| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is yfeW [C]
Identifier: 114800070
GI number: 114800070
Start: 930139
End: 931308
Strand: Direct
Name: yfeW [C]
Synonym: HNE_0914
Alternate gene names: 114800070
Gene position: 930139-931308 (Clockwise)
Preceding gene: 114799039
Following gene: 114798678
Centisome position: 25.1
GC content: 69.15
Gene sequence:
>1170_bases ATGCGTATCCCCGCCGCCGCCGCGCGCCGCCGCATCGAAGACCTCGTCTATTCCGCCATGGTCCCCGCCGCCGGCCTGGT CGTGCGTCAGCGCGGCGAGGTCATCTTCGCGCAGGCGCAAGGCCTCGCCCAGGGCGCCGCGGGGGAAGCAGACCCCGCCC CCTTCACGCCAGACGCGCCGATGCGCATCGCTTCGGTTTCAAAGATGGCCGTCGCAATGACCGCCCACCGCCTCGCGGCC AAAGGCGCTTTGGATATCGACGCCGACATCCGCGCCGCCTTCAGCCCGCCCTTGATCAATCCCCATTTCCCCGACGCCCC GATCACCCTGCGCCAGCTCCTCAGCCACACCGCCGGCCTCGAAGACCCGGAGGTCTATTGGCAGCCCCTCCCGGGCCGCA CCGAAACCCTCTTTACCCAAACCATGTGGCGCACGCCGGACTGGGGCCCGCCCGGCGCGGGCTTCCGCTATGCCAATTTC GGCTACGGCCTCGCCGGCGCTATCCTTGAGCAGGCAACCGGCGACCGTCTCGACCGCCTCACCGCCCGCGAAGTGCTCGC CCCCTTGGGCCTCGACATAGGCTTCAACTGGTCCGGCGTCTCCAGCAGGAAGCGCCGCCACGGCGCCACACTCTACAGCC GCGAAGCAGAGGGTAGCTGGCAGGTGCAGGCCGATGGCCCCACCAATCTCACCGGCTCAGATCCCGCCATCCTCACCGAA GACGGCGCCCGCCTCGCCGACTATGTTCCGGGCACGAACGGCACCCTCTTCAGCCCCCAGGGCGGCCTGCGCGCGAGCCT CCACGATATGGCCATCCTCGCCCGCGCCGCTGCGCAAGACCCCGCGATGACCCGCCCCGTCTGGCGCTTCGATCCCGCCG GCCCCAATGGCGACGACGAACAGCTCTATTTTGAAACCTTCACCCCCGGCGCCCAGATTCACGAAGCGAATGCCTCACCC ATCCCCGGCGTCAAACTGATCGGCCATCACGGCGAAGCGTACGGGCTCTATTCCGGCGCCTTCCACGCCCCGACGCTCGA CGCCGAGATCGCCTTCGCCGTTACCGGAACCTCCGTGCCCGGTATGGAGCGCTCGCCCCATCATCCGGTCATCGTCAAGG CAACCGAGCCCCTCTGGGCCGCGGCGGAAACCCTGCTCGCCGCGCTCTAG
Upstream 100 bases:
>100_bases TCGGCCGCCGGGGATGACCGGGATGCGGCTCAGCCGGCGCAGCCTGATGGCAGGGGTCGCAGGCGCGGCCCTCACTGCCT GCGCTCACCGGGCAGACCCC
Downstream 100 bases:
>100_bases CCTTTTGTTTTCTTGGCCTTGCGCGGCTTTGCGGCCTTCTTGCCTGCCTCCTTCGCCTTGCGCATCCGGTCGCCGCCACC CATCGCCACCCACCAGAATA
Product: beta-lactamase
Products: NA
Alternate protein names: Amino Acid Adenylation; Amino Acid Adenylation Domain-Containing Protein; Alkaline D-Peptidase; FmtA-Like Protein
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MRIPAAAARRRIEDLVYSAMVPAAGLVVRQRGEVIFAQAQGLAQGAAGEADPAPFTPDAPMRIASVSKMAVAMTAHRLAA KGALDIDADIRAAFSPPLINPHFPDAPITLRQLLSHTAGLEDPEVYWQPLPGRTETLFTQTMWRTPDWGPPGAGFRYANF GYGLAGAILEQATGDRLDRLTAREVLAPLGLDIGFNWSGVSSRKRRHGATLYSREAEGSWQVQADGPTNLTGSDPAILTE DGARLADYVPGTNGTLFSPQGGLRASLHDMAILARAAAQDPAMTRPVWRFDPAGPNGDDEQLYFETFTPGAQIHEANASP IPGVKLIGHHGEAYGLYSGAFHAPTLDAEIAFAVTGTSVPGMERSPHHPVIVKATEPLWAAAETLLAAL
Sequences:
>Translated_389_residues MRIPAAAARRRIEDLVYSAMVPAAGLVVRQRGEVIFAQAQGLAQGAAGEADPAPFTPDAPMRIASVSKMAVAMTAHRLAA KGALDIDADIRAAFSPPLINPHFPDAPITLRQLLSHTAGLEDPEVYWQPLPGRTETLFTQTMWRTPDWGPPGAGFRYANF GYGLAGAILEQATGDRLDRLTAREVLAPLGLDIGFNWSGVSSRKRRHGATLYSREAEGSWQVQADGPTNLTGSDPAILTE DGARLADYVPGTNGTLFSPQGGLRASLHDMAILARAAAQDPAMTRPVWRFDPAGPNGDDEQLYFETFTPGAQIHEANASP IPGVKLIGHHGEAYGLYSGAFHAPTLDAEIAFAVTGTSVPGMERSPHHPVIVKATEPLWAAAETLLAAL >Mature_389_residues MRIPAAAARRRIEDLVYSAMVPAAGLVVRQRGEVIFAQAQGLAQGAAGEADPAPFTPDAPMRIASVSKMAVAMTAHRLAA KGALDIDADIRAAFSPPLINPHFPDAPITLRQLLSHTAGLEDPEVYWQPLPGRTETLFTQTMWRTPDWGPPGAGFRYANF GYGLAGAILEQATGDRLDRLTAREVLAPLGLDIGFNWSGVSSRKRRHGATLYSREAEGSWQVQADGPTNLTGSDPAILTE DGARLADYVPGTNGTLFSPQGGLRASLHDMAILARAAAQDPAMTRPVWRFDPAGPNGDDEQLYFETFTPGAQIHEANASP IPGVKLIGHHGEAYGLYSGAFHAPTLDAEIAFAVTGTSVPGMERSPHHPVIVKATEPLWAAAETLLAAL
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI115533026, Length=213, Percent_Identity=30.0469483568075, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17550934, Length=193, Percent_Identity=27.4611398963731, Blast_Score=71, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41387; Mature: 41387
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIPAAAARRRIEDLVYSAMVPAAGLVVRQRGEVIFAQAQGLAQGAAGEADPAPFTPDAP CCCCHHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEEECCCHHCCCCCCCCCCCCCCCCC MRIASVSKMAVAMTAHRLAAKGALDIDADIRAAFSPPLINPHFPDAPITLRQLLSHTAGL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCC EDPEVYWQPLPGRTETLFTQTMWRTPDWGPPGAGFRYANFGYGLAGAILEQATGDRLDRL CCCHHEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCHHHHHH TAREVLAPLGLDIGFNWSGVSSRKRRHGATLYSREAEGSWQVQADGPTNLTGSDPAILTE HHHHHHHHCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCEEEEECCCCCCCCCCCEEEEC DGARLADYVPGTNGTLFSPQGGLRASLHDMAILARAAAQDPAMTRPVWRFDPAGPNGDDE CCCCHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCC QLYFETFTPGAQIHEANASPIPGVKLIGHHGEAYGLYSGAFHAPTLDAEIAFAVTGTSVP EEEEEECCCCCEEEECCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCEEEEEEECCCCC GMERSPHHPVIVKATEPLWAAAETLLAAL CCCCCCCCCEEEEECCCHHHHHHHHHHCC >Mature Secondary Structure MRIPAAAARRRIEDLVYSAMVPAAGLVVRQRGEVIFAQAQGLAQGAAGEADPAPFTPDAP CCCCHHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEEECCCHHCCCCCCCCCCCCCCCCC MRIASVSKMAVAMTAHRLAAKGALDIDADIRAAFSPPLINPHFPDAPITLRQLLSHTAGL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCC EDPEVYWQPLPGRTETLFTQTMWRTPDWGPPGAGFRYANFGYGLAGAILEQATGDRLDRL CCCHHEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCHHHHHH TAREVLAPLGLDIGFNWSGVSSRKRRHGATLYSREAEGSWQVQADGPTNLTGSDPAILTE HHHHHHHHCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCEEEEECCCCCCCCCCCEEEEC DGARLADYVPGTNGTLFSPQGGLRASLHDMAILARAAAQDPAMTRPVWRFDPAGPNGDDE CCCCHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCC QLYFETFTPGAQIHEANASPIPGVKLIGHHGEAYGLYSGAFHAPTLDAEIAFAVTGTSVP EEEEEECCCCCEEEECCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCEEEEEEECCCCC GMERSPHHPVIVKATEPLWAAAETLLAAL CCCCCCCCCEEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA