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The map label for this gene is yebA [C]

Identifier: 114797465

GI number: 114797465

Start: 634174

End: 635544

Strand: Reverse

Name: yebA [C]

Synonym: HNE_0632

Alternate gene names: 114797465

Gene position: 635544-634174 (Counterclockwise)

Preceding gene: 114799770

Following gene: 114798013

Centisome position: 17.15

GC content: 67.83

Gene sequence:

>1371_bases
ATGAAACGGACGCGAAAGCTGCCTCGGATTCCTGTCGCCGTACGGCGTCTGGACATGACATCGCGCACCGCCGAGCGCGT
TGGCGCGGCGGCGGTGATCCTCGTGATGCTCGCGCTGTTCCTGCTGGTGCGGGCCGAGCCGGAAGCCCTCAAACCGCTGG
GCCTGTTGCAGATGAACGATCTGCGCGCCGAAGCGGGCGAAACCGACACCGTGACCCGCACAGGGACAGTCACCGCCAGC
GTCTCGACCGTGGATGTGCTCGAAGTTCTCGGCGCCAGCCCGGAGGACGCCACGGCGGCCGCCATTGCGCTGCGCGAAGC
CTCCCCCACGCGGGGCCAGCGCCTGCGCCAGGGCACACCCCTCTCTGCCTGGTTTGAAGCCAGCGCCGATGGCCGCGAGC
GCCTTGCCGGTGTCAGCGCCAAGCTGAGCCCCAAAGCCACCCTCGTGGCCAGCCGCAGCGCCGATGGCCGCTTTACCGCC
AACCTTCTCTCGGCGCGCACCACCACCGTGCTTCACCGCGTGGCCGGCCGCATCGACACGACGCTGGCCGACGCGATCCT
CGAAGGCGGCGGCACGCGCCAGCATGCCGAAATGTTTGCCGGCCTGTTCCCCGAAGACCCGGTCCTCGGCCAGGGCGGGC
GCAAGGGCGAGCGGTTTGACGCGGTGATCGAAGTGATCGCCGACGAGCGCGGCAATTTTCTCGAAGCGGGCGATCTCGTC
TTCGCGGCTTTCAACGGCCAGGACGCTTCGGGCAGCTGGTATCGCTTCACGCCGGAAGATACCGGCCTGCCGGAATTCTA
CAGTGGCAGCGGCATTGCGGGCGATGAATTCCTGCTGCGCGATCCGGTGCGCGGGGCGCAGATGAATTCCGGCTTCGGCA
ACCGGCTCCACCCGATCACCGGCGAAATGCTGCTCCATGCCGGGATTGATTTCCGCGCGCCCATCGGCACGCCGATCCGC
GCGGCAGGCTCGGGCCTTGTGACCGACATGCGCTGGGGCGATGGCTATGGCTGGTTCGTCCGTATCCGGCATGAACGCGG
CTATGAGACCGTCTATGCGCATATGTCCGGCTTTGCCGAAGGGCTGACACCGGGGCGCACCGTGATGCGCGGCGACATCA
TCGGCTTTGTCGGCTCCACCGGCTCCAGCACGGGCGCGCACCTGCATTATGAAGTGCTGCGCAACGGGTTCTATGTGAAC
CCGGTGACCCTCGCCCTGCCGACGGGCCGCGACCTCTCCGGAAACAAGGACGTGTTCGCCGCCTTCGAAGCCCAGCGCGA
TACCATCGACGCCTTCCGCAACCAGGCCCCCGGCGGCCAGCTTTTCGCCGCCGCCAACTCCGCCCGGATGGCAAACGCCC
CGGCGCCTTGA

Upstream 100 bases:

>100_bases
ATCTCTCCTCTGGGGCGATTCTGGTCCCTTTCTTGCTTTCTCCCTGCCAGACCCTTGCCTCGACCCAGGTTCGGGCCCCG
CTCTGGATGGGAGACACGAC

Downstream 100 bases:

>100_bases
GGGCGCCGAGGCGATTTAATCCGTCTACACGGAGTTCCGGCACCGCTCAGTTGAGCGCAGCCCGGCCTTTGGCAAAGTCG
TTGGGCACGCCGTTGATGGC

Product: M23 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MKRTRKLPRIPVAVRRLDMTSRTAERVGAAAVILVMLALFLLVRAEPEALKPLGLLQMNDLRAEAGETDTVTRTGTVTAS
VSTVDVLEVLGASPEDATAAAIALREASPTRGQRLRQGTPLSAWFEASADGRERLAGVSAKLSPKATLVASRSADGRFTA
NLLSARTTTVLHRVAGRIDTTLADAILEGGGTRQHAEMFAGLFPEDPVLGQGGRKGERFDAVIEVIADERGNFLEAGDLV
FAAFNGQDASGSWYRFTPEDTGLPEFYSGSGIAGDEFLLRDPVRGAQMNSGFGNRLHPITGEMLLHAGIDFRAPIGTPIR
AAGSGLVTDMRWGDGYGWFVRIRHERGYETVYAHMSGFAEGLTPGRTVMRGDIIGFVGSTGSSTGAHLHYEVLRNGFYVN
PVTLALPTGRDLSGNKDVFAAFEAQRDTIDAFRNQAPGGQLFAAANSARMANAPAP

Sequences:

>Translated_456_residues
MKRTRKLPRIPVAVRRLDMTSRTAERVGAAAVILVMLALFLLVRAEPEALKPLGLLQMNDLRAEAGETDTVTRTGTVTAS
VSTVDVLEVLGASPEDATAAAIALREASPTRGQRLRQGTPLSAWFEASADGRERLAGVSAKLSPKATLVASRSADGRFTA
NLLSARTTTVLHRVAGRIDTTLADAILEGGGTRQHAEMFAGLFPEDPVLGQGGRKGERFDAVIEVIADERGNFLEAGDLV
FAAFNGQDASGSWYRFTPEDTGLPEFYSGSGIAGDEFLLRDPVRGAQMNSGFGNRLHPITGEMLLHAGIDFRAPIGTPIR
AAGSGLVTDMRWGDGYGWFVRIRHERGYETVYAHMSGFAEGLTPGRTVMRGDIIGFVGSTGSSTGAHLHYEVLRNGFYVN
PVTLALPTGRDLSGNKDVFAAFEAQRDTIDAFRNQAPGGQLFAAANSARMANAPAP
>Mature_456_residues
MKRTRKLPRIPVAVRRLDMTSRTAERVGAAAVILVMLALFLLVRAEPEALKPLGLLQMNDLRAEAGETDTVTRTGTVTAS
VSTVDVLEVLGASPEDATAAAIALREASPTRGQRLRQGTPLSAWFEASADGRERLAGVSAKLSPKATLVASRSADGRFTA
NLLSARTTTVLHRVAGRIDTTLADAILEGGGTRQHAEMFAGLFPEDPVLGQGGRKGERFDAVIEVIADERGNFLEAGDLV
FAAFNGQDASGSWYRFTPEDTGLPEFYSGSGIAGDEFLLRDPVRGAQMNSGFGNRLHPITGEMLLHAGIDFRAPIGTPIR
AAGSGLVTDMRWGDGYGWFVRIRHERGYETVYAHMSGFAEGLTPGRTVMRGDIIGFVGSTGSSTGAHLHYEVLRNGFYVN
PVTLALPTGRDLSGNKDVFAAFEAQRDTIDAFRNQAPGGQLFAAANSARMANAPAP

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=165, Percent_Identity=38.7878787878788, Blast_Score=105, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 48643; Mature: 48643

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTRKLPRIPVAVRRLDMTSRTAERVGAAAVILVMLALFLLVRAEPEALKPLGLLQMND
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEECC
LRAEAGETDTVTRTGTVTASVSTVDVLEVLGASPEDATAAAIALREASPTRGQRLRQGTP
HHHCCCCCCCEEECCEEEEECHHHHHHHHHCCCCCCCHHHEEEEECCCCCHHHHHHCCCC
LSAWFEASADGRERLAGVSAKLSPKATLVASRSADGRFTANLLSARTTTVLHRVAGRIDT
CHHHEECCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TLADAILEGGGTRQHAEMFAGLFPEDPVLGQGGRKGERFDAVIEVIADERGNFLEAGDLV
HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCEE
FAAFNGQDASGSWYRFTPEDTGLPEFYSGSGIAGDEFLLRDPVRGAQMNSGFGNRLHPIT
EEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
GEMLLHAGIDFRAPIGTPIRAAGSGLVTDMRWGDGYGWFVRIRHERGYETVYAHMSGFAE
HHHHEECCCCCCCCCCCCHHHCCCCCEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHH
GLTPGRTVMRGDIIGFVGSTGSSTGAHLHYEVLRNGFYVNPVTLALPTGRDLSGNKDVFA
CCCCCCEEEECCEEEEECCCCCCCCCEEEHHHHHCCEEECCEEEEECCCCCCCCCCCEEE
AFEAQRDTIDAFRNQAPGGQLFAAANSARMANAPAP
EEHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MKRTRKLPRIPVAVRRLDMTSRTAERVGAAAVILVMLALFLLVRAEPEALKPLGLLQMND
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEECC
LRAEAGETDTVTRTGTVTASVSTVDVLEVLGASPEDATAAAIALREASPTRGQRLRQGTP
HHHCCCCCCCEEECCEEEEECHHHHHHHHHCCCCCCCHHHEEEEECCCCCHHHHHHCCCC
LSAWFEASADGRERLAGVSAKLSPKATLVASRSADGRFTANLLSARTTTVLHRVAGRIDT
CHHHEECCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TLADAILEGGGTRQHAEMFAGLFPEDPVLGQGGRKGERFDAVIEVIADERGNFLEAGDLV
HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCEE
FAAFNGQDASGSWYRFTPEDTGLPEFYSGSGIAGDEFLLRDPVRGAQMNSGFGNRLHPIT
EEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
GEMLLHAGIDFRAPIGTPIRAAGSGLVTDMRWGDGYGWFVRIRHERGYETVYAHMSGFAE
HHHHEECCCCCCCCCCCCHHHCCCCCEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHH
GLTPGRTVMRGDIIGFVGSTGSSTGAHLHYEVLRNGFYVNPVTLALPTGRDLSGNKDVFA
CCCCCCEEEECCEEEEECCCCCCCCCEEEHHHHHCCEEECCEEEEECCCCCCCCCCCEEE
AFEAQRDTIDAFRNQAPGGQLFAAANSARMANAPAP
EEHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]