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The map label for this gene is cadC [C]

Identifier: 114799947

GI number: 114799947

Start: 2717450

End: 2719018

Strand: Direct

Name: cadC [C]

Synonym: HNE_2565

Alternate gene names: 114799947

Gene position: 2717450-2719018 (Clockwise)

Preceding gene: 114798904

Following gene: 114799163

Centisome position: 73.35

GC content: 62.59

Gene sequence:

>1569_bases
ATGATGACCTCAGACCCGTCCGAACACCTCCCCCGTATTGACCTGGCCAGTATGCCGAGGTGCCGGATTGGCGCGCTGAC
CCTTGCGCCGCCGCTTCGGGAAGTCAGCGGACCGGACTGGACAGAGGTTCTCGAGCCCCGCGTGATGCAGGTTCTGATCG
CGCTGGCGTCCCCCTCCGCAGAAGTGGTCACAAGAGACGAGCTGATCGCGCGTTGTTGGAATGGCCTCGCCGTCAGTGAG
GACGCGATCCAGCGCTGCATCGGCAGGCTTCGGCGCCTCGCGCGGGATCGGGGCAGCTTTGAGATCGTCACCGTCCCGCG
GGTCGGGTACAGGCTGCTGCCGGACGCGGCCCCAATGCCGCGGGAAACCTCAGACCGGCTCAAGGGTCATACGCGCAGCC
CGGCTCCGCAGCTGCTGGTCGATGTTGAGCCTTTCTCAAATCTCACCCCGGATGAAACCGTCTCGCGCTTTGCCACTCTG
CTGTTCGATGACATCGTGATCGCCTTGACCCTGCACAGGGATTTTGTCGTTCGCCTCGCAGGCCCGGCGCAGACGGATGC
TTATCGGCTGACAGGAAATCTCCGGCCGGATGGAAACCACATTCAGGTTTCCCTGCGCATCGTGAATTCAGACGGCGCCG
TCATCCTGGCGCGCAGATTTGAAGCGGATTGGAACGGGGAGGCGCCGCCCTCCGACGATTTTGTCCTTCAGGTTTCCGGC
GCCCTCAGCAGCGAAATCCTCCGTGCTGAGACCGACCGTGCCTTGCGTAAATCAGCCGACCTCACCGCCTGGGAAGCGGT
CGTGAGGTCTGTCTCTGCCTATTCCAGCATCAGCGTCGGCAATCTCGACTTCGCGATCTCCGAAGCCCGGCGCGGCCTTG
AAATCGATCCCGCCTACGCAGAGGCCCATGCTGCGCTCGCTAATGCGCTGGCCGGAAAATTCGAAGTGGGCGGCGGGCTC
GATCAGGCACTCGCCGAACAGGCTGCCCGTGAAATAGATCTGGCCCTTACGCTCGGCCGCGACCGGCCAGATGTTCTGGC
CCGCGCCGCAACGGCGCTCTCCATGATCGGCCGCCCTGCTGAAGCATTGCCGTATGCGGAAGATGCTGTCGCGATGAACC
CCGGTGGCGGTATCGGCCATCTCTATCTCGGCCGCGTGCTCATGCGCAACGGCGAGCCAGAGAAAGCCATCTTTCACCTG
TCCCGGTTTGAACAGCTTTCACCCAGCTCCCCGCTCCGGTACTTTTCCACATTCCAGAAAAGCGTTGCCCTATTCATGCA
GGGTGATCTGAAGGGCGCCGAAACAGCACTCGAAAGCACAATCCGGCTCAACCCCAGCTATCCGTTTGCCTGGTTGTCAA
AAGCGGTATTGATGAGCCTTCAGGGACGCTCGGATGAGGCCATCGCCGCCGCAGAGCGCCTGATCGGAATTGAAGGCCCC
GATGCCCTCCCCCTTCACCTCGCGCGCATACGCGTTGGCTATCCCGGCGGAGGCGATGCAAATCTCCTCACCTCTGCTTT
TGAACTCGCCTGGGCGTCGGCGCTCGCGCCAAGGTCCGCAAACCACTGA

Upstream 100 bases:

>100_bases
CCGCTGCCCGAGAATTCGGGATCAGCGACGCACCAAGGAATGCGCCACCTTGGAATCTGGCGACAGGACCACAGCCCGAT
GATCTGCCGATGGTTTCCCG

Downstream 100 bases:

>100_bases
GGCGCAGCGGAGTGTTCAAGCCCCCGCACTCTCCCGCGCGCTCACCCGCTCATGCCACGCCTTCACATGCCCCGCCCCGT
CCGGCACCGGCAGCCCAATC

Product: TPR domain-containing protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator Domain-Containing Protein; Transcriptional Regulator Domain Protein; Regulatory Protein; Transcriptional Regulatory Protein-Like; Transcriptional Regulator CadC; Lysine Decarboxylase Transcriptional Regulator CadC; CadC Family Transcriptional Regulator; Transcriptional Regulator Cadc; Two-Component Response Regulator Protein; Transcriptional Regulator CadC-Family; TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 522; Mature: 522

Protein sequence:

>522_residues
MMTSDPSEHLPRIDLASMPRCRIGALTLAPPLREVSGPDWTEVLEPRVMQVLIALASPSAEVVTRDELIARCWNGLAVSE
DAIQRCIGRLRRLARDRGSFEIVTVPRVGYRLLPDAAPMPRETSDRLKGHTRSPAPQLLVDVEPFSNLTPDETVSRFATL
LFDDIVIALTLHRDFVVRLAGPAQTDAYRLTGNLRPDGNHIQVSLRIVNSDGAVILARRFEADWNGEAPPSDDFVLQVSG
ALSSEILRAETDRALRKSADLTAWEAVVRSVSAYSSISVGNLDFAISEARRGLEIDPAYAEAHAALANALAGKFEVGGGL
DQALAEQAAREIDLALTLGRDRPDVLARAATALSMIGRPAEALPYAEDAVAMNPGGGIGHLYLGRVLMRNGEPEKAIFHL
SRFEQLSPSSPLRYFSTFQKSVALFMQGDLKGAETALESTIRLNPSYPFAWLSKAVLMSLQGRSDEAIAAAERLIGIEGP
DALPLHLARIRVGYPGGGDANLLTSAFELAWASALAPRSANH

Sequences:

>Translated_522_residues
MMTSDPSEHLPRIDLASMPRCRIGALTLAPPLREVSGPDWTEVLEPRVMQVLIALASPSAEVVTRDELIARCWNGLAVSE
DAIQRCIGRLRRLARDRGSFEIVTVPRVGYRLLPDAAPMPRETSDRLKGHTRSPAPQLLVDVEPFSNLTPDETVSRFATL
LFDDIVIALTLHRDFVVRLAGPAQTDAYRLTGNLRPDGNHIQVSLRIVNSDGAVILARRFEADWNGEAPPSDDFVLQVSG
ALSSEILRAETDRALRKSADLTAWEAVVRSVSAYSSISVGNLDFAISEARRGLEIDPAYAEAHAALANALAGKFEVGGGL
DQALAEQAAREIDLALTLGRDRPDVLARAATALSMIGRPAEALPYAEDAVAMNPGGGIGHLYLGRVLMRNGEPEKAIFHL
SRFEQLSPSSPLRYFSTFQKSVALFMQGDLKGAETALESTIRLNPSYPFAWLSKAVLMSLQGRSDEAIAAAERLIGIEGP
DALPLHLARIRVGYPGGGDANLLTSAFELAWASALAPRSANH
>Mature_522_residues
MMTSDPSEHLPRIDLASMPRCRIGALTLAPPLREVSGPDWTEVLEPRVMQVLIALASPSAEVVTRDELIARCWNGLAVSE
DAIQRCIGRLRRLARDRGSFEIVTVPRVGYRLLPDAAPMPRETSDRLKGHTRSPAPQLLVDVEPFSNLTPDETVSRFATL
LFDDIVIALTLHRDFVVRLAGPAQTDAYRLTGNLRPDGNHIQVSLRIVNSDGAVILARRFEADWNGEAPPSDDFVLQVSG
ALSSEILRAETDRALRKSADLTAWEAVVRSVSAYSSISVGNLDFAISEARRGLEIDPAYAEAHAALANALAGKFEVGGGL
DQALAEQAAREIDLALTLGRDRPDVLARAATALSMIGRPAEALPYAEDAVAMNPGGGIGHLYLGRVLMRNGEPEKAIFHL
SRFEQLSPSSPLRYFSTFQKSVALFMQGDLKGAETALESTIRLNPSYPFAWLSKAVLMSLQGRSDEAIAAAERLIGIEGP
DALPLHLARIRVGYPGGGDANLLTSAFELAWASALAPRSANH

Specific function: Required For Pcad Induction, A Promoter Upstream Of Cadb That Is Responsible For The Ph-Regulated Expression Of Cada. [C]

COG id: COG3710

COG function: function code K; DNA-binding winged-HTH domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56454; Mature: 56454

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTSDPSEHLPRIDLASMPRCRIGALTLAPPLREVSGPDWTEVLEPRVMQVLIALASPSA
CCCCCCHHHCCCCCCCCCCCCCCCEEECCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCH
EVVTRDELIARCWNGLAVSEDAIQRCIGRLRRLARDRGSFEIVTVPRVGYRLLPDAAPMP
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCCC
RETSDRLKGHTRSPAPQLLVDVEPFSNLTPDETVSRFATLLFDDIVIALTLHRDFVVRLA
CCCHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCEEEEEC
GPAQTDAYRLTGNLRPDGNHIQVSLRIVNSDGAVILARRFEADWNGEAPPSDDFVLQVSG
CCCCCCCEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEECC
ALSSEILRAETDRALRKSADLTAWEAVVRSVSAYSSISVGNLDFAISEARRGLEIDPAYA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHH
EAHAALANALAGKFEVGGGLDQALAEQAAREIDLALTLGRDRPDVLARAATALSMIGRPA
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHCCCH
EALPYAEDAVAMNPGGGIGHLYLGRVLMRNGEPEKAIFHLSRFEQLSPSSPLRYFSTFQK
HHCCCCCCCEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
SVALFMQGDLKGAETALESTIRLNPSYPFAWLSKAVLMSLQGRSDEAIAAAERLIGIEGP
HHHHHHCCCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
DALPLHLARIRVGYPGGGDANLLTSAFELAWASALAPRSANH
CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MMTSDPSEHLPRIDLASMPRCRIGALTLAPPLREVSGPDWTEVLEPRVMQVLIALASPSA
CCCCCCHHHCCCCCCCCCCCCCCCEEECCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCH
EVVTRDELIARCWNGLAVSEDAIQRCIGRLRRLARDRGSFEIVTVPRVGYRLLPDAAPMP
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCCC
RETSDRLKGHTRSPAPQLLVDVEPFSNLTPDETVSRFATLLFDDIVIALTLHRDFVVRLA
CCCHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCEEEEEC
GPAQTDAYRLTGNLRPDGNHIQVSLRIVNSDGAVILARRFEADWNGEAPPSDDFVLQVSG
CCCCCCCEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEECC
ALSSEILRAETDRALRKSADLTAWEAVVRSVSAYSSISVGNLDFAISEARRGLEIDPAYA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHH
EAHAALANALAGKFEVGGGLDQALAEQAAREIDLALTLGRDRPDVLARAATALSMIGRPA
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHCCCH
EALPYAEDAVAMNPGGGIGHLYLGRVLMRNGEPEKAIFHLSRFEQLSPSSPLRYFSTFQK
HHCCCCCCCEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
SVALFMQGDLKGAETALESTIRLNPSYPFAWLSKAVLMSLQGRSDEAIAAAERLIGIEGP
HHHHHHCCCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
DALPLHLARIRVGYPGGGDANLLTSAFELAWASALAPRSANH
CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA