTCATGTCGCTGCTCGGCGGGCGCCCCATCGGCATCTACGGCCTCTTCCTCATTCCGCCGGTTGCCGAGATCGAAG
CCGTCGGCAAAGCCGCCCGCCAGGTCCACGGCTACGCTGCGTTCACCTTCGTCGGCCTCATCACGCTTCACATCCTCGCC
GCCCTGAAACACGCTCTCATCGACAAGGACGGAACCCTCTCCCGCATGCTCAGCGGAAAAGGCGCGGCAGTTTAG

Upstream 100 bases:

>100_bases
GGACGGGCACGGAGGAAGCCCAATGGGCCATTCTCCTCAAAGAGATTGCAGCCATCTCCTGATGGGCTAGTCTGACCCCT
CAATCAGGGGAAATCAGACG

Downstream 100 bases:

>100_bases
GCAGACCAATTGCCAATACCCGCCCGCCGGGTTTAAGCTCTCCTCAGCAGCCCGCCACAGGAGAGCGGGCAGGGAGGAAG
CCATGCAGATCACACCCCTC

Product: nickel-dependent hydrogenase, b-type cytochrome subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MTDQTRASYGALSRLNHWLTFLLFSGMLIVGFTLAYGGLERETRGPLMNLHKATGTLLLLFAAWRISWRLTQGFPPPMPG
VPAWQITASRIVHWGLLAAILIMPLSGVVMSLLGGRPIGIYGLFLIPPVAEIEAVGKAARQVHGYAAFTFVGLITLHILA
ALKHALIDKDGTLSRMLSGKGAAV

Sequences:

>Translated_184_residues
MTDQTRASYGALSRLNHWLTFLLFSGMLIVGFTLAYGGLERETRGPLMNLHKATGTLLLLFAAWRISWRLTQGFPPPMPG
VPAWQITASRIVHWGLLAAILIMPLSGVVMSLLGGRPIGIYGLFLIPPVAEIEAVGKAARQVHGYAAFTFVGLITLHILA
ALKHALIDKDGTLSRMLSGKGAAV
>Mature_183_residues
TDQTRASYGALSRLNHWLTFLLFSGMLIVGFTLAYGGLERETRGPLMNLHKATGTLLLLFAAWRISWRLTQGFPPPMPGV
PAWQITASRIVHWGLLAAILIMPLSGVVMSLLGGRPIGIYGLFLIPPVAEIEAVGKAARQVHGYAAFTFVGLITLHILAA
LKHALIDKDGTLSRMLSGKGAAV

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b561 family [H]

Homologues:

Organism=Escherichia coli, GI1787296, Length=185, Percent_Identity=32.4324324324324, Blast_Score=84, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 19842; Mature: 19711

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQTRASYGALSRLNHWLTFLLFSGMLIVGFTLAYGGLERETRGPLMNLHKATGTLLLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHH
FAAWRISWRLTQGFPPPMPGVPAWQITASRIVHWGLLAAILIMPLSGVVMSLLGGRPIGI
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
YGLFLIPPVAEIEAVGKAARQVHGYAAFTFVGLITLHILAALKHALIDKDGTLSRMLSGK
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC
GAAV
CCCC
>Mature Secondary Structure 
TDQTRASYGALSRLNHWLTFLLFSGMLIVGFTLAYGGLERETRGPLMNLHKATGTLLLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHH
FAAWRISWRLTQGFPPPMPGVPAWQITASRIVHWGLLAAILIMPLSGVVMSLLGGRPIGI
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
YGLFLIPPVAEIEAVGKAARQVHGYAAFTFVGLITLHILAALKHALIDKDGTLSRMLSGK
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC
GAAV
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]