| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is pmi [H]
Identifier: 114800103
GI number: 114800103
Start: 22276
End: 23418
Strand: Reverse
Name: pmi [H]
Synonym: HNE_0032
Alternate gene names: 114800103
Gene position: 23418-22276 (Counterclockwise)
Preceding gene: 114798513
Following gene: 114797148
Centisome position: 0.63
GC content: 64.39
Gene sequence:
>1143_bases ATGTCGGTATCAGCGCTTCAAAGGCGGGCCAGAGAGGCCAGATGTTGGCTGCTCGACAGCTGTTTTCCGCTCTGGGCCGA TCATGGCGTGAACGAAGCCGGGCTTTTCCCCGAATCGTTGACCACATCTCTGGATGAAGCACCGGCCGAATACACCCGCG TGCGCGTGCAGGCACGCCAGACTTATGTGTTTTCCGAAGCCTGGCGGCTCGGCTGGAAACGGGACACGGCCGCAAAGCTG GTAAATGCCGGTGTCGCCACCCTTGCCGGGCGCGCGCTCAATGCGCAGGGTCTGGCCGGGCGCACGCTTTCGACCTCCAG CGGCCATCTCGTCGATGTGACATCGGACCTTTATGACACCGCCTTTGTGCTGTTCAGCCTGGCCGAAGCTGCGCGCGGAC CTGGGCCGGCAGAGCCAGCAATGGCCGCTGCCCAAGGCATCCTCATGAACCTTGAGAAAAGTGCCCGCGATGCTGCGCAA GGCGGGTATGCCGAGACCCTGCCCCCACCTGCGCACCGCCAGCAGAACCCTCACATGCACCTGCTTGAGGCCTGCCTCGC CCTGCACGCCGTTCAGCCCGATGGCGGGCACATGGCGCGCGCGCAGGAACTGATCGACCTGTTCGAAACCAAGCTGACCG CCGGCCCGAACGGACTGCTCGGTGAGCACTTTGCACCTGACTGGTCCCCGCTTCCCGGAGATCCGGGACGGATCGTGGAG CCGGGCCATCAGTTCGAGTGGGTCTGGCTGCTTCATGCCTATGCGCGCCAGGCCGGAGAGCCTGTCTCGCCCGCTGCCGA ACGTCTTTATACATTTGCCCTCACCACCCTTGATGTGGAGGGGCGCGCGATCCTGTCTGCCGCCCGCGGCGGCGCGCCGA TTGACGCCTCCCGCCGGGCATGGCCGCAGACTGAAGCTCTCAAGGCGCATCTGGCCATGCTTGAAGCCCGCCGGGATGAT CGCTACGCCGCCGCCGCCTGCCGCAGCTTCGATATACTCATGGATGAGCATCTGACCGAAGATGGTGGCTGGATCGACCA TATCGGCGCCGATGGCGCGGTCGTGTCAAACGCGATACCGGCCTCGACCGGCTATCATGTGGTGCTGGCCTTTGCCGAGC TTATCCGCGTGATGAACGCTTGA
Upstream 100 bases:
>100_bases CTGTCGGGCGCTGGCCAATCTGTCTGGCTCCTGTTAGCAGGTGCGGCCTCTTATTGGCGAGCGATTTGCAGCGGATAATC CGGGGGGAAGGCAAGGACTT
Downstream 100 bases:
>100_bases TATTCCCGAGATTTGCAGGGAATACAGCCGCGAAACCTGCCTGCCTGCAAGGGCTGGCCCTGAGATGAGGAATGCCATGA CCAAGCTCGCCCTGATCCGG
Product: N-acylglucosamine 2-epimerase
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MSVSALQRRAREARCWLLDSCFPLWADHGVNEAGLFPESLTTSLDEAPAEYTRVRVQARQTYVFSEAWRLGWKRDTAAKL VNAGVATLAGRALNAQGLAGRTLSTSSGHLVDVTSDLYDTAFVLFSLAEAARGPGPAEPAMAAAQGILMNLEKSARDAAQ GGYAETLPPPAHRQQNPHMHLLEACLALHAVQPDGGHMARAQELIDLFETKLTAGPNGLLGEHFAPDWSPLPGDPGRIVE PGHQFEWVWLLHAYARQAGEPVSPAAERLYTFALTTLDVEGRAILSAARGGAPIDASRRAWPQTEALKAHLAMLEARRDD RYAAAACRSFDILMDEHLTEDGGWIDHIGADGAVVSNAIPASTGYHVVLAFAELIRVMNA
Sequences:
>Translated_380_residues MSVSALQRRAREARCWLLDSCFPLWADHGVNEAGLFPESLTTSLDEAPAEYTRVRVQARQTYVFSEAWRLGWKRDTAAKL VNAGVATLAGRALNAQGLAGRTLSTSSGHLVDVTSDLYDTAFVLFSLAEAARGPGPAEPAMAAAQGILMNLEKSARDAAQ GGYAETLPPPAHRQQNPHMHLLEACLALHAVQPDGGHMARAQELIDLFETKLTAGPNGLLGEHFAPDWSPLPGDPGRIVE PGHQFEWVWLLHAYARQAGEPVSPAAERLYTFALTTLDVEGRAILSAARGGAPIDASRRAWPQTEALKAHLAMLEARRDD RYAAAACRSFDILMDEHLTEDGGWIDHIGADGAVVSNAIPASTGYHVVLAFAELIRVMNA >Mature_379_residues SVSALQRRAREARCWLLDSCFPLWADHGVNEAGLFPESLTTSLDEAPAEYTRVRVQARQTYVFSEAWRLGWKRDTAAKLV NAGVATLAGRALNAQGLAGRTLSTSSGHLVDVTSDLYDTAFVLFSLAEAARGPGPAEPAMAAAQGILMNLEKSARDAAQG GYAETLPPPAHRQQNPHMHLLEACLALHAVQPDGGHMARAQELIDLFETKLTAGPNGLLGEHFAPDWSPLPGDPGRIVEP GHQFEWVWLLHAYARQAGEPVSPAAERLYTFALTTLDVEGRAILSAARGGAPIDASRRAWPQTEALKAHLAMLEARRDDR YAAAACRSFDILMDEHLTEDGGWIDHIGADGAVVSNAIPASTGYHVVLAFAELIRVMNA
Specific function: Unknown
COG id: COG2942
COG function: function code G; N-acyl-D-glucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N-acylglucosamine 2-epimerase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR010819 [H]
Pfam domain/function: PF07221 GlcNAc_2-epim [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 40977; Mature: 40845
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSALQRRAREARCWLLDSCFPLWADHGVNEAGLFPESLTTSLDEAPAEYTRVRVQARQ CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH TYVFSEAWRLGWKRDTAAKLVNAGVATLAGRALNAQGLAGRTLSTSSGHLVDVTSDLYDT HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCEEEEHHHHHHH AFVLFSLAEAARGPGPAEPAMAAAQGILMNLEKSARDAAQGGYAETLPPPAHRQQNPHMH HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH LLEACLALHAVQPDGGHMARAQELIDLFETKLTAGPNGLLGEHFAPDWSPLPGDPGRIVE HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGHQFEWVWLLHAYARQAGEPVSPAAERLYTFALTTLDVEGRAILSAARGGAPIDASRRA CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEECCCCHHHHHHHCCCCCCCCCCCC WPQTEALKAHLAMLEARRDDRYAAAACRSFDILMDEHLTEDGGWIDHIGADGAVVSNAIP CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHCCCC ASTGYHVVLAFAELIRVMNA CCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SVSALQRRAREARCWLLDSCFPLWADHGVNEAGLFPESLTTSLDEAPAEYTRVRVQARQ CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH TYVFSEAWRLGWKRDTAAKLVNAGVATLAGRALNAQGLAGRTLSTSSGHLVDVTSDLYDT HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCEEEEHHHHHHH AFVLFSLAEAARGPGPAEPAMAAAQGILMNLEKSARDAAQGGYAETLPPPAHRQQNPHMH HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH LLEACLALHAVQPDGGHMARAQELIDLFETKLTAGPNGLLGEHFAPDWSPLPGDPGRIVE HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGHQFEWVWLLHAYARQAGEPVSPAAERLYTFALTTLDVEGRAILSAARGGAPIDASRRA CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEECCCCHHHHHHHCCCCCCCCCCCC WPQTEALKAHLAMLEARRDDRYAAAACRSFDILMDEHLTEDGGWIDHIGADGAVVSNAIP CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHCCCC ASTGYHVVLAFAELIRVMNA CCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1452036; 11481430 [H]