| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is ectB [H]
Identifier: 114799897
GI number: 114799897
Start: 1676795
End: 1678090
Strand: Direct
Name: ectB [H]
Synonym: HNE_1640
Alternate gene names: 114799897
Gene position: 1676795-1678090 (Clockwise)
Preceding gene: 114797806
Following gene: 114799353
Centisome position: 45.26
GC content: 60.34
Gene sequence:
>1296_bases ATGGCCTACGAACACGCATCTGCACCCGCAAATATTTTTGAGCGCCGCGAATCCCGTGTGCGCAGCTATTGCCGGTCTTT CCCGGCGGTCTTCAAATCCGCACGCGGATCAGAGTTGATCGCTGAAGACGGCACACGCTACATCGACTTTCTGTCCGGCT GTTCCACGCTGAACTACGGCCACAACCATCCCGAGCTGAAACAGGCCCTCCTGGACTATATCGGCGCGGACGGCGTGGCG CACGGCCTCGATATGCACACGCGTGCAAAGGCCCGTTTTCTGAACACTTTCGAGCGGCTTATCCTCAAGCCACGCAGCAT GGATCACCGCGTCCTCTTTCCGGGGCCAACAGGTGCCAACGCTGTAGAGGCTGCTCTGAAGACCGCCCGTAAAGTCACGG GGCGGACAAATGTAATTGCCTTCACCAACGGCTTCCATGGCATGACGCTTGGCGCCCTCGCTGCGACGGGCAATTCCGGC AAGCGCGGCGGGGCAGGTGTGCCGCTCACGGGCGTGACGCATGAAGCCTTTGATGGCTATTTCGGTGAGGATACCGACAC GGCTGACCAGCTGGATCGCCGCCTGTCTGACCCCTCTTCGGGGCTCGACAAACCGGCTGCCATCATTGTGGAAACCGTGC AGGGCGAAGGCGGATTGAATGTCGCGTCTGATGCCTGGCTGCGCAAGATCGAGAAGATCGCCCGCAAGCATGGCGCCCTC TTCATTATTGATGACATCCAGGCGGGCATTGGCCGCACAGGTGGCTTCTTCAGCTTCGAAAAAGCAGGTGTTACGCCGGA TATTATCACGATGGCCAAGTCCCTCTCGGGCCTGGGTCTGCCCTTCGCGCTGACATTGATCCGCCCACAGCATGATCTTT GGAAGCCCGGTGAGCACAACGGCACGTTCCGTGGCAACAACCATGCCTTCGTGACGGCAACCAAGGCGCTGGAACTGTTC TGGGCCGATGATGCCTTCGAGAAGGAAACCGCTCGCAAGGCCGCGCGTCTTCGCGCCGGCTTGGAAAAGATCGCTGCTTC CGCATCGTTCGCTGGCCGGCTGAAAGGCAAGGGCATGATGTCCGGCATCGAGATGGAAAGCGGAGACGTGGCGGCCGAGA TTTGCACCGAATGCTTCCAGAACGGCCTCATTATCGAAACCAGCGGCAGCATGGATGAAGTCGTCAAGGTGCTCGCCCCG CTCACCATCACCGATGCCGAATTGGATGCCGGCCTCAAAATTCTTGCGGACGCCGTGCGCGCGGTCAGCGCGCGCCGCCA GAAGTCCGCAGCCTGA
Upstream 100 bases:
>100_bases CACCGAATTCCTCGTGACCATTGGCCCTTTCGAGGCGCCAGCGGCTTCTGGCTGACCCCTTCAGCCGACTGTAGAAATCA GAGCAAAAAAGGAGCCATAA
Downstream 100 bases:
>100_bases AGGAGATAAAAATGATTGTTAGAGACCTCGCAAAAGAAATCCTTACAGACCGCCGCGTGGACAGCGACGGCTGGTCTTCC GTTCGCCTGCTGCTGAAAGA
Product: diaminobutyrate--2-oxoglutarate aminotransferase
Products: NA
Alternate protein names: DABA aminotransferase; Diaminobutyrate--2-oxoglutarate aminotransferase; L-2,4-diaminobutyric acid transaminase [H]
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MAYEHASAPANIFERRESRVRSYCRSFPAVFKSARGSELIAEDGTRYIDFLSGCSTLNYGHNHPELKQALLDYIGADGVA HGLDMHTRAKARFLNTFERLILKPRSMDHRVLFPGPTGANAVEAALKTARKVTGRTNVIAFTNGFHGMTLGALAATGNSG KRGGAGVPLTGVTHEAFDGYFGEDTDTADQLDRRLSDPSSGLDKPAAIIVETVQGEGGLNVASDAWLRKIEKIARKHGAL FIIDDIQAGIGRTGGFFSFEKAGVTPDIITMAKSLSGLGLPFALTLIRPQHDLWKPGEHNGTFRGNNHAFVTATKALELF WADDAFEKETARKAARLRAGLEKIAASASFAGRLKGKGMMSGIEMESGDVAAEICTECFQNGLIIETSGSMDEVVKVLAP LTITDAELDAGLKILADAVRAVSARRQKSAA
Sequences:
>Translated_431_residues MAYEHASAPANIFERRESRVRSYCRSFPAVFKSARGSELIAEDGTRYIDFLSGCSTLNYGHNHPELKQALLDYIGADGVA HGLDMHTRAKARFLNTFERLILKPRSMDHRVLFPGPTGANAVEAALKTARKVTGRTNVIAFTNGFHGMTLGALAATGNSG KRGGAGVPLTGVTHEAFDGYFGEDTDTADQLDRRLSDPSSGLDKPAAIIVETVQGEGGLNVASDAWLRKIEKIARKHGAL FIIDDIQAGIGRTGGFFSFEKAGVTPDIITMAKSLSGLGLPFALTLIRPQHDLWKPGEHNGTFRGNNHAFVTATKALELF WADDAFEKETARKAARLRAGLEKIAASASFAGRLKGKGMMSGIEMESGDVAAEICTECFQNGLIIETSGSMDEVVKVLAP LTITDAELDAGLKILADAVRAVSARRQKSAA >Mature_430_residues AYEHASAPANIFERRESRVRSYCRSFPAVFKSARGSELIAEDGTRYIDFLSGCSTLNYGHNHPELKQALLDYIGADGVAH GLDMHTRAKARFLNTFERLILKPRSMDHRVLFPGPTGANAVEAALKTARKVTGRTNVIAFTNGFHGMTLGALAATGNSGK RGGAGVPLTGVTHEAFDGYFGEDTDTADQLDRRLSDPSSGLDKPAAIIVETVQGEGGLNVASDAWLRKIEKIARKHGALF IIDDIQAGIGRTGGFFSFEKAGVTPDIITMAKSLSGLGLPFALTLIRPQHDLWKPGEHNGTFRGNNHAFVTATKALELFW ADDAFEKETARKAARLRAGLEKIAASASFAGRLKGKGMMSGIEMESGDVAAEICTECFQNGLIIETSGSMDEVVKVLAPL TITDAELDAGLKILADAVRAVSARRQKSAA
Specific function: Catalyzes reversively the conversion of L-aspartate beta-semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate [H]
COG id: COG0160
COG function: function code E; 4-aminobutyrate aminotransferase and related aminotransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557809, Length=421, Percent_Identity=29.6912114014252, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI13994255, Length=443, Percent_Identity=25.2821670428894, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI284507298, Length=314, Percent_Identity=29.6178343949045, Blast_Score=109, Evalue=6e-24, Organism=Homo sapiens, GI188536080, Length=449, Percent_Identity=23.3853006681514, Blast_Score=96, Evalue=7e-20, Organism=Homo sapiens, GI38679950, Length=449, Percent_Identity=23.3853006681514, Blast_Score=96, Evalue=7e-20, Organism=Homo sapiens, GI38679946, Length=449, Percent_Identity=23.3853006681514, Blast_Score=96, Evalue=7e-20, Organism=Homo sapiens, GI37574042, Length=438, Percent_Identity=23.2876712328767, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI24119277, Length=458, Percent_Identity=23.3624454148472, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI226442705, Length=395, Percent_Identity=24.5569620253165, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI226442709, Length=339, Percent_Identity=25.0737463126844, Blast_Score=87, Evalue=3e-17, Organism=Escherichia coli, GI1789016, Length=420, Percent_Identity=31.6666666666667, Blast_Score=174, Evalue=1e-44, Organism=Escherichia coli, GI1787560, Length=407, Percent_Identity=33.6609336609337, Blast_Score=170, Evalue=2e-43, Organism=Escherichia coli, GI1788044, Length=409, Percent_Identity=30.8068459657702, Blast_Score=145, Evalue=5e-36, Organism=Escherichia coli, GI1789759, Length=406, Percent_Identity=28.5714285714286, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI145693181, Length=395, Percent_Identity=28.1012658227848, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI1786991, Length=424, Percent_Identity=27.5943396226415, Blast_Score=112, Evalue=5e-26, Organism=Escherichia coli, GI1786349, Length=272, Percent_Identity=26.8382352941176, Blast_Score=68, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25144271, Length=421, Percent_Identity=25.8907363420428, Blast_Score=134, Evalue=7e-32, Organism=Caenorhabditis elegans, GI32564660, Length=420, Percent_Identity=30, Blast_Score=134, Evalue=9e-32, Organism=Caenorhabditis elegans, GI25144274, Length=286, Percent_Identity=25.8741258741259, Blast_Score=98, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17541228, Length=449, Percent_Identity=22.271714922049, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI71992977, Length=440, Percent_Identity=21.5909090909091, Blast_Score=82, Evalue=7e-16, Organism=Saccharomyces cerevisiae, GI6323470, Length=422, Percent_Identity=29.3838862559242, Blast_Score=160, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6324432, Length=427, Percent_Identity=29.03981264637, Blast_Score=147, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6321456, Length=447, Percent_Identity=23.9373601789709, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI21357415, Length=403, Percent_Identity=27.7915632754342, Blast_Score=148, Evalue=6e-36, Organism=Drosophila melanogaster, GI28574759, Length=460, Percent_Identity=25.2173913043478, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI161085790, Length=470, Percent_Identity=24.468085106383, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI21356575, Length=436, Percent_Identity=23.1651376146789, Blast_Score=87, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005814 - InterPro: IPR004637 - InterPro: IPR012773 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00202 Aminotran_3 [H]
EC number: =2.6.1.76 [H]
Molecular weight: Translated: 46181; Mature: 46050
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: PS00599 AA_TRANSFER_CLASS_2 ; PS00600 AA_TRANSFER_CLASS_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYEHASAPANIFERRESRVRSYCRSFPAVFKSARGSELIAEDGTRYIDFLSGCSTLNYG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHCCCCCCCC HNHPELKQALLDYIGADGVAHGLDMHTRAKARFLNTFERLILKPRSMDHRVLFPGPTGAN CCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCH AVEAALKTARKVTGRTNVIAFTNGFHGMTLGALAATGNSGKRGGAGVPLTGVTHEAFDGY HHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHEECCCCCCCCCCCCCCCCCCHHHHCCC FGEDTDTADQLDRRLSDPSSGLDKPAAIIVETVQGEGGLNVASDAWLRKIEKIARKHGAL CCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCE FIIDDIQAGIGRTGGFFSFEKAGVTPDIITMAKSLSGLGLPFALTLIRPQHDLWKPGEHN EEEECCHHCCCCCCCCCEEHHCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCC GTFRGNNHAFVTATKALELFWADDAFEKETARKAARLRAGLEKIAASASFAGRLKGKGMM CCEECCCEEEEEEEHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SGIEMESGDVAAEICTECFQNGLIIETSGSMDEVVKVLAPLTITDAELDAGLKILADAVR CCCCCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCEEECHHHHHHHHHHHHHHH AVSARRQKSAA HHHHHHHHCCC >Mature Secondary Structure AYEHASAPANIFERRESRVRSYCRSFPAVFKSARGSELIAEDGTRYIDFLSGCSTLNYG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHCCCCCCCC HNHPELKQALLDYIGADGVAHGLDMHTRAKARFLNTFERLILKPRSMDHRVLFPGPTGAN CCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCH AVEAALKTARKVTGRTNVIAFTNGFHGMTLGALAATGNSGKRGGAGVPLTGVTHEAFDGY HHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHEECCCCCCCCCCCCCCCCCCHHHHCCC FGEDTDTADQLDRRLSDPSSGLDKPAAIIVETVQGEGGLNVASDAWLRKIEKIARKHGAL CCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCE FIIDDIQAGIGRTGGFFSFEKAGVTPDIITMAKSLSGLGLPFALTLIRPQHDLWKPGEHN EEEECCHHCCCCCCCCCEEHHCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCC GTFRGNNHAFVTATKALELFWADDAFEKETARKAARLRAGLEKIAASASFAGRLKGKGMM CCEECCCEEEEEEEHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SGIEMESGDVAAEICTECFQNGLIIETSGSMDEVVKVLAPLTITDAELDAGLKILADAVR CCCCCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCEEECHHHHHHHHHHHHHHH AVSARRQKSAA HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]