Click here to switch to the map view.

The map label for this gene is 114800265

Identifier: 114800265

GI number: 114800265

Start: 1538187

End: 1538804

Strand: Reverse

Name: 114800265

Synonym: HNE_1505

Alternate gene names: NA

Gene position: 1538804-1538187 (Counterclockwise)

Preceding gene: 114797095

Following gene: 114797141

Centisome position: 41.53

GC content: 56.15

Gene sequence:

>618_bases
ATGTCAAACGCTGTTCCCGAAACCCGTGATCGAATCCTGAGTGCTTGTCTCACGCTGCTCGAAAACTCCGATGGCCAGGA
AGTGCGGGTAAGCGATGTTGCAGATGCCGCCGGCGTTACCCGTCAAACGCTCTATCTCTACTTTCGGAACCGGACCGAAC
TGCTTATCGCGACGACCCATTTTGTGGACGATATTAAGAATGCTGATGAACGCCTCCGGCCCAGCCGGACAGCTGGCTCC
GGCCAGGAACGTCTTGATGCCTATATTACCGCCTGGTGCACCTACATACCCGAGATTTATGGCATTTCGCGAGCATTGCT
TGTCATGAAAGACCCCGATGCCCGGCAGGCATGGGAAAGCCGGATGAAGGATATGTGGGAAGGATGTGAAGCAGCCATCC
TGGCACTGCGAGCAGACGGTCATCTGACCCCGGACTACTCGGTGAAGGAGGCCAGCGATCTCCTCTGGACACTTTTATCC
GTCAGAAACTGGGAGAACCTGCGTATCGAAAGGGGCTGGTCGCAAGCGCAATATCTCGCTGCGACGCTCACCATGGCGCA
GCGGCTTTTCGTTAAGGCACCGCCCCGGTCAGATTATATTTCCGCCACTCCCGAGTGA

Upstream 100 bases:

>100_bases
GGCACCAGGAGGGCAGGCATCTGGCTTCCTTTGATAAACTCTGATTTGACATCGTGTAAAATGCATCTATTTTACACGAT
GTCAAATGGAAGCATGAATT

Downstream 100 bases:

>100_bases
ATTGCGCGGCATTTGCCGAAGGTCATCTTCCCTCAGAGGGTGGCTGCCGGACTGGCAAAGCGTCTCCTTCCCGGGTGCTG
TCAGTCTAATGCGAACCCGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; HTH-Type Transcriptional Regulator AcrR

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MSNAVPETRDRILSACLTLLENSDGQEVRVSDVADAAGVTRQTLYLYFRNRTELLIATTHFVDDIKNADERLRPSRTAGS
GQERLDAYITAWCTYIPEIYGISRALLVMKDPDARQAWESRMKDMWEGCEAAILALRADGHLTPDYSVKEASDLLWTLLS
VRNWENLRIERGWSQAQYLAATLTMAQRLFVKAPPRSDYISATPE

Sequences:

>Translated_205_residues
MSNAVPETRDRILSACLTLLENSDGQEVRVSDVADAAGVTRQTLYLYFRNRTELLIATTHFVDDIKNADERLRPSRTAGS
GQERLDAYITAWCTYIPEIYGISRALLVMKDPDARQAWESRMKDMWEGCEAAILALRADGHLTPDYSVKEASDLLWTLLS
VRNWENLRIERGWSQAQYLAATLTMAQRLFVKAPPRSDYISATPE
>Mature_204_residues
SNAVPETRDRILSACLTLLENSDGQEVRVSDVADAAGVTRQTLYLYFRNRTELLIATTHFVDDIKNADERLRPSRTAGSG
QERLDAYITAWCTYIPEIYGISRALLVMKDPDARQAWESRMKDMWEGCEAAILALRADGHLTPDYSVKEASDLLWTLLSV
RNWENLRIERGWSQAQYLAATLTMAQRLFVKAPPRSDYISATPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23247; Mature: 23115

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNAVPETRDRILSACLTLLENSDGQEVRVSDVADAAGVTRQTLYLYFRNRTELLIATTH
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCHHHHHHEEEEECCCEEEEEHHH
FVDDIKNADERLRPSRTAGSGQERLDAYITAWCTYIPEIYGISRALLVMKDPDARQAWES
HHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHEEEEEECCCHHHHHHH
RMKDMWEGCEAAILALRADGHLTPDYSVKEASDLLWTLLSVRNWENLRIERGWSQAQYLA
HHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHH
ATLTMAQRLFVKAPPRSDYISATPE
HHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNAVPETRDRILSACLTLLENSDGQEVRVSDVADAAGVTRQTLYLYFRNRTELLIATTH
CCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCHHHHHHEEEEECCCEEEEEHHH
FVDDIKNADERLRPSRTAGSGQERLDAYITAWCTYIPEIYGISRALLVMKDPDARQAWES
HHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHEEEEEECCCHHHHHHH
RMKDMWEGCEAAILALRADGHLTPDYSVKEASDLLWTLLSVRNWENLRIERGWSQAQYLA
HHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHH
ATLTMAQRLFVKAPPRSDYISATPE
HHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA