| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799820
Identifier: 114799820
GI number: 114799820
Start: 2161202
End: 2162095
Strand: Reverse
Name: 114799820
Synonym: HNE_2088
Alternate gene names: NA
Gene position: 2162095-2161202 (Counterclockwise)
Preceding gene: 114797324
Following gene: 114800297
Centisome position: 58.36
GC content: 62.86
Gene sequence:
>894_bases ATGCCTGCATTTCTTGATAAGGAAGAGGTAATGCTCGCCCATGATGGGGCGCGGCTTGGCCTGACGGTCTGGAAACCTTC CGGCGCCAAATCTCCGCGACATGTCATTGTCGGCATTCATGGCATGAACAACTATGCGGGCGAGTTCCGCCTGGCCGCCC CGGAATGGGTCGCTGAGGGCAGGGCGGTCTACGCATATGACCAGCGAGGCTTTGGCCGGTCGGCAGGGCGGGGCGTCTGG CCCGATGAAGAGCTGATGCGGGAAGACCTGCGTACTGCCGTCAGTCTCGCCCGGGCGCGCCATCCAAAGGCCACGCTGAC CGTGGTGGCCATCTCGATGGGGTCGGCTGTCGCCATCACGGCTTTTGCATCCGATCGCCCCCCGTCAGCAGACCGGTTGA TCCTGTCTGGACCCGGCCTCAGTGGCTGGGGCGTTCTGAACCCCGCCTATGCTGGCACGCTGATGCTGATGAATTCCATG AGTCCGGGGCTGATCGTGCGCCCGCCCGCGTTCGCAAAGCCCAAGATGTCCGACAATACAGAGTTCCTCGCCCTTCAGGA TGCTGATCCGCTTCATGCCAGAGAAAACCGCGTCGACCAGATTGCCGGTGTTGTAACGCTGATGGAGCAGGCACACGAAG CGGCAGGCCGCCTACCAGCGGGCCTGCCCGTGCTGGCCTCCTATGGGGCGCGGGATGAGGTTGTGCTGCCCGAGGGGCCT CGCCGGACATTCAAAGTCTTCCCGCCAGGGGTCCGCACCGTCTATTACCCCAACGGCTACCACATCCTGCTGAGTGACAA TCAGCGCGCCAAAGTGATCGCCGACTACTCCGCTTTCATGAACGATCCGGCAGCGGCATTACCCAGTGGTTGCGGTCCGT GGCCGTTCCGTTAG
Upstream 100 bases:
>100_bases CGCCGCGATGCCGAGCGGGGAGGGGGAATGGCCTTTCCGTGAAAACTGCACGCATTGGGCGTCTGTTGACCGTCCGCCCG TGGCTTGCTGATGAAGCCTC
Downstream 100 bases:
>100_bases GGATTACAAGCTATTCCACAGCAGGCGCGGCCTTGCAGTGGGCGGCGAATGGACAAATATAAAGGCATCTGCCAATCCTG CAGGCGGCGATTCAGCCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Lysophospholipase; Alpha/Beta Hydrolase Fold; Acylglycerol Lipase; Lipase; Esterase/Lipase; Alpha/Beta Hydrolase Fold-Domain Containing Protein; Monoglyceride Lipase; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold Family Protein; Lysophospholipase-Like Protein
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MPAFLDKEEVMLAHDGARLGLTVWKPSGAKSPRHVIVGIHGMNNYAGEFRLAAPEWVAEGRAVYAYDQRGFGRSAGRGVW PDEELMREDLRTAVSLARARHPKATLTVVAISMGSAVAITAFASDRPPSADRLILSGPGLSGWGVLNPAYAGTLMLMNSM SPGLIVRPPAFAKPKMSDNTEFLALQDADPLHARENRVDQIAGVVTLMEQAHEAAGRLPAGLPVLASYGARDEVVLPEGP RRTFKVFPPGVRTVYYPNGYHILLSDNQRAKVIADYSAFMNDPAAALPSGCGPWPFR
Sequences:
>Translated_297_residues MPAFLDKEEVMLAHDGARLGLTVWKPSGAKSPRHVIVGIHGMNNYAGEFRLAAPEWVAEGRAVYAYDQRGFGRSAGRGVW PDEELMREDLRTAVSLARARHPKATLTVVAISMGSAVAITAFASDRPPSADRLILSGPGLSGWGVLNPAYAGTLMLMNSM SPGLIVRPPAFAKPKMSDNTEFLALQDADPLHARENRVDQIAGVVTLMEQAHEAAGRLPAGLPVLASYGARDEVVLPEGP RRTFKVFPPGVRTVYYPNGYHILLSDNQRAKVIADYSAFMNDPAAALPSGCGPWPFR >Mature_296_residues PAFLDKEEVMLAHDGARLGLTVWKPSGAKSPRHVIVGIHGMNNYAGEFRLAAPEWVAEGRAVYAYDQRGFGRSAGRGVWP DEELMREDLRTAVSLARARHPKATLTVVAISMGSAVAITAFASDRPPSADRLILSGPGLSGWGVLNPAYAGTLMLMNSMS PGLIVRPPAFAKPKMSDNTEFLALQDADPLHARENRVDQIAGVVTLMEQAHEAAGRLPAGLPVLASYGARDEVVLPEGPR RTFKVFPPGVRTVYYPNGYHILLSDNQRAKVIADYSAFMNDPAAALPSGCGPWPFR
Specific function: Unknown
COG id: COG2267
COG function: function code I; Lysophospholipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32040; Mature: 31909
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAFLDKEEVMLAHDGARLGLTVWKPSGAKSPRHVIVGIHGMNNYAGEFRLAAPEWVAEG CCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEECCHHHHCC RAVYAYDQRGFGRSAGRGVWPDEELMREDLRTAVSLARARHPKATLTVVAISMGSAVAIT CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEE AFASDRPPSADRLILSGPGLSGWGVLNPAYAGTLMLMNSMSPGLIVRPPAFAKPKMSDNT EECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHEEEEECCCCCEEECCCCCCCCCCCCCC EFLALQDADPLHARENRVDQIAGVVTLMEQAHEAAGRLPAGLPVLASYGARDEVVLPEGP EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEECCCCC RRTFKVFPPGVRTVYYPNGYHILLSDNQRAKVIADYSAFMNDPAAALPSGCGPWPFR CCEEEECCCCCEEEEECCCEEEEEECCCCEEEEEEHHHHHCCCHHHCCCCCCCCCCC >Mature Secondary Structure PAFLDKEEVMLAHDGARLGLTVWKPSGAKSPRHVIVGIHGMNNYAGEFRLAAPEWVAEG CCCCCCCCEEEEECCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEECCHHHHCC RAVYAYDQRGFGRSAGRGVWPDEELMREDLRTAVSLARARHPKATLTVVAISMGSAVAIT CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEE AFASDRPPSADRLILSGPGLSGWGVLNPAYAGTLMLMNSMSPGLIVRPPAFAKPKMSDNT EECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHEEEEECCCCCEEECCCCCCCCCCCCCC EFLALQDADPLHARENRVDQIAGVVTLMEQAHEAAGRLPAGLPVLASYGARDEVVLPEGP EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEECCCCC RRTFKVFPPGVRTVYYPNGYHILLSDNQRAKVIADYSAFMNDPAAALPSGCGPWPFR CCEEEECCCCCEEEEECCCEEEEEECCCCEEEEEEHHHHHCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA