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The map label for this gene is ytfL [C]

Identifier: 114800187

GI number: 114800187

Start: 57668

End: 58975

Strand: Direct

Name: ytfL [C]

Synonym: HNE_0072

Alternate gene names: 114800187

Gene position: 57668-58975 (Clockwise)

Preceding gene: 114799723

Following gene: 114799436

Centisome position: 1.56

GC content: 62.16

Gene sequence:

>1308_bases
ATGGACCTTTTGCTCCTTATAGCGCTCATAGCGCTTAACGGCGTTTTCGCGATGTCGGAACTTGCCGTTGTTTCCGCCCG
CCGCGCCCGCCTTCAGATGATGGCAGACAAGGGCAATCTGGGCGCCCGCGCAGCGCTCAAATTGCAGGAAGACCCTTCGC
GCTTTCTCTCGACCGTCCAGATCGGCATCACGCTGGTCGGCATCGTGGCCGGCGCCTATGGCGCAACGGCGCTGGCGGAA
GATGTGGTACCGCTGATTGTCCGCTTCGCCCCGGCGCTTGAAGACAACGCGGCCTTCATCGCCTTTGCCGTGGTGATCGT
GTTCACCACCTATCTGTCGCTGATCATCGGGGAGCTTGTGCCCAAGCGCGTTGCGCTGGCCGCGCCTGAAGCCTTTGCCG
CCGTCGTGGCGCCGCCGATGGCGATGCTGTCGAAGATTGCCTTTCCCATCGTGTTCATCCTGCGGGGCTCAACCAATCTG
ATCCTCTCCCTGATCGGCATGGGCAAGATGCGCATCGACAGCGTCACTGAGGAAGAAATCGAAAGCATGATCGAAGAAGG
CGCCGCCAGCGGGGCGATCGACGCCGAAGAACGCACGATGATCCGCAGCGTGATGCGCCTGGCCGACCGGGACGTGCGCT
CGATCATGACGCCGCGCAACGAGGTTGTCTGGCTGGACCTGGATGATCCGTCTGAAGACCTTCTGAAGGAAATGTCGGTT
AGCGGGCATTCGCGCTTTCCGGTCGCGCGCGGCGATCTGGAGCATGTGACCGCGATTGTTCAGACGAAGGATGTTCTCGC
CCAGTCCGGCGGTGTGCGTCTGCCGAAGTTTGAAGATGTCGGCCATGAGCCGCTCTTCGTGCCAGAGACAATGAGCGTAC
TGCGCGTGCTGGAAAGCATGCAGGCAAGCCCGGTTCAGATGGCGCTGGTGGTGGATGAGCTGGGCCATGTCGAAGGCATT
GTCACCGCCGCCGATGTGCTGGGCGCCATCGCAGGGGATGTGGCCTTCTCGCTGGCCGATGGGCTCGACCGGCCCCAGCT
GCGCGAAGATGGCAGCTGGCTGATCGATGGCCGCATGGCGGTTGAAGATGTCGAGATCGTGCTCGGCGTGTCAAATATCG
GCGCCGATGATGATCCGTTCTCAACCGTTGCCGGCCTCGTGATGCACCATCTTCAGCGCGTGCCGGAGTTGGGCGACAAG
GCCCGTGTCAACGGGTGGATGTTCGAGGTGATCGACATGGACGGCCGGCGCCTCGACAAGGTGCTGGTCTCGCGCGTCAA
CGCCAAGGATGAAGACCCCTCAGGCTGA

Upstream 100 bases:

>100_bases
TGGCCGCGCTCTTAGCGGGGGCAGGGGAGCATGGCAATTAAGCCGCCCCCAGAAATGTCGCTTGGCGGAAATCGCAGATT
GCGGCATATGGCGCGCCATC

Downstream 100 bases:

>100_bases
GCCGGGCAGGGGCGCCTAGAGGCTGCCCTTGGTGCTGGCCGGTTTGCCGCCAAGGCGCGGGTCCACCGTGATGGCGGTGC
GCAGGGCGCGGGCTGTCGCC

Product: putative transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MDLLLLIALIALNGVFAMSELAVVSARRARLQMMADKGNLGARAALKLQEDPSRFLSTVQIGITLVGIVAGAYGATALAE
DVVPLIVRFAPALEDNAAFIAFAVVIVFTTYLSLIIGELVPKRVALAAPEAFAAVVAPPMAMLSKIAFPIVFILRGSTNL
ILSLIGMGKMRIDSVTEEEIESMIEEGAASGAIDAEERTMIRSVMRLADRDVRSIMTPRNEVVWLDLDDPSEDLLKEMSV
SGHSRFPVARGDLEHVTAIVQTKDVLAQSGGVRLPKFEDVGHEPLFVPETMSVLRVLESMQASPVQMALVVDELGHVEGI
VTAADVLGAIAGDVAFSLADGLDRPQLREDGSWLIDGRMAVEDVEIVLGVSNIGADDDPFSTVAGLVMHHLQRVPELGDK
ARVNGWMFEVIDMDGRRLDKVLVSRVNAKDEDPSG

Sequences:

>Translated_435_residues
MDLLLLIALIALNGVFAMSELAVVSARRARLQMMADKGNLGARAALKLQEDPSRFLSTVQIGITLVGIVAGAYGATALAE
DVVPLIVRFAPALEDNAAFIAFAVVIVFTTYLSLIIGELVPKRVALAAPEAFAAVVAPPMAMLSKIAFPIVFILRGSTNL
ILSLIGMGKMRIDSVTEEEIESMIEEGAASGAIDAEERTMIRSVMRLADRDVRSIMTPRNEVVWLDLDDPSEDLLKEMSV
SGHSRFPVARGDLEHVTAIVQTKDVLAQSGGVRLPKFEDVGHEPLFVPETMSVLRVLESMQASPVQMALVVDELGHVEGI
VTAADVLGAIAGDVAFSLADGLDRPQLREDGSWLIDGRMAVEDVEIVLGVSNIGADDDPFSTVAGLVMHHLQRVPELGDK
ARVNGWMFEVIDMDGRRLDKVLVSRVNAKDEDPSG
>Mature_435_residues
MDLLLLIALIALNGVFAMSELAVVSARRARLQMMADKGNLGARAALKLQEDPSRFLSTVQIGITLVGIVAGAYGATALAE
DVVPLIVRFAPALEDNAAFIAFAVVIVFTTYLSLIIGELVPKRVALAAPEAFAAVVAPPMAMLSKIAFPIVFILRGSTNL
ILSLIGMGKMRIDSVTEEEIESMIEEGAASGAIDAEERTMIRSVMRLADRDVRSIMTPRNEVVWLDLDDPSEDLLKEMSV
SGHSRFPVARGDLEHVTAIVQTKDVLAQSGGVRLPKFEDVGHEPLFVPETMSVLRVLESMQASPVQMALVVDELGHVEGI
VTAADVLGAIAGDVAFSLADGLDRPQLREDGSWLIDGRMAVEDVEIVLGVSNIGADDDPFSTVAGLVMHHLQRVPELGDK
ARVNGWMFEVIDMDGRRLDKVLVSRVNAKDEDPSG

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=386, Percent_Identity=27.2020725388601, Blast_Score=166, Evalue=3e-41,
Organism=Escherichia coli, GI1790664, Length=439, Percent_Identity=31.6628701594533, Blast_Score=254, Evalue=1e-68,
Organism=Escherichia coli, GI145693175, Length=417, Percent_Identity=27.5779376498801, Blast_Score=145, Evalue=5e-36,
Organism=Escherichia coli, GI87082033, Length=254, Percent_Identity=32.6771653543307, Blast_Score=132, Evalue=5e-32,
Organism=Escherichia coli, GI1788119, Length=245, Percent_Identity=35.5102040816327, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1786879, Length=273, Percent_Identity=29.3040293040293, Blast_Score=109, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 46754; Mature: 46754

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLLLLIALIALNGVFAMSELAVVSARRARLQMMADKGNLGARAALKLQEDPSRFLSTVQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHH
IGITLVGIVAGAYGATALAEDVVPLIVRFAPALEDNAAFIAFAVVIVFTTYLSLIIGELV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
PKRVALAAPEAFAAVVAPPMAMLSKIAFPIVFILRGSTNLILSLIGMGKMRIDSVTEEEI
HHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHEECCCHHHHHHHHCCCCHHHCCCCHHHH
ESMIEEGAASGAIDAEERTMIRSVMRLADRDVRSIMTPRNEVVWLDLDDPSEDLLKEMSV
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCC
SGHSRFPVARGDLEHVTAIVQTKDVLAQSGGVRLPKFEDVGHEPLFVPETMSVLRVLESM
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHH
QASPVQMALVVDELGHVEGIVTAADVLGAIAGDVAFSLADGLDRPQLREDGSWLIDGRMA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCH
VEDVEIVLGVSNIGADDDPFSTVAGLVMHHLQRVPELGDKARVNGWMFEVIDMDGRRLDK
HHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEEEECCCCHHHHH
VLVSRVNAKDEDPSG
HHHHHHCCCCCCCCC
>Mature Secondary Structure
MDLLLLIALIALNGVFAMSELAVVSARRARLQMMADKGNLGARAALKLQEDPSRFLSTVQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHH
IGITLVGIVAGAYGATALAEDVVPLIVRFAPALEDNAAFIAFAVVIVFTTYLSLIIGELV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
PKRVALAAPEAFAAVVAPPMAMLSKIAFPIVFILRGSTNLILSLIGMGKMRIDSVTEEEI
HHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHEECCCHHHHHHHHCCCCHHHCCCCHHHH
ESMIEEGAASGAIDAEERTMIRSVMRLADRDVRSIMTPRNEVVWLDLDDPSEDLLKEMSV
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCC
SGHSRFPVARGDLEHVTAIVQTKDVLAQSGGVRLPKFEDVGHEPLFVPETMSVLRVLESM
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHH
QASPVQMALVVDELGHVEGIVTAADVLGAIAGDVAFSLADGLDRPQLREDGSWLIDGRMA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCH
VEDVEIVLGVSNIGADDDPFSTVAGLVMHHLQRVPELGDKARVNGWMFEVIDMDGRRLDK
HHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEEEECCCCHHHHH
VLVSRVNAKDEDPSG
HHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]