| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is tauD [H]
Identifier: 114799913
GI number: 114799913
Start: 2803111
End: 2803947
Strand: Direct
Name: tauD [H]
Synonym: HNE_2643
Alternate gene names: 114799913
Gene position: 2803111-2803947 (Clockwise)
Preceding gene: 114798701
Following gene: 114800176
Centisome position: 75.66
GC content: 62.13
Gene sequence:
>837_bases ATGACCCTGACTGTTACACCCTCTGATATGGCCTGCGGCGCGCAGGTGCGCGGGCTGGATTTATCGAAGCCGGTTACCAC GGACCTGGCGGCGGAAATCCGGGACATCTGGCTGAAGCATCAGGTGCTCTGCTTTCCCGAGCAGAACCTCAGCGATGATG ACCTCGAACGCTTTACCCTCGCCTTCGGGCCGTTTGGCGATGATCCGTTCATTGCGCCGATACCGGGGCGCAAACACATC ATCGCGGTGAAGCGGGCGGCGGGCGAGACCTCGCCGATCTTTGCCGAGAGCTGGCATTCAGACTGGAGCTTTCAGGTAAA GCCGCCGCAGGGCACCTGCCTTTATGGCATCACCATTCCGCCCGAGGGCGGGGATACGCTGTTCGTGAACCAGTATAAGG CTTTGGCCGAGATGCCGGAGGATCTGCGCCGGCGGATCGAGGGAAAGAAGGCGGTCCATTCAGCGAAGAATGCCTATTCC CCGAAAGGCATGTATGGCGCAGGCGATAAAGGCCGCAGCATGGACATCCGCGCCTCGGACGAAGCGGAGGCGGCCAATAC GCACCCCTTCATCCGTACACACCCGGAAACCGGCCGCGAAAGCCTGTTTGGCTGCGCCGGCTATATCGTGGGCGTAGAGG GCATGGAGCAACAGGAGGGCTGGGACCTCATCACCGAGGTTTACCGCTGGCAGACGCGGCCGGAATTCCAATACCGCCAC CGCTGGGAAAAAGGCATGCTGTTGATGTGGGACAACCGCTGCACGCTGCACATGGCCACCGGCGGCTATGCCGGGCACGA CCGGCTGCTGCACCGCACGACGATCGGGTCCGCCTAA
Upstream 100 bases:
>100_bases CGTCATCCTCAAGGCCGGCGGCGGAAAAAAGATCGCTCATGGGTGTCTTCTAGGACTTTGGTGGCGGCGTGGTAAGGTGG GGATTGGGAGGAAATATAAA
Downstream 100 bases:
>100_bases AACAAAAGGCACACATTATAACGAGCCAAGGTCCCGGATCGGCCCTTTGGGCCGTCCGGGATGACACTTCACGGGATCAG GTGCGCACTGTGCCTCGCAC
Product: TauD/TfdA family dioxygenase
Products: NA
Alternate protein names: 2-aminoethanesulfonate dioxygenase; Sulfate starvation-induced protein 3; SSI3 [H]
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MTLTVTPSDMACGAQVRGLDLSKPVTTDLAAEIRDIWLKHQVLCFPEQNLSDDDLERFTLAFGPFGDDPFIAPIPGRKHI IAVKRAAGETSPIFAESWHSDWSFQVKPPQGTCLYGITIPPEGGDTLFVNQYKALAEMPEDLRRRIEGKKAVHSAKNAYS PKGMYGAGDKGRSMDIRASDEAEAANTHPFIRTHPETGRESLFGCAGYIVGVEGMEQQEGWDLITEVYRWQTRPEFQYRH RWEKGMLLMWDNRCTLHMATGGYAGHDRLLHRTTIGSA
Sequences:
>Translated_278_residues MTLTVTPSDMACGAQVRGLDLSKPVTTDLAAEIRDIWLKHQVLCFPEQNLSDDDLERFTLAFGPFGDDPFIAPIPGRKHI IAVKRAAGETSPIFAESWHSDWSFQVKPPQGTCLYGITIPPEGGDTLFVNQYKALAEMPEDLRRRIEGKKAVHSAKNAYS PKGMYGAGDKGRSMDIRASDEAEAANTHPFIRTHPETGRESLFGCAGYIVGVEGMEQQEGWDLITEVYRWQTRPEFQYRH RWEKGMLLMWDNRCTLHMATGGYAGHDRLLHRTTIGSA >Mature_277_residues TLTVTPSDMACGAQVRGLDLSKPVTTDLAAEIRDIWLKHQVLCFPEQNLSDDDLERFTLAFGPFGDDPFIAPIPGRKHII AVKRAAGETSPIFAESWHSDWSFQVKPPQGTCLYGITIPPEGGDTLFVNQYKALAEMPEDLRRRIEGKKAVHSAKNAYSP KGMYGAGDKGRSMDIRASDEAEAANTHPFIRTHPETGRESLFGCAGYIVGVEGMEQQEGWDLITEVYRWQTRPEFQYRHR WEKGMLLMWDNRCTLHMATGGYAGHDRLLHRTTIGSA
Specific function: Catalyzes the conversion of taurine and alpha ketoglutarate to sulfite, aminoacetaldehyde and succinate. Required for the utilization of taurine (2-aminoethanesulfonic acid) as an alternative sulfur source. Pentane-sulfonic acid, 3- (N-morpholino)propanes
COG id: COG2175
COG function: function code Q; Probable taurine catabolism dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tfdA dioxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786565, Length=276, Percent_Identity=28.9855072463768, Blast_Score=134, Evalue=9e-33, Organism=Saccharomyces cerevisiae, GI6322971, Length=272, Percent_Identity=24.6323529411765, Blast_Score=79, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003819 [H]
Pfam domain/function: PF02668 TauD [H]
EC number: =1.14.11.17 [H]
Molecular weight: Translated: 31141; Mature: 31009
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTVTPSDMACGAQVRGLDLSKPVTTDLAAEIRDIWLKHQVLCFPEQNLSDDDLERFTL CEEEECCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCCHHHEEEE AFGPFGDDPFIAPIPGRKHIIAVKRAAGETSPIFAESWHSDWSFQVKPPQGTCLYGITIP EECCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEC PEGGDTLFVNQYKALAEMPEDLRRRIEGKKAVHSAKNAYSPKGMYGAGDKGRSMDIRASD CCCCCEEEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCC EAEAANTHPFIRTHPETGRESLFGCAGYIVGVEGMEQQEGWDLITEVYRWQTRPEFQYRH CCCCCCCCCEEEECCCCCHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHH RWEKGMLLMWDNRCTLHMATGGYAGHDRLLHRTTIGSA HCCCCCEEEECCCEEEEEECCCCCCCHHEEEECCCCCC >Mature Secondary Structure TLTVTPSDMACGAQVRGLDLSKPVTTDLAAEIRDIWLKHQVLCFPEQNLSDDDLERFTL EEEECCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCCHHHEEEE AFGPFGDDPFIAPIPGRKHIIAVKRAAGETSPIFAESWHSDWSFQVKPPQGTCLYGITIP EECCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEC PEGGDTLFVNQYKALAEMPEDLRRRIEGKKAVHSAKNAYSPKGMYGAGDKGRSMDIRASD CCCCCEEEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCC EAEAANTHPFIRTHPETGRESLFGCAGYIVGVEGMEQQEGWDLITEVYRWQTRPEFQYRH CCCCCCCCCEEEECCCCCHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHH RWEKGMLLMWDNRCTLHMATGGYAGHDRLLHRTTIGSA HCCCCCEEEECCCEEEEEECCCCCCCHHEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 2656410; 8774726; 7984428; 9287300; 11955067 [H]