| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799855
Identifier: 114799855
GI number: 114799855
Start: 219923
End: 220747
Strand: Reverse
Name: 114799855
Synonym: HNE_0228
Alternate gene names: NA
Gene position: 220747-219923 (Counterclockwise)
Preceding gene: 114797940
Following gene: 114798925
Centisome position: 5.96
GC content: 61.58
Gene sequence:
>825_bases TTGTCCGAGCCTCAAATTGACGCCGCCCCGATCGTTTTTGCAAGTCCGCATTCGGGCAACCACTATCCTGAAGAAATGGT CTCTGCGCTTTGCGTCCCCTTGATGGATGTCCGCAGAACGGAAGACGCCTTCGTGGACGAGCTGTTTTCAAACGCCCCTC ACCATGGCGGAACCCTGCTCGCAGCGCGGTTTGGGCGGTCAGTCGTTGACCTCAACCGCGATCCCCACGAACTCGATCCC GCCATGTTTCATGACGGCCCACCTCGGGCCTGCGCCCTGCCCACGCCGCGCGTTGAAGCAGGTCTTGGCTGCTTGCCCAG GGTCGGCGCGCGGGGCGAAGCGATTTACAGCCGGCTCCTGTACAAGGCGGAGGGAGAACGACGCCTGTCGGGTATCCATG ATGTCTATCATGGCCAGCTATCGGGCCTGCTCGACGCGCAGCGAACCCGGCATGGCCGGGCATTGCTCGTGGATTGCCAC TCGATGCCATCGGTACAGCCTGGCCGGCGCAATTTGACCGACATTGTCCTGGGCGATCGCTTCGGATCAAGCAGTGATGC CCGCTTGGTAAACCGTCTGGAGCGGGTTTTCCGCAATCACGGGCTGACTGTGGCGCGCAACGCACCCTATGCCGGGGGAT ATACCACCCGGCGCTATGGCCGCCCGAAACGCGGCATTCATGCCATTCAGATCGAAATCAATCGCGGCCTCTATATGGAC GAGCAGGCAATTACCCGCGCTGGCGGCTTTTCGGCCCTTCGCCCGATCATGGACGCCGTCATCGTCGAGATGATTGCCGC CATCCGTGAGCTAACCGAGCGATAG
Upstream 100 bases:
>100_bases CGATTTTCAAACCATTGCGCAGATGCCCGATACGTCGCCCATCCTAACGATTGATGAAGGACCGCCCATCGAGCCGCCTG AGCTCGATGCCCCCTTCCTG
Downstream 100 bases:
>100_bases CAACTCCCTGACCGGAAAGAAAAAAGGCCGCGCCCTCAGGCGCGGCCAAAGTCAAAGGGAGGAAACGCCAGAGGCGTCTG CACCGAAGTGCAAGGTCAGA
Product: putative N-formylglutamate amidohydrolase
Products: NA
Alternate protein names: N-Formylglutamate Deformylase; Formiminoglutamase; Hydrolase; N-Formylglutamate Amidohydrolase Family Protein; N-Formylglutamate Amidohydrolase Superfamily; Formylglutamate Amidohydrolase; N-Formylglutamate Amidohydrolase Family; Amidohydrolase; N-Formylglutamate Amidohydrolase HutG; Formylglutamte Amindohyrolase; Histidine Degradation; HutG Protein; N-Formylglutamate Amidohydrolase Protein; N-Formylglutamate_deformylase Protein; Formiminoglutamase Protein; N-Formylglutamate Deformylase Family Protein
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSEPQIDAAPIVFASPHSGNHYPEEMVSALCVPLMDVRRTEDAFVDELFSNAPHHGGTLLAARFGRSVVDLNRDPHELDP AMFHDGPPRACALPTPRVEAGLGCLPRVGARGEAIYSRLLYKAEGERRLSGIHDVYHGQLSGLLDAQRTRHGRALLVDCH SMPSVQPGRRNLTDIVLGDRFGSSSDARLVNRLERVFRNHGLTVARNAPYAGGYTTRRYGRPKRGIHAIQIEINRGLYMD EQAITRAGGFSALRPIMDAVIVEMIAAIRELTER
Sequences:
>Translated_274_residues MSEPQIDAAPIVFASPHSGNHYPEEMVSALCVPLMDVRRTEDAFVDELFSNAPHHGGTLLAARFGRSVVDLNRDPHELDP AMFHDGPPRACALPTPRVEAGLGCLPRVGARGEAIYSRLLYKAEGERRLSGIHDVYHGQLSGLLDAQRTRHGRALLVDCH SMPSVQPGRRNLTDIVLGDRFGSSSDARLVNRLERVFRNHGLTVARNAPYAGGYTTRRYGRPKRGIHAIQIEINRGLYMD EQAITRAGGFSALRPIMDAVIVEMIAAIRELTER >Mature_273_residues SEPQIDAAPIVFASPHSGNHYPEEMVSALCVPLMDVRRTEDAFVDELFSNAPHHGGTLLAARFGRSVVDLNRDPHELDPA MFHDGPPRACALPTPRVEAGLGCLPRVGARGEAIYSRLLYKAEGERRLSGIHDVYHGQLSGLLDAQRTRHGRALLVDCHS MPSVQPGRRNLTDIVLGDRFGSSSDARLVNRLERVFRNHGLTVARNAPYAGGYTTRRYGRPKRGIHAIQIEINRGLYMDE QAITRAGGFSALRPIMDAVIVEMIAAIRELTER
Specific function: Unknown
COG id: COG3741
COG function: function code E; N-formylglutamate amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30245; Mature: 30114
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPQIDAAPIVFASPHSGNHYPEEMVSALCVPLMDVRRTEDAFVDELFSNAPHHGGTLL CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH AARFGRSVVDLNRDPHELDPAMFHDGPPRACALPTPRVEAGLGCLPRVGARGEAIYSRLL HHHHCCHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHH YKAEGERRLSGIHDVYHGQLSGLLDAQRTRHGRALLVDCHSMPSVQPGRRNLTDIVLGDR HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHEEEECC FGSSSDARLVNRLERVFRNHGLTVARNAPYAGGYTTRRYGRPKRGIHAIQIEINRGLYMD CCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHCCCCCCCEEEEEEEECCCEEEC EQAITRAGGFSALRPIMDAVIVEMIAAIRELTER HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEPQIDAAPIVFASPHSGNHYPEEMVSALCVPLMDVRRTEDAFVDELFSNAPHHGGTLL CCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH AARFGRSVVDLNRDPHELDPAMFHDGPPRACALPTPRVEAGLGCLPRVGARGEAIYSRLL HHHHCCHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHH YKAEGERRLSGIHDVYHGQLSGLLDAQRTRHGRALLVDCHSMPSVQPGRRNLTDIVLGDR HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHEEEECC FGSSSDARLVNRLERVFRNHGLTVARNAPYAGGYTTRRYGRPKRGIHAIQIEINRGLYMD CCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHCCCCCCCEEEEEEEECCCEEEC EQAITRAGGFSALRPIMDAVIVEMIAAIRELTER HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA