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The map label for this gene is 114798925

Identifier: 114798925

GI number: 114798925

Start: 219252

End: 219650

Strand: Reverse

Name: 114798925

Synonym: HNE_0227

Alternate gene names: NA

Gene position: 219650-219252 (Counterclockwise)

Preceding gene: 114799855

Following gene: 114797506

Centisome position: 5.93

GC content: 63.16

Gene sequence:

>399_bases
ATGGCTGACGAAACTGACCTGCACGTTGGCAAGCGCCTGCGCCGCCGCCGCCGCCTGCTTGGCATGACACAGCAGGATCT
GGCGTCCCAGGTGGGCGTGCGCTTCCAGCAAATCCAGAAATACGAGTGTGGCGCAAACCGCATCACCGCCTCGCGCCTGT
ATGATCTGGCTCGGGCAATGAATGTGTCCGTCCAGTACTTCTATGATGGCATGGTTGTGCCCGGCACCGTGCCAAACGCG
GCCAATGACGCCGAACAGATGGAAGGCGACATCCTCTCCCAGAAGGAAACCCTGGAGCTGGTGCGTGCGTACTACCGCCT
GAGCGAGCGCCCGCGCCGCCGCCTGCTGGAGCTTGCCAAAGCCCTGGAGCAGGACACTTCCAGCACCGGCGCTGCTTGA

Upstream 100 bases:

>100_bases
TTCGGGCAGTTTCGGCGTCCCGGCACGGCATTTGCGTAGAAACTGCGCGAATATCCTGTTTTGGGACTGATTGGTGGTCC
CGCCAGAATGGAGAGGGATC

Downstream 100 bases:

>100_bases
CCTGATCTCATGGGCGGGGCATCGCCTCGCCCATGACCTCTATCCGAAATATCGCAGACGACATCGCCCTCGCCCGCCGG
CTCGCTGATGCCGCATGGGC

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MADETDLHVGKRLRRRRRLLGMTQQDLASQVGVRFQQIQKYECGANRITASRLYDLARAMNVSVQYFYDGMVVPGTVPNA
ANDAEQMEGDILSQKETLELVRAYYRLSERPRRRLLELAKALEQDTSSTGAA

Sequences:

>Translated_132_residues
MADETDLHVGKRLRRRRRLLGMTQQDLASQVGVRFQQIQKYECGANRITASRLYDLARAMNVSVQYFYDGMVVPGTVPNA
ANDAEQMEGDILSQKETLELVRAYYRLSERPRRRLLELAKALEQDTSSTGAA
>Mature_131_residues
ADETDLHVGKRLRRRRRLLGMTQQDLASQVGVRFQQIQKYECGANRITASRLYDLARAMNVSVQYFYDGMVVPGTVPNAA
NDAEQMEGDILSQKETLELVRAYYRLSERPRRRLLELAKALEQDTSSTGAA

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 15009; Mature: 14878

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADETDLHVGKRLRRRRRLLGMTQQDLASQVGVRFQQIQKYECGANRITASRLYDLARAM
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
NVSVQYFYDGMVVPGTVPNAANDAEQMEGDILSQKETLELVRAYYRLSERPRRRLLELAK
HHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALEQDTSSTGAA
HHHHCCCCCCCC
>Mature Secondary Structure 
ADETDLHVGKRLRRRRRLLGMTQQDLASQVGVRFQQIQKYECGANRITASRLYDLARAM
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
NVSVQYFYDGMVVPGTVPNAANDAEQMEGDILSQKETLELVRAYYRLSERPRRRLLELAK
HHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALEQDTSSTGAA
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868435 [H]