Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114800429

Identifier: 114800429

GI number: 114800429

Start: 2450042

End: 2451220

Strand: Reverse

Name: 114800429

Synonym: HNE_2350

Alternate gene names: NA

Gene position: 2451220-2450042 (Counterclockwise)

Preceding gene: 114800117

Following gene: 114800003

Centisome position: 66.16

GC content: 57.93

Gene sequence:

>1179_bases
ATGCTGGCTGTTAACCATATTGATCCAATCGCACCTGAAACAACAACCAGGACTTGCGCAACGCGCGTATTTCCGCTTCT
TTCTGGTGTGGGGGGAATGCGTAATACAAATTCAGCCGTGGGATCGAACGAGGAGTTTGATGCAATGCATCGCAGCCCGG
CACTCAATGGCGGTTCGCCAACGATCCCGATTGACGAACTTTCAGCCAGCCTTTCCGACCCTGTTCTAGCCGCGCTGCTT
CAAAGCAGCCGTGATTGCATCAAGGTGCTCGATCTCACTGGACGTATCCGGTACATGAACCCGATGGGCCTTTCCGCGCG
GCAGCTGAGCGCGGATACGGATGTCATCGGCCGGCACTGGTGGGATCTCTGGCCTGAAGAATCCCATTCCATGGTGCAGG
ACGCGACCGGCAAAGGCGCAAGCGGGGACTCCACAGATTTTCGGGGTTTTTGCCCCACCGCGCGCGGGCGGCCCAAATGG
TGGGATGTGCGTATGGTTCCAATCCGGAACGGCGCTGGCGAAGTGACCGGAGTGCTCGTTGTCTCAAAGGATGTGACGGA
CGCCGTTACCAATCGCAAGATGTACGACACCATCGCTCTGGAGATGCGCCACAGGCTGAAGAACGCTTTTGCGGTGGCCA
GCGCGATTGCCAAGATCAGCGCGCGGCAGACGCCCGAGCATCAGCCCTTTGCAGAAGATCTCGTCAAACGCTTCTCTTCC
CTCGCCGTGGCGCAGGGCAAGCTGGTGGACGCGGCTAGCGATTTTCCTCTGCGGGCGCTGGTTTCCGACCTCGTTGATGC
AGCAGGTGTCAGTGAAGAAACAATCGATGTGTCGGGGCTGCCCGATTGCCTTGTGGATGAAGCGCAGATGCGGGTCATTG
CGGTGGTGATTGGTGAATTGACCACGAACTCTCTGAAGTATGGGGCGCTGCGCAATGGCGGGGCCATTTACTGCCAGGGG
CGCATTGAGGACGAATGGTTGCATCTGTCCTGGATCGAGCCTCTCGAGGATGCATCGGAAGGTCAGACCGAAACATCGTC
ATCCACCAATACCGGGCTTGCGGTTATTCAGCGGATCGTGACATCGGCCGGTGGGCAGGTGTCGCGTGTCATGAACCAGG
ATGGATTGAGAGTCGATTTCTCGCTGGTGCATCAGCAAGCCGACGCATCTTCAGACTGA

Upstream 100 bases:

>100_bases
CAGGGGCCGCATCATAAAAATCCGCATAGAGAGCATTTTTGGTGTTTTCCGGGGGAGTTCTCCTCCTGAAAACAATGTGT
CAGCCAGCGCGCCCCATGGT

Downstream 100 bases:

>100_bases
ATTTTCTGCTGCCAGAATGGAAACCGCCACCCAGCAGGGCTGGGTGGCGGACAGGCGCCTTACGTTGGGGTGGGGGGACG
CTGACGTGGCGCCTGCTGTT

Product: putative sensory box sensor histidine kinase

Products: NA

Alternate protein names: EL360-LOV-histidine kinase; EL360-LOV-HK [H]

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MLAVNHIDPIAPETTTRTCATRVFPLLSGVGGMRNTNSAVGSNEEFDAMHRSPALNGGSPTIPIDELSASLSDPVLAALL
QSSRDCIKVLDLTGRIRYMNPMGLSARQLSADTDVIGRHWWDLWPEESHSMVQDATGKGASGDSTDFRGFCPTARGRPKW
WDVRMVPIRNGAGEVTGVLVVSKDVTDAVTNRKMYDTIALEMRHRLKNAFAVASAIAKISARQTPEHQPFAEDLVKRFSS
LAVAQGKLVDAASDFPLRALVSDLVDAAGVSEETIDVSGLPDCLVDEAQMRVIAVVIGELTTNSLKYGALRNGGAIYCQG
RIEDEWLHLSWIEPLEDASEGQTETSSSTNTGLAVIQRIVTSAGGQVSRVMNQDGLRVDFSLVHQQADASSD

Sequences:

>Translated_392_residues
MLAVNHIDPIAPETTTRTCATRVFPLLSGVGGMRNTNSAVGSNEEFDAMHRSPALNGGSPTIPIDELSASLSDPVLAALL
QSSRDCIKVLDLTGRIRYMNPMGLSARQLSADTDVIGRHWWDLWPEESHSMVQDATGKGASGDSTDFRGFCPTARGRPKW
WDVRMVPIRNGAGEVTGVLVVSKDVTDAVTNRKMYDTIALEMRHRLKNAFAVASAIAKISARQTPEHQPFAEDLVKRFSS
LAVAQGKLVDAASDFPLRALVSDLVDAAGVSEETIDVSGLPDCLVDEAQMRVIAVVIGELTTNSLKYGALRNGGAIYCQG
RIEDEWLHLSWIEPLEDASEGQTETSSSTNTGLAVIQRIVTSAGGQVSRVMNQDGLRVDFSLVHQQADASSD
>Mature_392_residues
MLAVNHIDPIAPETTTRTCATRVFPLLSGVGGMRNTNSAVGSNEEFDAMHRSPALNGGSPTIPIDELSASLSDPVLAALL
QSSRDCIKVLDLTGRIRYMNPMGLSARQLSADTDVIGRHWWDLWPEESHSMVQDATGKGASGDSTDFRGFCPTARGRPKW
WDVRMVPIRNGAGEVTGVLVVSKDVTDAVTNRKMYDTIALEMRHRLKNAFAVASAIAKISARQTPEHQPFAEDLVKRFSS
LAVAQGKLVDAASDFPLRALVSDLVDAAGVSEETIDVSGLPDCLVDEAQMRVIAVVIGELTTNSLKYGALRNGGAIYCQG
RIEDEWLHLSWIEPLEDASEGQTETSSSTNTGLAVIQRIVTSAGGQVSRVMNQDGLRVDFSLVHQQADASSD

Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR011102 [H]

Pfam domain/function: PF07536 HWE_HK; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 42246; Mature: 42246

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAVNHIDPIAPETTTRTCATRVFPLLSGVGGMRNTNSAVGSNEEFDAMHRSPALNGGSP
CEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCC
TIPIDELSASLSDPVLAALLQSSRDCIKVLDLTGRIRYMNPMGLSARQLSADTDVIGRHW
CCCHHHHHHHHCHHHHHHHHHCCHHHHHHHHCCCCEEEECCCCCCHHHHCCCHHHHHHHH
WDLWPEESHSMVQDATGKGASGDSTDFRGFCPTARGRPKWWDVRMVPIRNGAGEVTGVLV
HHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEE
VSKDVTDAVTNRKMYDTIALEMRHRLKNAFAVASAIAKISARQTPEHQPFAEDLVKRFSS
EECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LAVAQGKLVDAASDFPLRALVSDLVDAAGVSEETIDVSGLPDCLVDEAQMRVIAVVIGEL
HHHHCCCEECCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHH
TTNSLKYGALRNGGAIYCQGRIEDEWLHLSWIEPLEDASEGQTETSSSTNTGLAVIQRIV
HCCCEEECEECCCCEEEEECCCCCCEEEEEECCCHHCCCCCCCCCCCCCCHHHHHHHHHH
TSAGGQVSRVMNQDGLRVDFSLVHQQADASSD
HHCCCHHHHHHCCCCCEEHHHHHHHHCCCCCC
>Mature Secondary Structure
MLAVNHIDPIAPETTTRTCATRVFPLLSGVGGMRNTNSAVGSNEEFDAMHRSPALNGGSP
CEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCC
TIPIDELSASLSDPVLAALLQSSRDCIKVLDLTGRIRYMNPMGLSARQLSADTDVIGRHW
CCCHHHHHHHHCHHHHHHHHHCCHHHHHHHHCCCCEEEECCCCCCHHHHCCCHHHHHHHH
WDLWPEESHSMVQDATGKGASGDSTDFRGFCPTARGRPKWWDVRMVPIRNGAGEVTGVLV
HHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEE
VSKDVTDAVTNRKMYDTIALEMRHRLKNAFAVASAIAKISARQTPEHQPFAEDLVKRFSS
EECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LAVAQGKLVDAASDFPLRALVSDLVDAAGVSEETIDVSGLPDCLVDEAQMRVIAVVIGEL
HHHHCCCEECCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHH
TTNSLKYGALRNGGAIYCQGRIEDEWLHLSWIEPLEDASEGQTETSSSTNTGLAVIQRIV
HCCCEEECEECCCCEEEEECCCCCCEEEEEECCCHHCCCCCCCCCCCCCCHHHHHHHHHH
TSAGGQVSRVMNQDGLRVDFSLVHQQADASSD
HHCCCHHHHHHCCCCCEEHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA