| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is exoA [H]
Identifier: 114800176
GI number: 114800176
Start: 2808790
End: 2809815
Strand: Direct
Name: exoA [H]
Synonym: HNE_2648
Alternate gene names: 114800176
Gene position: 2808790-2809815 (Clockwise)
Preceding gene: 114799913
Following gene: 114797753
Centisome position: 75.81
GC content: 62.48
Gene sequence:
>1026_bases ATGCTGACCTCGATCAACACCGCAAGTTTCAAGCCGGCCCCTCTGGGTGTCGATCCCACCTCCATCCTGGCGGTGATCCC GGCGCTGAATGAAGCGCGCCATATAGAGACATGCATCCGCTCGCTGATGCAGGGCAGCCCGCTGCTGCGGCTCGTCCCGC TGACCGTCGCCGATGGCGGCAGCACGGACGAAACCCAGGCAATCGTGAAGCGCCTGACGGCAGAGTTTCCCAATCTGCGC CTGATAGAGAACCCCAAACGGCTGAAATCAGCAGCCATGAACCTCGCAGCCGGCGCTCATTCAGGCCCGCAGACCCGCTG GCTGGTGCGGTGTGATGCGCATTCGGTCTATCCGCAGAACTTCATCCTGCATGTGGCCGAAGCGCTGCAGCGCACCGGCG CGGCCTCGGTTGTGATCCCGATGGACGCTGTGGGCGAGACCTGTTTTGAGAAGGGCAATGCCTGGGTTGTCGATACCCTG CTCGGCTCGGGTGGCTCGGCCCATCGCGGCGGACGCAAATCCCATTATGTCGATCATGGCCACCATGCCGGCTTTGACAT CAGCTGGTTTCGCAAGGTCGGCGGGTATGACGAGACCTTCTCGCATAACGAAGACGCCGAGTACGACCACCGCCTTGGCG CCGCCGGCGGCAAGGTCTGGATGGACGCCGATATTCGCATTGAATACGTCCCGCGCGGGTCCATCCGGGCGCTGGCGCGG CAGTATTTCAACTATGGTAAAGGGCGCGCCCGGAACCTGCGAAAGCACAATCGCCAATTGAAACCCCGCCAGGCGGTGCC CATCTTTGCCCTTGTGGGCAGTGTTGGCGGGCTTCTGGCCGGCATATCCTTTCTGCCCGCACTGGCCCTGCCGATCGGCT ATCTGAGCATATTGGCCGGGGCGTCTCTGGCAATCGCCGTGCAACGCCGGTCGGTCTGCGGACTGTTTGCTGGGGTGGCC GCCGGGACAATGCACATGGCATGGGCAGCGGGATTCATTTGGGAAAGTGTTTCCGCGAACCGTTAA
Upstream 100 bases:
>100_bases ATGCAGACGGCAGTTGTCATGGTTAACCGCGCCTTGCATCAACATGGAACGGAACTTGCTGGTTTCACCCATAACCTATG GCCCAAAAGACCGGACAGGC
Downstream 100 bases:
>100_bases ATCCAACGGCGGATTTCTTGGTTTCATAAGGTTAATCGGGTAGGCTCTCTGCCTATCTGCGGATAAATGTAGAATGGCTC TGACAAGAGGAAAACTTACA
Product: putative glycosyl transferase ExoA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MLTSINTASFKPAPLGVDPTSILAVIPALNEARHIETCIRSLMQGSPLLRLVPLTVADGGSTDETQAIVKRLTAEFPNLR LIENPKRLKSAAMNLAAGAHSGPQTRWLVRCDAHSVYPQNFILHVAEALQRTGAASVVIPMDAVGETCFEKGNAWVVDTL LGSGGSAHRGGRKSHYVDHGHHAGFDISWFRKVGGYDETFSHNEDAEYDHRLGAAGGKVWMDADIRIEYVPRGSIRALAR QYFNYGKGRARNLRKHNRQLKPRQAVPIFALVGSVGGLLAGISFLPALALPIGYLSILAGASLAIAVQRRSVCGLFAGVA AGTMHMAWAAGFIWESVSANR
Sequences:
>Translated_341_residues MLTSINTASFKPAPLGVDPTSILAVIPALNEARHIETCIRSLMQGSPLLRLVPLTVADGGSTDETQAIVKRLTAEFPNLR LIENPKRLKSAAMNLAAGAHSGPQTRWLVRCDAHSVYPQNFILHVAEALQRTGAASVVIPMDAVGETCFEKGNAWVVDTL LGSGGSAHRGGRKSHYVDHGHHAGFDISWFRKVGGYDETFSHNEDAEYDHRLGAAGGKVWMDADIRIEYVPRGSIRALAR QYFNYGKGRARNLRKHNRQLKPRQAVPIFALVGSVGGLLAGISFLPALALPIGYLSILAGASLAIAVQRRSVCGLFAGVA AGTMHMAWAAGFIWESVSANR >Mature_341_residues MLTSINTASFKPAPLGVDPTSILAVIPALNEARHIETCIRSLMQGSPLLRLVPLTVADGGSTDETQAIVKRLTAEFPNLR LIENPKRLKSAAMNLAAGAHSGPQTRWLVRCDAHSVYPQNFILHVAEALQRTGAASVVIPMDAVGETCFEKGNAWVVDTL LGSGGSAHRGGRKSHYVDHGHHAGFDISWFRKVGGYDETFSHNEDAEYDHRLGAAGGKVWMDADIRIEYVPRGSIRALAR QYFNYGKGRARNLRKHNRQLKPRQAVPIFALVGSVGGLLAGISFLPALALPIGYLSILAGASLAIAVQRRSVCGLFAGVA AGTMHMAWAAGFIWESVSANR
Specific function: Glycosyltransferase required for the synthesis of succinoglycan (EPS I). Needed for the addition of the second sugar (glucose). Catalyzes the formation of a beta-1,3 linkage with the galactose lipid carrier [H]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 36707; Mature: 36707
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTSINTASFKPAPLGVDPTSILAVIPALNEARHIETCIRSLMQGSPLLRLVPLTVADGG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEEEEEECCC STDETQAIVKRLTAEFPNLRLIENPKRLKSAAMNLAAGAHSGPQTRWLVRCDAHSVYPQN CCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHH FILHVAEALQRTGAASVVIPMDAVGETCFEKGNAWVVDTLLGSGGSAHRGGRKSHYVDHG HHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCC HHAGFDISWFRKVGGYDETFSHNEDAEYDHRLGAAGGKVWMDADIRIEYVPRGSIRALAR CCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCEEEEEECCCHHHHHHH QYFNYGKGRARNLRKHNRQLKPRQAVPIFALVGSVGGLLAGISFLPALALPIGYLSILAG HHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ASLAIAVQRRSVCGLFAGVAAGTMHMAWAAGFIWESVSANR CHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLTSINTASFKPAPLGVDPTSILAVIPALNEARHIETCIRSLMQGSPLLRLVPLTVADGG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEEEEEECCC STDETQAIVKRLTAEFPNLRLIENPKRLKSAAMNLAAGAHSGPQTRWLVRCDAHSVYPQN CCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHH FILHVAEALQRTGAASVVIPMDAVGETCFEKGNAWVVDTLLGSGGSAHRGGRKSHYVDHG HHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCC HHAGFDISWFRKVGGYDETFSHNEDAEYDHRLGAAGGKVWMDADIRIEYVPRGSIRALAR CCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCEEEEEECCCHHHHHHH QYFNYGKGRARNLRKHNRQLKPRQAVPIFALVGSVGGLLAGISFLPALALPIGYLSILAG HHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ASLAIAVQRRSVCGLFAGVAAGTMHMAWAAGFIWESVSANR CHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8226645; 8246891; 11481431 [H]