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The map label for this gene is yebA [C]

Identifier: 114799770

GI number: 114799770

Start: 635690

End: 637066

Strand: Reverse

Name: yebA [C]

Synonym: HNE_0633

Alternate gene names: 114799770

Gene position: 637066-635690 (Counterclockwise)

Preceding gene: 114799325

Following gene: 114797465

Centisome position: 17.19

GC content: 65.36

Gene sequence:

>1377_bases
TTGACCCAGGACGACCTTCCCATCGCCCCGGCAACCCCGCCGAAACGCAATCTTTCGCAGGGTATGAAAAGCCTTGTCGT
GCTCGGCGTGCTGGGGTCTGCCTCGGCGATTGCCGGCCTCGTGATGGCCGGGCGGCCGGACGCCGCGATGGTGCAGACCG
CCGAAGCGGCCACACCGCTGCCGCTGGCCGCGCGGCTTGTGTCCGCCGTCGATGTGGTCGGAGCGCCCAAACAGCTGGTC
AAGGCGGAAGGCAAGCTGGAGCGGAACGAGACGCTGACGGGCCTGGTCAACCGGCTCGGCGCGCCTGTGGGCGAAGCCAA
TGCGGCGCTGCAGGCAGTCTACAGCAAGGATCTGATCGATCACCGGCGCCTGCGCCCCGGCCTTGAGGCGGAAACCTTCG
TGGAAGATGGCCGCCTCACCGCGCTGGCGATCAAGGCAGACGCCGATCGCAGCCTGCTGGTGACGCGCACGCTGGAAGGC
GGGTGGCAGGCCACGCAGCTGAATGCAAAGCTGAAACCGAGCTACAAGCGGGTGGCCGCAGAGATTGACGGCTCGATCTA
TAACGCCGCCCTGAAGCTGGGCGCGGGCGATCAGCAGGTCGTCGATTTTGCCAGCGCCTTTGCCTATGACATTGACTTTC
AACGGGAAATCCACCCCGGCGACCGGTTCGAGATTTTCTTCGAGACCTTCGTGGACGAGCGCGGCAATCCGGTGCGCAAT
GGCGAGGTGCTGTATGCGGCGCTGGACGGCAAGGCGCTGAAGCGCGGCTTCTATCGCTTCACGCCGAGCGATGATGGCGT
CAGCGACTATTTCGACGAGAAGGGCGAGAGCGCTACGAAATTCCTGATGAAGACGCCGATCAATGGCGCGCGCATCTCGT
CCAATTTCGGCACGCGGCGCCATCCGATCTCGGGCTACACACGCCTGCACAAGGGCACTGACTTTGCCGCCCCCACCGGC
ACGCCGGTCTATGCGGCGGGCTCGGGCACCGTGCAGCGGGCGAGCTGGAATGGCGGCTATGGCAATTACATCAAGATCAA
GCACACGCGCGGCTATGACACCGCCTATGCCCACCTCTCGCGCTATGCCAAGGGCGTGAAATCGGGCCGCAAGGTGCGCC
AGGGCGAAGTGATCGGCTATGTCGGCTCGACCGGCGCGTCCACCGGCCCGCACCTGCACTATGAGGTGTATGTCGACGGC
AAGCCGCTCAACGCGATGTCGCTGAAGCTGCCGACGGGGCGCAAACTGGCCGAAGATCCCGCCATGCTGGCCGAATTCCG
CCAGCACAAGGACGCCATCGATACGCTGCGCACCAGCGGTACGGCGGGCCCGATGGCCGCGGTTGTGCCGCGTGAAGCAA
CGCCCGTAAGCCCCTGA

Upstream 100 bases:

>100_bases
CTTCTCGAATCTTTAAGTTGATCGCGAGACGGTTTTAGGGCGAGCGATATACGTACCAGCCTGAACGGCCGGGGGGACGT
CAAATGACAGGATACCAAGC

Downstream 100 bases:

>100_bases
AACCTCGCAGAAAACTTAGCCGTTAACGAGAGCGGCTGTTGAACAATCTCTCCTCTGGGGCGATTCTGGTCCCTTTCTTG
CTTTCTCCCTGCCAGACCCT

Product: M23 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 457

Protein sequence:

>458_residues
MTQDDLPIAPATPPKRNLSQGMKSLVVLGVLGSASAIAGLVMAGRPDAAMVQTAEAATPLPLAARLVSAVDVVGAPKQLV
KAEGKLERNETLTGLVNRLGAPVGEANAALQAVYSKDLIDHRRLRPGLEAETFVEDGRLTALAIKADADRSLLVTRTLEG
GWQATQLNAKLKPSYKRVAAEIDGSIYNAALKLGAGDQQVVDFASAFAYDIDFQREIHPGDRFEIFFETFVDERGNPVRN
GEVLYAALDGKALKRGFYRFTPSDDGVSDYFDEKGESATKFLMKTPINGARISSNFGTRRHPISGYTRLHKGTDFAAPTG
TPVYAAGSGTVQRASWNGGYGNYIKIKHTRGYDTAYAHLSRYAKGVKSGRKVRQGEVIGYVGSTGASTGPHLHYEVYVDG
KPLNAMSLKLPTGRKLAEDPAMLAEFRQHKDAIDTLRTSGTAGPMAAVVPREATPVSP

Sequences:

>Translated_458_residues
MTQDDLPIAPATPPKRNLSQGMKSLVVLGVLGSASAIAGLVMAGRPDAAMVQTAEAATPLPLAARLVSAVDVVGAPKQLV
KAEGKLERNETLTGLVNRLGAPVGEANAALQAVYSKDLIDHRRLRPGLEAETFVEDGRLTALAIKADADRSLLVTRTLEG
GWQATQLNAKLKPSYKRVAAEIDGSIYNAALKLGAGDQQVVDFASAFAYDIDFQREIHPGDRFEIFFETFVDERGNPVRN
GEVLYAALDGKALKRGFYRFTPSDDGVSDYFDEKGESATKFLMKTPINGARISSNFGTRRHPISGYTRLHKGTDFAAPTG
TPVYAAGSGTVQRASWNGGYGNYIKIKHTRGYDTAYAHLSRYAKGVKSGRKVRQGEVIGYVGSTGASTGPHLHYEVYVDG
KPLNAMSLKLPTGRKLAEDPAMLAEFRQHKDAIDTLRTSGTAGPMAAVVPREATPVSP
>Mature_457_residues
TQDDLPIAPATPPKRNLSQGMKSLVVLGVLGSASAIAGLVMAGRPDAAMVQTAEAATPLPLAARLVSAVDVVGAPKQLVK
AEGKLERNETLTGLVNRLGAPVGEANAALQAVYSKDLIDHRRLRPGLEAETFVEDGRLTALAIKADADRSLLVTRTLEGG
WQATQLNAKLKPSYKRVAAEIDGSIYNAALKLGAGDQQVVDFASAFAYDIDFQREIHPGDRFEIFFETFVDERGNPVRNG
EVLYAALDGKALKRGFYRFTPSDDGVSDYFDEKGESATKFLMKTPINGARISSNFGTRRHPISGYTRLHKGTDFAAPTGT
PVYAAGSGTVQRASWNGGYGNYIKIKHTRGYDTAYAHLSRYAKGVKSGRKVRQGEVIGYVGSTGASTGPHLHYEVYVDGK
PLNAMSLKLPTGRKLAEDPAMLAEFRQHKDAIDTLRTSGTAGPMAAVVPREATPVSP

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=328, Percent_Identity=30.7926829268293, Blast_Score=139, Evalue=4e-34,
Organism=Escherichia coli, GI87082174, Length=107, Percent_Identity=39.2523364485981, Blast_Score=65, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 49089; Mature: 48958

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQDDLPIAPATPPKRNLSQGMKSLVVLGVLGSASAIAGLVMAGRPDAAMVQTAEAATPL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHEEECCCCCCC
PLAARLVSAVDVVGAPKQLVKAEGKLERNETLTGLVNRLGAPVGEANAALQAVYSKDLID
HHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
HRRLRPGLEAETFVEDGRLTALAIKADADRSLLVTRTLEGGWQATQLNAKLKPSYKRVAA
HHHCCCCCCHHHHHCCCCEEEEEEEECCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHH
EIDGSIYNAALKLGAGDQQVVDFASAFAYDIDFQREIHPGDRFEIFFETFVDERGNPVRN
HHCCHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCCC
GEVLYAALDGKALKRGFYRFTPSDDGVSDYFDEKGESATKFLMKTPINGARISSNFGTRR
CCEEEEEECCHHHHCCCEEECCCCCCHHHHHHCCCCHHHHHHHHCCCCCCEEECCCCCCC
HPISGYTRLHKGTDFAAPTGTPVYAAGSGTVQRASWNGGYGNYIKIKHTRGYDTAYAHLS
CCCCCHHHHCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCEEEEEECCCCHHHHHHHH
RYAKGVKSGRKVRQGEVIGYVGSTGASTGPHLHYEVYVDGKPLNAMSLKLPTGRKLAEDP
HHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCH
AMLAEFRQHKDAIDTLRTSGTAGPMAAVVPREATPVSP
HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure 
TQDDLPIAPATPPKRNLSQGMKSLVVLGVLGSASAIAGLVMAGRPDAAMVQTAEAATPL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHEEECCCCCCC
PLAARLVSAVDVVGAPKQLVKAEGKLERNETLTGLVNRLGAPVGEANAALQAVYSKDLID
HHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
HRRLRPGLEAETFVEDGRLTALAIKADADRSLLVTRTLEGGWQATQLNAKLKPSYKRVAA
HHHCCCCCCHHHHHCCCCEEEEEEEECCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHH
EIDGSIYNAALKLGAGDQQVVDFASAFAYDIDFQREIHPGDRFEIFFETFVDERGNPVRN
HHCCHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCCC
GEVLYAALDGKALKRGFYRFTPSDDGVSDYFDEKGESATKFLMKTPINGARISSNFGTRR
CCEEEEEECCHHHHCCCEEECCCCCCHHHHHHCCCCHHHHHHHHCCCCCCEEECCCCCCC
HPISGYTRLHKGTDFAAPTGTPVYAAGSGTVQRASWNGGYGNYIKIKHTRGYDTAYAHLS
CCCCCHHHHCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCEEEEEECCCCHHHHHHHH
RYAKGVKSGRKVRQGEVIGYVGSTGASTGPHLHYEVYVDGKPLNAMSLKLPTGRKLAEDP
HHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCH
AMLAEFRQHKDAIDTLRTSGTAGPMAAVVPREATPVSP
HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]