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The map label for this gene is tapC [H]

Identifier: 114800215

GI number: 114800215

Start: 2660448

End: 2661635

Strand: Direct

Name: tapC [H]

Synonym: HNE_2518

Alternate gene names: 114800215

Gene position: 2660448-2661635 (Clockwise)

Preceding gene: 114799031

Following gene: 114797104

Centisome position: 71.81

GC content: 67.0

Gene sequence:

>1188_bases
ATGACGCAGTTCCGCTACATTTCTGTCGGCCCAGACGGGACCCGGAAGTCTGGCCGGCTGGACGCGCCCGGCGAGGCCGA
TGCGCGCCGACTCATTTCGGCAAATGGGGATCTGCTTGTTGATCTGCAGGACGTCTCAAAGCGAACCTGGTTTCGCCTGG
AGCGCCGGACAGACGTTCCGCCGGCTGCCGCGGCGGAATTTGCCCTCGAATTGTCAGGGCTCCTCAGGGCGGGCGCGCCC
ATGCGTAGGGCGCTCGATATCCAGTCGGGCGGCGCGGGGCCGACCGCGAAGCTTGCCGGCGCGGTTCTCGCTCATGTCGA
GAATGGTGGCTCGCTCTCCGAGGGGCTCCGTCAGGCCGGGGGCAGCGCAGTGATGCTTGCCGAGTTTGCTGCTGCGGGCG
AAGCTGGCGCGGGCCTTGACACATTGATGGAAAGTGGCGGCCGGTTCCTGAAGGCCCGTATCGAGGCCATCAGCCGTATC
CGGAACGCGCTCGCCTACCCGCTCTTCATCGCGCTTCTGGGGCTCGTCGCTGTGAGCGTGATCACGATCTATGTGGCCCC
CGCGCTCGCGCCCACGCTGAAAGGAACCGGACAGGGCGGGTTCGTTATCTGGCTCGCCGGCCTCGGCGCCTGGACGCAGG
CGCATATCTCCTGGCTGGCGGCAGGCTTGGCCACCTGTGTGCTCGTCACATCCCTGATTCTGGGACGTGCGTCGGTGAGG
CGGCGCCTCGCCGCGGGTCTCTGGTCCCTGCCCATCCTCGGCCCTATCGCACGCGACCTGGACGTTGGCCAGTCCTGCGA
CGTTCTCTCCGCGCTTCTGGCGGCCGGGCGGCCGCTGGAAAGTGCGCTACGCTTTGCGGCAGCGGTCTCCGGACCGCACC
TGGCGAGCGTCTATGACACGATCGGTCAGAACATTCGGGACGGTCAGGTCGCAGGCGCAGCCTTTGCTGCAGCGGCCGGA
TTGCCCCCTGAAGTCAGGCGTCTTGCTCTGCTCGGCGAAAAGTCGAGCGCGTTCGCCAGCGCCATGCGTCAGGCCGGGCA
GATCTGTCATGACCGGGCCCTGCGCCGGATCGACCGGTTCGCCGCCCTCGTCGGCCCGGTCCTGGTAATCGGCATGGGCG
CCGCCATCGCGCTTCTGATGCTCAGTATTCTGGGCACGCTTTCGGGCATCGGAGACAGCGTACTATGA

Upstream 100 bases:

>100_bases
GCGCTGCGCCCGATCGCGGCCAGACGCTAATGGCGCAGGGTCTGCAGCTGGTCATCCGTGGAGAGACCAGTTTGGCAGAA
ATAGCGGGTCTGAGCGAAGC

Downstream 100 bases:

>100_bases
GACAGGATCGCGGATTTGCCATGGCCGACGCGCTGATCGCGCTTCTGCTGACCTCGCTCTTTCTGAGCGGATTGCTGTCT
GTGAATGCAACCACGCTCCG

Product: type II secretion system protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MTQFRYISVGPDGTRKSGRLDAPGEADARRLISANGDLLVDLQDVSKRTWFRLERRTDVPPAAAAEFALELSGLLRAGAP
MRRALDIQSGGAGPTAKLAGAVLAHVENGGSLSEGLRQAGGSAVMLAEFAAAGEAGAGLDTLMESGGRFLKARIEAISRI
RNALAYPLFIALLGLVAVSVITIYVAPALAPTLKGTGQGGFVIWLAGLGAWTQAHISWLAAGLATCVLVTSLILGRASVR
RRLAAGLWSLPILGPIARDLDVGQSCDVLSALLAAGRPLESALRFAAAVSGPHLASVYDTIGQNIRDGQVAGAAFAAAAG
LPPEVRRLALLGEKSSAFASAMRQAGQICHDRALRRIDRFAALVGPVLVIGMGAAIALLMLSILGTLSGIGDSVL

Sequences:

>Translated_395_residues
MTQFRYISVGPDGTRKSGRLDAPGEADARRLISANGDLLVDLQDVSKRTWFRLERRTDVPPAAAAEFALELSGLLRAGAP
MRRALDIQSGGAGPTAKLAGAVLAHVENGGSLSEGLRQAGGSAVMLAEFAAAGEAGAGLDTLMESGGRFLKARIEAISRI
RNALAYPLFIALLGLVAVSVITIYVAPALAPTLKGTGQGGFVIWLAGLGAWTQAHISWLAAGLATCVLVTSLILGRASVR
RRLAAGLWSLPILGPIARDLDVGQSCDVLSALLAAGRPLESALRFAAAVSGPHLASVYDTIGQNIRDGQVAGAAFAAAAG
LPPEVRRLALLGEKSSAFASAMRQAGQICHDRALRRIDRFAALVGPVLVIGMGAAIALLMLSILGTLSGIGDSVL
>Mature_394_residues
TQFRYISVGPDGTRKSGRLDAPGEADARRLISANGDLLVDLQDVSKRTWFRLERRTDVPPAAAAEFALELSGLLRAGAPM
RRALDIQSGGAGPTAKLAGAVLAHVENGGSLSEGLRQAGGSAVMLAEFAAAGEAGAGLDTLMESGGRFLKARIEAISRIR
NALAYPLFIALLGLVAVSVITIYVAPALAPTLKGTGQGGFVIWLAGLGAWTQAHISWLAAGLATCVLVTSLILGRASVRR
RLAAGLWSLPILGPIARDLDVGQSCDVLSALLAAGRPLESALRFAAAVSGPHLASVYDTIGQNIRDGQVAGAAFAAAAGL
PPEVRRLALLGEKSSAFASAMRQAGQICHDRALRRIDRFAALVGPVLVIGMGAAIALLMLSILGTLSGIGDSVL

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=400, Percent_Identity=22, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 40661; Mature: 40530

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQFRYISVGPDGTRKSGRLDAPGEADARRLISANGDLLVDLQDVSKRTWFRLERRTDVP
CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCC
PAAAAEFALELSGLLRAGAPMRRALDIQSGGAGPTAKLAGAVLAHVENGGSLSEGLRQAG
CHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCC
GSAVMLAEFAAAGEAGAGLDTLMESGGRFLKARIEAISRIRNALAYPLFIALLGLVAVSV
CCEEHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITIYVAPALAPTLKGTGQGGFVIWLAGLGAWTQAHISWLAAGLATCVLVTSLILGRASVR
HHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRLAAGLWSLPILGPIARDLDVGQSCDVLSALLAAGRPLESALRFAAAVSGPHLASVYDT
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHH
IGQNIRDGQVAGAAFAAAAGLPPEVRRLALLGEKSSAFASAMRQAGQICHDRALRRIDRF
HCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AALVGPVLVIGMGAAIALLMLSILGTLSGIGDSVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TQFRYISVGPDGTRKSGRLDAPGEADARRLISANGDLLVDLQDVSKRTWFRLERRTDVP
CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCC
PAAAAEFALELSGLLRAGAPMRRALDIQSGGAGPTAKLAGAVLAHVENGGSLSEGLRQAG
CHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCC
GSAVMLAEFAAAGEAGAGLDTLMESGGRFLKARIEAISRIRNALAYPLFIALLGLVAVSV
CCEEHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITIYVAPALAPTLKGTGQGGFVIWLAGLGAWTQAHISWLAAGLATCVLVTSLILGRASVR
HHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRLAAGLWSLPILGPIARDLDVGQSCDVLSALLAAGRPLESALRFAAAVSGPHLASVYDT
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHH
IGQNIRDGQVAGAAFAAAAGLPPEVRRLALLGEKSSAFASAMRQAGQICHDRALRRIDRF
HCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AALVGPVLVIGMGAAIALLMLSILGTLSGIGDSVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]