| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is mucR [H]
Identifier: 114800329
GI number: 114800329
Start: 2134770
End: 2135348
Strand: Direct
Name: mucR [H]
Synonym: HNE_2061
Alternate gene names: 114800329
Gene position: 2134770-2135348 (Clockwise)
Preceding gene: 114797350
Following gene: 114797751
Centisome position: 57.62
GC content: 54.58
Gene sequence:
>579_bases GTGCAGGCAGGCTCGGCAACTGCGACTCGAAGTTCTACAGAAATTCAACTAGAGTGGAAGAATAATCGCCGCCGCGATGA AAAAGATAGGCCGATACTTTACGAGCCGTATCGATTATACTTAGACAAGCGAAGAATTGCGAGAATCGTTGCAGCAATTA CAGGATGCATGGGGTGGACGATGACTGATCCGGAAGACTTGGACGCTTTGGACATGACCGTCGAGATCGTCTCGTCCTAT GTGGCGAACAATGCGATACAGTCGGATCAGCTGCCCGCTCTGATCAAGAGTGTCCACGCAACCTTGAGCGATCTGACGAA TACTGTGCCAGTTCCGGCCGAGAAGCTGGAGCCGGCGGTTGCGATCAACAAGTCTGTTACGCCGGAGTTTCTGATCTGTC TGGAAGATGGCGCGAAGCTGAAGATGCTGAAGCGGTATCTGCGCACGCGGTTTGACATGACGCCGGAGGATTACCGCGCC AAATGGGGCCTGCCGGCGGACTATCCGATGGTGGCGCCCAATTATGCCAAGCTTCGGTCGAAGCACGCCAAGCAGATCGG GCTGGGCAAGAAGCGTTGA
Upstream 100 bases:
>100_bases GCAAGACCAACGGAGAAAAAGCCCCCGGCCAGCGTTTCTGGAACATGCGCCGAATCTGCCATGGGAGCCTCCTTTGCGAC GGTCTGGGGCTGTTTACGCG
Downstream 100 bases:
>100_bases TTTCAAACGCAAAATGGCCCGGCAGAACCGGGCCACTCTAAGCACTTTCCAGGACAAACCGGGACACTTTGGGACAAAAC GCGCCCTTAAGCGGCCTTGT
Product: transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MQAGSATATRSSTEIQLEWKNNRRRDEKDRPILYEPYRLYLDKRRIARIVAAITGCMGWTMTDPEDLDALDMTVEIVSSY VANNAIQSDQLPALIKSVHATLSDLTNTVPVPAEKLEPAVAINKSVTPEFLICLEDGAKLKMLKRYLRTRFDMTPEDYRA KWGLPADYPMVAPNYAKLRSKHAKQIGLGKKR
Sequences:
>Translated_192_residues MQAGSATATRSSTEIQLEWKNNRRRDEKDRPILYEPYRLYLDKRRIARIVAAITGCMGWTMTDPEDLDALDMTVEIVSSY VANNAIQSDQLPALIKSVHATLSDLTNTVPVPAEKLEPAVAINKSVTPEFLICLEDGAKLKMLKRYLRTRFDMTPEDYRA KWGLPADYPMVAPNYAKLRSKHAKQIGLGKKR >Mature_192_residues MQAGSATATRSSTEIQLEWKNNRRRDEKDRPILYEPYRLYLDKRRIARIVAAITGCMGWTMTDPEDLDALDMTVEIVSSY VANNAIQSDQLPALIKSVHATLSDLTNTVPVPAEKLEPAVAINKSVTPEFLICLEDGAKLKMLKRYLRTRFDMTPEDYRA KWGLPADYPMVAPNYAKLRSKHAKQIGLGKKR
Specific function: Could be involved in the regulation of exopolysaccharide synthesis [H]
COG id: COG4957
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ros/mucR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008807 [H]
Pfam domain/function: PF05443 ROS_MUCR [H]
EC number: NA
Molecular weight: Translated: 21754; Mature: 21754
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAGSATATRSSTEIQLEWKNNRRRDEKDRPILYEPYRLYLDKRRIARIVAAITGCMGWT CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCC MTDPEDLDALDMTVEIVSSYVANNAIQSDQLPALIKSVHATLSDLTNTVPVPAEKLEPAV CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHH AINKSVTPEFLICLEDGAKLKMLKRYLRTRFDMTPEDYRAKWGLPADYPMVAPNYAKLRS EECCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCHHHHHH KHAKQIGLGKKR HHHHHHCCCCCC >Mature Secondary Structure MQAGSATATRSSTEIQLEWKNNRRRDEKDRPILYEPYRLYLDKRRIARIVAAITGCMGWT CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCC MTDPEDLDALDMTVEIVSSYVANNAIQSDQLPALIKSVHATLSDLTNTVPVPAEKLEPAV CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHH AINKSVTPEFLICLEDGAKLKMLKRYLRTRFDMTPEDYRAKWGLPADYPMVAPNYAKLRS EECCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCHHHHHH KHAKQIGLGKKR HHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]