| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799945
Identifier: 114799945
GI number: 114799945
Start: 1036224
End: 1036640
Strand: Direct
Name: 114799945
Synonym: HNE_1026
Alternate gene names: NA
Gene position: 1036224-1036640 (Clockwise)
Preceding gene: 114800465
Following gene: 114797154
Centisome position: 27.97
GC content: 62.11
Gene sequence:
>417_bases ATGGCTAAAACCACCAAAACTGCTCCTCGCGCGAAGGCTGAAGCCCGTCCGACCGAGGCCGCTACCAAGACCATCGAGTC TGGCATGGACACCATGGCGGGCATCGCCTCGAAATTTTCCGGTTACACCGAAGACGGCGTGAAAGCGCTGAAAGACAGCG CTGCGCTCTCCACCGAGACGATGCGCGAAATCGGCAGCCGCAACATGAACTTCATGACCCAGGCCATGGAACAGGGCGTT GAGCTGACCCAGGCGCTGGCTTCGGCCCGCGACCCCCGCGAAATGTTCCAGATCCAGTCGGGCTACGCCAAGTCGATGTT CTCGGCCTACACCGCCGAGTTCACCGCCCAGTCCGAGCTCTGCATGGGCGCCTGGCGCGAAGCGGCCAAGCCGTTCATGT CGCGCTTCGCGAAGTAA
Upstream 100 bases:
>100_bases GCAAAATGATTAATGTTGCGGCGCACAATAAATATTGCGACCGCGAAGGGAATGTGCTATTTTAGGGGAAATCGAAATCC CGTACAAAAAGGATGTTCCC
Downstream 100 bases:
>100_bases GTTTCAAACCTCTGGGTTTCGGGCTCCGGCGTTCCTCCCCGCCTCCGGACGTAGAGTGAAAGTGTAGATTTTAGAGGCCG GGCCGGTTGGTCCGGCCTCT
Product: phasin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MAKTTKTAPRAKAEARPTEAATKTIESGMDTMAGIASKFSGYTEDGVKALKDSAALSTETMREIGSRNMNFMTQAMEQGV ELTQALASARDPREMFQIQSGYAKSMFSAYTAEFTAQSELCMGAWREAAKPFMSRFAK
Sequences:
>Translated_138_residues MAKTTKTAPRAKAEARPTEAATKTIESGMDTMAGIASKFSGYTEDGVKALKDSAALSTETMREIGSRNMNFMTQAMEQGV ELTQALASARDPREMFQIQSGYAKSMFSAYTAEFTAQSELCMGAWREAAKPFMSRFAK >Mature_137_residues AKTTKTAPRAKAEARPTEAATKTIESGMDTMAGIASKFSGYTEDGVKALKDSAALSTETMREIGSRNMNFMTQAMEQGVE LTQALASARDPREMFQIQSGYAKSMFSAYTAEFTAQSELCMGAWREAAKPFMSRFAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15036; Mature: 14905
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 8.0 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 7.3 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTTKTAPRAKAEARPTEAATKTIESGMDTMAGIASKFSGYTEDGVKALKDSAALSTET CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH MREIGSRNMNFMTQAMEQGVELTQALASARDPREMFQIQSGYAKSMFSAYTAEFTAQSEL HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CMGAWREAAKPFMSRFAK HHHHHHHHHHHHHHHHCC >Mature Secondary Structure AKTTKTAPRAKAEARPTEAATKTIESGMDTMAGIASKFSGYTEDGVKALKDSAALSTET CCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH MREIGSRNMNFMTQAMEQGVELTQALASARDPREMFQIQSGYAKSMFSAYTAEFTAQSEL HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CMGAWREAAKPFMSRFAK HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA