| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114797154
Identifier: 114797154
GI number: 114797154
Start: 1036874
End: 1038190
Strand: Direct
Name: 114797154
Synonym: HNE_1027
Alternate gene names: NA
Gene position: 1036874-1038190 (Clockwise)
Preceding gene: 114799945
Following gene: 114797951
Centisome position: 27.99
GC content: 67.5
Gene sequence:
>1317_bases ATGATACAGGATCGTCAGGGTAATCCGCTGGCGGGCGCCAGCCCGAAGGCGGCGGAGCTGTTTGATCTCTCGTGCCGGCG CTTTGCCCGCTTCCGGGGCGATCCGGTCGAGCCGCTGGACGAAGCCATCGCTGACTCGCCCGACTTCGGCATGGCGAAGA TTGCCAAGGCCTGGCTCTATGTCACCTCGACCGAGCCTGGTGCGACGGCCGGCGCGCGGCGCCTGCTGCGCGACATCGAG AAGGAAACCCCGCCCGGCACGGAGCGCGAGATCGCCCATGTGAAGGGGTTGCAGGCCGCCACGCTGGGCAACTGGACTGA AGCCGGCCGCACGCTGGATCTCTGGTCGGCCTCCCATCCGCGCGATTATCTCGCCCTCCTCATCGGCCATCAGATCGACT TTCTCACCGCCAATGCCCGAAACCTGCGCGACCGGATCGCCAGGGCCTTGCCCGCCTGGGACAAGCTGCCCGAGCGGTCA TTTCTCCTCGGCATGCTCGCCTTCGGCCTTGAGGAGGCGGGCGACTATCCCCGCGCCGAGGCCGCAGGCCGCGAGGCGCT GGAGCGCGAGCCGACCGACAGCTGGGCCCACCATGCCGTGGTGCATGTGCTGGAAATGCAGGGCCGCGCCGAAGAGGGCC GCGATTTCATCCGCCGCCGCCGCGAACACTGGGCCCAGCCCGACAGCTTCCTGAAAATCCACAACTGGTGGCATCTGGCG CTCTGCCATCTGGAACTGGGCGAGTTCGAGGCCGCGCTGCAACTCTATGACGATGAAATTCGGGCCGGCGAAAGCGGCAT CGCGATGAACCTCGCCGACGCCGCCGCGCTGCTCTGGCGGCTGCATGTCATCGGCGTTGACCTCGGCGAGCGCTGGGAGG AACTGGCCGACGCCTGGACCCAGCATGCCGATGGCCGCTGCTATCCCTTCAACGACATGCACGCCGCCATGGCCTTCATT GGCGCAGGCCGCCGCAATGACGCGCTGGACCTGCTGGTCGCCGCCGAAGGCGCTGATCCCGGCGAGATGCGCGACTGGAT GGCCCATACCGGACGCCCGGTCATCGAAGGGCTGGTTGCGTTCGGGAAGGGCAAATATGCCGATGCCGCCGAGCTGCTTT TTCCTGCGCGCCAGATTTATGCCAGCTTTGGCGGTAGCCATGCGCAGCGCGACGTGATCGACTGGACACTGACAGAAGCG GCCATTCGCGGCCGCCTGCACGGGCTGGCCGATTCGCTGATTGCCGAGCGCTTGTCGCTGCGTCCCGGCAGCCGCGTGAA CCGGGCCTTTGCCGCGCGCGCCCGGCGCGAGCATTGA
Upstream 100 bases:
>100_bases CTGACGCTGCGTCCACTGTCGCAGAAACGTCAAACCGGGTTCGCCCCCGCCGCGAACCGATCTATGATCGGTCCAGATCG GCCTCGTGGGGGAAGTCGCA
Downstream 100 bases:
>100_bases TGTGGCGGGTTTTTAAGCAGGAGGCGACAACGCCGTGACGGACTTTCTCGACTTTCAGACCCTGAAGCGCCCGCCCAAGC CGAACACGGCCCTGATTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MIQDRQGNPLAGASPKAAELFDLSCRRFARFRGDPVEPLDEAIADSPDFGMAKIAKAWLYVTSTEPGATAGARRLLRDIE KETPPGTEREIAHVKGLQAATLGNWTEAGRTLDLWSASHPRDYLALLIGHQIDFLTANARNLRDRIARALPAWDKLPERS FLLGMLAFGLEEAGDYPRAEAAGREALEREPTDSWAHHAVVHVLEMQGRAEEGRDFIRRRREHWAQPDSFLKIHNWWHLA LCHLELGEFEAALQLYDDEIRAGESGIAMNLADAAALLWRLHVIGVDLGERWEELADAWTQHADGRCYPFNDMHAAMAFI GAGRRNDALDLLVAAEGADPGEMRDWMAHTGRPVIEGLVAFGKGKYADAAELLFPARQIYASFGGSHAQRDVIDWTLTEA AIRGRLHGLADSLIAERLSLRPGSRVNRAFAARARREH
Sequences:
>Translated_438_residues MIQDRQGNPLAGASPKAAELFDLSCRRFARFRGDPVEPLDEAIADSPDFGMAKIAKAWLYVTSTEPGATAGARRLLRDIE KETPPGTEREIAHVKGLQAATLGNWTEAGRTLDLWSASHPRDYLALLIGHQIDFLTANARNLRDRIARALPAWDKLPERS FLLGMLAFGLEEAGDYPRAEAAGREALEREPTDSWAHHAVVHVLEMQGRAEEGRDFIRRRREHWAQPDSFLKIHNWWHLA LCHLELGEFEAALQLYDDEIRAGESGIAMNLADAAALLWRLHVIGVDLGERWEELADAWTQHADGRCYPFNDMHAAMAFI GAGRRNDALDLLVAAEGADPGEMRDWMAHTGRPVIEGLVAFGKGKYADAAELLFPARQIYASFGGSHAQRDVIDWTLTEA AIRGRLHGLADSLIAERLSLRPGSRVNRAFAARARREH >Mature_438_residues MIQDRQGNPLAGASPKAAELFDLSCRRFARFRGDPVEPLDEAIADSPDFGMAKIAKAWLYVTSTEPGATAGARRLLRDIE KETPPGTEREIAHVKGLQAATLGNWTEAGRTLDLWSASHPRDYLALLIGHQIDFLTANARNLRDRIARALPAWDKLPERS FLLGMLAFGLEEAGDYPRAEAAGREALEREPTDSWAHHAVVHVLEMQGRAEEGRDFIRRRREHWAQPDSFLKIHNWWHLA LCHLELGEFEAALQLYDDEIRAGESGIAMNLADAAALLWRLHVIGVDLGERWEELADAWTQHADGRCYPFNDMHAAMAFI GAGRRNDALDLLVAAEGADPGEMRDWMAHTGRPVIEGLVAFGKGKYADAAELLFPARQIYASFGGSHAQRDVIDWTLTEA AIRGRLHGLADSLIAERLSLRPGSRVNRAFAARARREH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI116812608, Length=450, Percent_Identity=31.7777777777778, Blast_Score=205, Evalue=5e-53, Organism=Caenorhabditis elegans, GI32564653, Length=453, Percent_Identity=30.242825607064, Blast_Score=185, Evalue=5e-47, Organism=Caenorhabditis elegans, GI17537551, Length=364, Percent_Identity=32.4175824175824, Blast_Score=166, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48759; Mature: 48759
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQDRQGNPLAGASPKAAELFDLSCRRFARFRGDPVEPLDEAIADSPDFGMAKIAKAWLY CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHEE VTSTEPGATAGARRLLRDIEKETPPGTEREIAHVKGLQAATLGNWTEAGRTLDLWSASHP EECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHCCCHHHCCCEEEECCCCCC RDYLALLIGHQIDFLTANARNLRDRIARALPAWDKLPERSFLLGMLAFGLEEAGDYPRAE HHHHHHHHHCCCEEEECCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCCCCCCHH AAGREALEREPTDSWAHHAVVHVLEMQGRAEEGRDFIRRRREHWAQPDSFLKIHNWWHLA HHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEHHCCEEEH LCHLELGEFEAALQLYDDEIRAGESGIAMNLADAAALLWRLHVIGVDLGERWEELADAWT HHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH QHADGRCYPFNDMHAAMAFIGAGRRNDALDLLVAAEGADPGEMRDWMAHTGRPVIEGLVA HCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHH FGKGKYADAAELLFPARQIYASFGGSHAQRDVIDWTLTEAAIRGRLHGLADSLIAERLSL HCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RPGSRVNRAFAARARREH CCCCHHHHHHHHHHHCCC >Mature Secondary Structure MIQDRQGNPLAGASPKAAELFDLSCRRFARFRGDPVEPLDEAIADSPDFGMAKIAKAWLY CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHEE VTSTEPGATAGARRLLRDIEKETPPGTEREIAHVKGLQAATLGNWTEAGRTLDLWSASHP EECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHCCCHHHCCCEEEECCCCCC RDYLALLIGHQIDFLTANARNLRDRIARALPAWDKLPERSFLLGMLAFGLEEAGDYPRAE HHHHHHHHHCCCEEEECCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCCCCCCHH AAGREALEREPTDSWAHHAVVHVLEMQGRAEEGRDFIRRRREHWAQPDSFLKIHNWWHLA HHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEHHCCEEEH LCHLELGEFEAALQLYDDEIRAGESGIAMNLADAAALLWRLHVIGVDLGERWEELADAWT HHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH QHADGRCYPFNDMHAAMAFIGAGRRNDALDLLVAAEGADPGEMRDWMAHTGRPVIEGLVA HCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHH FGKGKYADAAELLFPARQIYASFGGSHAQRDVIDWTLTEAAIRGRLHGLADSLIAERLSL HCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RPGSRVNRAFAARARREH CCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA