| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is grxC2 [H]
Identifier: 114799856
GI number: 114799856
Start: 2019757
End: 2020092
Strand: Direct
Name: grxC2 [H]
Synonym: HNE_1949
Alternate gene names: 114799856
Gene position: 2019757-2020092 (Clockwise)
Preceding gene: 114799176
Following gene: 114797359
Centisome position: 54.51
GC content: 56.55
Gene sequence:
>336_bases ATGACTGACCAGGCCACCCTCGACGCCATCGAAAAAGCCGTCAAAAGCAATGACGTTGTCCTCTTCATGAAGGGCACGCC CACCTTCCCGCAATGCGGATTTTCCTCCACTGTGGTGCAGATCCTGGACTATCTGGGCGTCGAATATGTCGCCACCAACG TGCTGGAAGACCAGAACGTCCGCGAAGGCATCAAGCAATACGCCAACTGGCCGACCATCCCCCAACTCTACGTGAAGGGC GAATTCGTCGGCGGCTGCGACATCCTCAAAGAGATGTTCGAAAACGGCGAACTGCGCGACCTGATGGCCGAAAACGGCAT CGAACTGGCCGAATAG
Upstream 100 bases:
>100_bases ACCCGGATGGCGCCGCCAGTCCGGACACTGCCATATGGCGCGCCCTCTTGACCCTCACGCCTCGCCGCATCACATGTGCG CTGAACGCGGAGACACCCCT
Downstream 100 bases:
>100_bases GTCTCGCCCGTCCCGTTATGGCGGGAATTTATAGGGCCGCCTGACCTGCTTTTGTCAAAAGCTGCGCCTCTCCTTGTAGG GTTACAAGGAGACCTTAGCG
Product: glutaredoxin-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MTDQATLDAIEKAVKSNDVVLFMKGTPTFPQCGFSSTVVQILDYLGVEYVATNVLEDQNVREGIKQYANWPTIPQLYVKG EFVGGCDILKEMFENGELRDLMAENGIELAE
Sequences:
>Translated_111_residues MTDQATLDAIEKAVKSNDVVLFMKGTPTFPQCGFSSTVVQILDYLGVEYVATNVLEDQNVREGIKQYANWPTIPQLYVKG EFVGGCDILKEMFENGELRDLMAENGIELAE >Mature_110_residues TDQATLDAIEKAVKSNDVVLFMKGTPTFPQCGFSSTVVQILDYLGVEYVATNVLEDQNVREGIKQYANWPTIPQLYVKGE FVGGCDILKEMFENGELRDLMAENGIELAE
Specific function: Unknown
COG id: COG0278
COG function: function code O; Glutaredoxin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI42516576, Length=105, Percent_Identity=58.0952380952381, Blast_Score=124, Evalue=2e-29, Organism=Homo sapiens, GI95113651, Length=80, Percent_Identity=60, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1787943, Length=101, Percent_Identity=43.5643564356436, Blast_Score=110, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17556042, Length=98, Percent_Identity=56.1224489795918, Blast_Score=120, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71988153, Length=85, Percent_Identity=44.7058823529412, Blast_Score=98, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71988159, Length=85, Percent_Identity=44.7058823529412, Blast_Score=97, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6325198, Length=99, Percent_Identity=56.5656565656566, Blast_Score=121, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6321022, Length=83, Percent_Identity=48.1927710843374, Blast_Score=95, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6320303, Length=85, Percent_Identity=47.0588235294118, Blast_Score=92, Evalue=2e-20, Organism=Drosophila melanogaster, GI24642023, Length=105, Percent_Identity=51.4285714285714, Blast_Score=124, Evalue=2e-29, Organism=Drosophila melanogaster, GI19921242, Length=101, Percent_Identity=38.6138613861386, Blast_Score=92, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002109 - InterPro: IPR014434 - InterPro: IPR004480 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin [H]
EC number: NA
Molecular weight: Translated: 12354; Mature: 12223
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQATLDAIEKAVKSNDVVLFMKGTPTFPQCGFSSTVVQILDYLGVEYVATNVLEDQNV CCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH REGIKQYANWPTIPQLYVKGEFVGGCDILKEMFENGELRDLMAENGIELAE HHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCC >Mature Secondary Structure TDQATLDAIEKAVKSNDVVLFMKGTPTFPQCGFSSTVVQILDYLGVEYVATNVLEDQNV CCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH REGIKQYANWPTIPQLYVKGEFVGGCDILKEMFENGELRDLMAENGIELAE HHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA