Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114797141

Identifier: 114797141

GI number: 114797141

Start: 1533186

End: 1533989

Strand: Reverse

Name: 114797141

Synonym: HNE_1502

Alternate gene names: NA

Gene position: 1533989-1533186 (Counterclockwise)

Preceding gene: 114800265

Following gene: 114798032

Centisome position: 41.4

GC content: 63.18

Gene sequence:

>804_bases
ATGTTACACGCACTCAAAAGCCTGGTGGCCTTGGGCATCCTGCTCGCCGCCGGAAACGCAGCCAGGGCGCAGGAAATCGC
GATCGTCGGCCAACCGACCAGTCCTTATCAGGCGGAACGGACCTTCACGACGGAGGGCACGACCATCACGCAGCTGGTCT
ATTCCAGCCCGGGAAAAACCCGGACCGAGATGACCGTTGACGGCATGCAGATCATCCAGATCTGGCGGACGGACCGGAAC
CTCATCTGGTCCCTGATGCCACGCGAGCGCATGGCGATCGAACTCGCGCCGGGCAGTGACCAGGTGACCTCGCCGCTCGA
CCAGTACAGCAACGAGAGCGATCTGCGCTTCGAAAAACGCCTGATGGGCCCCGATACCGTCAACGGCGTCAGCGCCAACC
GCTACATCATCAGCGGCACAGCGGCGGATGGCAGCAAGACCGAAGGCGATGTCTGGACAACACCGCAGAACATCACCGTT
CGCATGCGCCTGACCGGTAGTGCTCCGGGCGAAGCTGACAGAAACTTCAACTACGACCTCGCCGATCTCGTACTTCAGGA
CCAGCATGAGTCGCTGTTCGAGGTCCCGTCCGACTATCAGGTCATGACCATGGGCATGGGGTATCCCGGCATGACCGGGC
AGCTCCCGGGCGCTGAAGACACAGAAGGCAACCCCGTCGGTGACTATGCCGGCGATGTGGCGCGCGACGCCGCAGGTGAA
GCCGTGCGCGAGGCCGACCGTCAGGTCCGCAGAAAAGCTGGCGACGAGGCCCGCAAGGCGGTTCGCAAGGTCCTGCCCTG
GTAG

Upstream 100 bases:

>100_bases
AAAGGCGGCCTCGATCCGCCAGTGGACAAATCTGGCGGGGAATCTGGCAGTGTTTCGTTGTTGGAGCTGACGTGCCCCGC
AACTCAGGAGGATCACACCG

Downstream 100 bases:

>100_bases
CTCTCAGAACGAACATCATTCATTGGACAGGATCAGCATCATGAACGCCCTTAAATTGAGCCTGGCGACCCTTGGCCTCT
CGCTTCTGGTCGCTGGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MLHALKSLVALGILLAAGNAARAQEIAIVGQPTSPYQAERTFTTEGTTITQLVYSSPGKTRTEMTVDGMQIIQIWRTDRN
LIWSLMPRERMAIELAPGSDQVTSPLDQYSNESDLRFEKRLMGPDTVNGVSANRYIISGTAADGSKTEGDVWTTPQNITV
RMRLTGSAPGEADRNFNYDLADLVLQDQHESLFEVPSDYQVMTMGMGYPGMTGQLPGAEDTEGNPVGDYAGDVARDAAGE
AVREADRQVRRKAGDEARKAVRKVLPW

Sequences:

>Translated_267_residues
MLHALKSLVALGILLAAGNAARAQEIAIVGQPTSPYQAERTFTTEGTTITQLVYSSPGKTRTEMTVDGMQIIQIWRTDRN
LIWSLMPRERMAIELAPGSDQVTSPLDQYSNESDLRFEKRLMGPDTVNGVSANRYIISGTAADGSKTEGDVWTTPQNITV
RMRLTGSAPGEADRNFNYDLADLVLQDQHESLFEVPSDYQVMTMGMGYPGMTGQLPGAEDTEGNPVGDYAGDVARDAAGE
AVREADRQVRRKAGDEARKAVRKVLPW
>Mature_267_residues
MLHALKSLVALGILLAAGNAARAQEIAIVGQPTSPYQAERTFTTEGTTITQLVYSSPGKTRTEMTVDGMQIIQIWRTDRN
LIWSLMPRERMAIELAPGSDQVTSPLDQYSNESDLRFEKRLMGPDTVNGVSANRYIISGTAADGSKTEGDVWTTPQNITV
RMRLTGSAPGEADRNFNYDLADLVLQDQHESLFEVPSDYQVMTMGMGYPGMTGQLPGAEDTEGNPVGDYAGDVARDAAGE
AVREADRQVRRKAGDEARKAVRKVLPW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29182; Mature: 29182

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHALKSLVALGILLAAGNAARAQEIAIVGQPTSPYQAERTFTTEGTTITQLVYSSPGKT
CHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEECCCCEEEEEEECCCCCC
RTEMTVDGMQIIQIWRTDRNLIWSLMPRERMAIELAPGSDQVTSPLDQYSNESDLRFEKR
EEEEEECHHHEEHHHHCCCHHEEEECCCCCEEEEECCCCCHHHCHHHHHCCCCCCHHHHH
LMGPDTVNGVSANRYIISGTAADGSKTEGDVWTTPQNITVRMRLTGSAPGEADRNFNYDL
HCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEECCCCEEEEEEEECCCCCCCCCCCCCCH
ADLVLQDQHESLFEVPSDYQVMTMGMGYPGMTGQLPGAEDTEGNPVGDYAGDVARDAAGE
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
AVREADRQVRRKAGDEARKAVRKVLPW
HHHHHHHHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure
MLHALKSLVALGILLAAGNAARAQEIAIVGQPTSPYQAERTFTTEGTTITQLVYSSPGKT
CHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEECCCCEEEEEEECCCCCC
RTEMTVDGMQIIQIWRTDRNLIWSLMPRERMAIELAPGSDQVTSPLDQYSNESDLRFEKR
EEEEEECHHHEEHHHHCCCHHEEEECCCCCEEEEECCCCCHHHCHHHHHCCCCCCHHHHH
LMGPDTVNGVSANRYIISGTAADGSKTEGDVWTTPQNITVRMRLTGSAPGEADRNFNYDL
HCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEECCCCEEEEEEEECCCCCCCCCCCCCCH
ADLVLQDQHESLFEVPSDYQVMTMGMGYPGMTGQLPGAEDTEGNPVGDYAGDVARDAAGE
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
AVREADRQVRRKAGDEARKAVRKVLPW
HHHHHHHHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA