| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is sam [H]
Identifier: 114800316
GI number: 114800316
Start: 3505583
End: 3506545
Strand: Direct
Name: sam [H]
Synonym: HNE_3359
Alternate gene names: 114800316
Gene position: 3505583-3506545 (Clockwise)
Preceding gene: 114798306
Following gene: 114797778
Centisome position: 94.62
GC content: 60.96
Gene sequence:
>963_bases ATGAGCGGCAAGATACCTTCAGGATCAGACACTTCTGTAAGCGGGCCCGGACTTTCGGGCAATCTTCAGGGCGCGCTGTG GATGCTGGTGTCGGGCGCGGGCTACACAGTTCACATTGCCCTGGCCAAAGAGATCACCGCCGACGCGCACCCGATTTTCC TGGCGTTCTGGCGCAGTTTTCTGGCGTTTGCGATTGCCATGCCGTTCGTCTGGATCGGGGGCGTGAAGATCCACACTGCC CGGTTTGGCGCGCTGGTGACGCGCAGTCTGATCGGGTCGGCGGGGTTTGTGTTCGGGCTGATTGCCATCTGGCCGATCTT TGAGTTGCCGCTGGCGGAGTTCAATGCGCTGTCGTTTACGCGGCCGCTGTTTGTGACGTTGCTGGCCATTGTGCTGCTGC ATGAGAAGGTGGGGCTGCAGCGCGGCGGGGCGGTGGTCATCGGCTTTGCGGGGGTGCTGATCATGACGCTGGTGCCCGCC CTTCTGGGCAGTGAGGGGGGCACGCATCTGAACCTTGGGGCCCTCTTTGCGTTGCTCTCATCGCTCTGCTTTGCGTTCAC GATTGTGCTGGTGAAATCGCTGACCGGTGTGCACTCGCCGCTGGCCCTCTTGGTATGGGCTAACATGTTGTCTTCGATCA TCATTTTGCCCTTTGCGCTGTTCTATTGGAGCAGCCCGGACCTGATGGGATGGGCGCTGATTTTCGCCATGGCTTTTGCC GGATTTGTCGCCCAGTTCTGCTTTATCAAGGGCATGTCGATTGGCGACGCCTCGTTCCTCTCGCCGCTCGATTATGTGCG CCTGCCGATGGGCGCGCTGGCCGACTGGATCATGATCCGGGCGCTTCCCGGACCGTTCGTGTGGGTGGGCGCGGGCATCA TCATCGTCTCGACGCTCTACATCACCTGGCGGGAACACCGGCTGAACCGGAAGAAGCCCGTCCTGCCACCAAAGCCCGTT TGA
Upstream 100 bases:
>100_bases GGGGTGGCCAACAGTGGCCCAACCGGTCCACATGTGACCGGCTGGCAGGCTTCGCCAAAGCTGGTCGATCTGGTCGATTT CTTCAGATGAAAAGCGTGGC
Downstream 100 bases:
>100_bases GCCTGCCAAATCCCGGACAAACCGGGACACTTCCGGACAGTCTGGGACATCTCAGGACACTTTGAGACAAGGTGAGACGC CCTTCCCCAGATTCCCCTTG
Product: putative transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MSGKIPSGSDTSVSGPGLSGNLQGALWMLVSGAGYTVHIALAKEITADAHPIFLAFWRSFLAFAIAMPFVWIGGVKIHTA RFGALVTRSLIGSAGFVFGLIAIWPIFELPLAEFNALSFTRPLFVTLLAIVLLHEKVGLQRGGAVVIGFAGVLIMTLVPA LLGSEGGTHLNLGALFALLSSLCFAFTIVLVKSLTGVHSPLALLVWANMLSSIIILPFALFYWSSPDLMGWALIFAMAFA GFVAQFCFIKGMSIGDASFLSPLDYVRLPMGALADWIMIRALPGPFVWVGAGIIIVSTLYITWREHRLNRKKPVLPPKPV
Sequences:
>Translated_320_residues MSGKIPSGSDTSVSGPGLSGNLQGALWMLVSGAGYTVHIALAKEITADAHPIFLAFWRSFLAFAIAMPFVWIGGVKIHTA RFGALVTRSLIGSAGFVFGLIAIWPIFELPLAEFNALSFTRPLFVTLLAIVLLHEKVGLQRGGAVVIGFAGVLIMTLVPA LLGSEGGTHLNLGALFALLSSLCFAFTIVLVKSLTGVHSPLALLVWANMLSSIIILPFALFYWSSPDLMGWALIFAMAFA GFVAQFCFIKGMSIGDASFLSPLDYVRLPMGALADWIMIRALPGPFVWVGAGIIIVSTLYITWREHRLNRKKPVLPPKPV >Mature_319_residues SGKIPSGSDTSVSGPGLSGNLQGALWMLVSGAGYTVHIALAKEITADAHPIFLAFWRSFLAFAIAMPFVWIGGVKIHTAR FGALVTRSLIGSAGFVFGLIAIWPIFELPLAEFNALSFTRPLFVTLLAIVLLHEKVGLQRGGAVVIGFAGVLIMTLVPAL LGSEGGTHLNLGALFALLSSLCFAFTIVLVKSLTGVHSPLALLVWANMLSSIIILPFALFYWSSPDLMGWALIFAMAFAG FVAQFCFIKGMSIGDASFLSPLDYVRLPMGALADWIMIRALPGPFVWVGAGIIIVSTLYITWREHRLNRKKPVLPPKPV
Specific function: Transports S-adenosylmethionine [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 34313; Mature: 34181
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKIPSGSDTSVSGPGLSGNLQGALWMLVSGAGYTVHIALAKEITADAHPIFLAFWRSF CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEHHHCCCCCHHHHHHHHHH LAFAIAMPFVWIGGVKIHTARFGALVTRSLIGSAGFVFGLIAIWPIFELPLAEFNALSFT HHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH RPLFVTLLAIVLLHEKVGLQRGGAVVIGFAGVLIMTLVPALLGSEGGTHLNLGALFALLS HHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHH SLCFAFTIVLVKSLTGVHSPLALLVWANMLSSIIILPFALFYWSSPDLMGWALIFAMAFA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH GFVAQFCFIKGMSIGDASFLSPLDYVRLPMGALADWIMIRALPGPFVWVGAGIIIVSTLY HHHHHHHHHHCCCCCCHHHHCHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ITWREHRLNRKKPVLPPKPV HHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SGKIPSGSDTSVSGPGLSGNLQGALWMLVSGAGYTVHIALAKEITADAHPIFLAFWRSF CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEHHHCCCCCHHHHHHHHHH LAFAIAMPFVWIGGVKIHTARFGALVTRSLIGSAGFVFGLIAIWPIFELPLAEFNALSFT HHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH RPLFVTLLAIVLLHEKVGLQRGGAVVIGFAGVLIMTLVPALLGSEGGTHLNLGALFALLS HHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHH SLCFAFTIVLVKSLTGVHSPLALLVWANMLSSIIILPFALFYWSSPDLMGWALIFAMAFA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH GFVAQFCFIKGMSIGDASFLSPLDYVRLPMGALADWIMIRALPGPFVWVGAGIIIVSTLY HHHHHHHHHHCCCCCCHHHHCHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ITWREHRLNRKKPVLPPKPV HHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA