Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114799760

Identifier: 114799760

GI number: 114799760

Start: 767450

End: 769180

Strand: Direct

Name: 114799760

Synonym: HNE_0760

Alternate gene names: NA

Gene position: 767450-769180 (Clockwise)

Preceding gene: 114799024

Following gene: 114797084

Centisome position: 20.71

GC content: 64.07

Gene sequence:

>1731_bases
ATGCCGTGCCCCTGCCGCCTCAGCCTTGCCGCTCTCCGGCGCGCGCGGGAGCAGGGCGGCAATGTGGCGATCCTGTTCGC
GCTCATCGCGCCGATCGCCACACTGATGATGGCGATGGCCATCGACCTCGGCATGGTCAACCTCCAGCGCCGCAACATGC
AGTCGATGACCGACCTTGCCGCCATTACCGCTGCCGGTGACCTGCATAAGGCAGAAACGCGCGTCCTGACACTTCTCTCC
GAAAATGGCTTCGGCGATGTCCTGCTTCTTGCTGAAGAGGACCGGCCCAAACGCCTCGATCCACGTTACCCCTCCCGCGC
CTGGGTCGAAGTTGTGAAAGGGCACTACACCGCTGATGCCATGCTCCCCCCGGCCCTGCGTTTCGAGGCCGGGGGTGAGC
CCTTTAATTCGGTGCGGGTAACAGTGGTTCAGTCCGGCCGGTATTTCATTATGGACGGGATACAGGCGCCCCCCCTGATC
ACGACATCCGGTGTTGCCTATTCAACAGCGGAGGCGGCGTTCTCCGTCGGCTCGCGTCTTGTGCGGATAGAGAATGGCGC
GCTCAACGCGCTCCTCGGCAGTCTGCTGGGCAGTGAGCTGCGCCTCACGGCAATGGATTACCACGCGTTGATCGGCGCTG
ACATCGCTCTGCTTCAGATGCTGGATGTCCTGGCAACAGACCTTGACCTGACCGGGGTCAGCTATGACGACATCCTGGAG
ACGCAGATCAGCGCGGCGCGCCTCGCTGCGGCCATCCGCCAGACCGGCATGCTCAGCGTTCAGGCCCGCACGGCGCTTGG
CCGGATCGAGGCGCATGCCGGCGCCCTGTCTACCCGGATCAGATTGTCTGATGCGATTGATCTGGGTACCACCGGCAAGC
TGAAACCAGATGACACCAGACCAAAGCCCGCTTTGCAAGCCCCGGTCATGGAACTGCTCACTGCCGCCATCACGGCCTCC
AACGGCGAGCACCAGGTCGCCCTCGATCTGGGCACGTCGATCCCCGGACTGTTGAAAACCCATGTTGAACTGAACATCGG
CGAGCGGCCGCAAAATTCTCCCTGGTTGCGCCTGTCCGGTCCCAACGCCGTCGTCACGACGGCGCAGACACGGCTGAAGG
TCGATCTTGAAGTGCCCGGCCTGGCGCTGCTGGCAGGGACCAGGGTCCGTATCCCGCTATACGTGGAAATCGCGTCGGCT
GAGGCCCGGCTCCGGAAAGTGTCCTGCCGTGCCACGCGCCCCGGCGAAACCATGGTGACCGTGGCCGCGCAACCCTCCGT
CGGCCGCGTAATGATCGGAGAGATCAGCCGCAATGACTTCGAGCAAATGGGCCGCACGATGCGTGTCTCGCTTACAAAGA
TCGTCGATACGGTGCTGCTGGATGTGCGCGCCAGGGCGGATGCGCGTATCGGAAATGTGAGGTCTGCGGACCTTTCCTTC
AGCCAGGCCGACATCGACGCCGGGCGCATCAGGACAGCCACAACCGGCACCTATACCTCGTCGCTGCTGGGCTCCGCGCT
GCGAGACCTGGAGGTGCGGGTCGATGCCGGACCGCTCTCTCTGGCGACGCCGTCCCTGATACAGGCGGCCCTGGGCGCGA
CGCTGACGCCGGTTCTGGAGCCGGTGGACACTGTCGTCTACAACCTGCTCAGCGTTCTGGGCGTCCATCTGGGCGAAGCC
GACATCCGCGTCCATGGCGTCACCTGCCAGGCACCCGTTCTCGTTCAGTGA

Upstream 100 bases:

>100_bases
GACGCCAGCAGCCTGCCCATCTGGAATCTCGGGCCGCCTCTGCCCCTGCCGGACAAGACAATCCGCAGCGTCTCCGTCAT
CCGGGCGGGAGGGTTCTGAA

Downstream 100 bases:

>100_bases
TTAATATGTCCGGAGACGGACTGATCGGGAAGATCAGCCGGCGGCTTCAGACCGGGCGTTTCTCATCGCCTTCGCCGCCC
CAGAAGCGTTTGATCTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 576; Mature: 575

Protein sequence:

>576_residues
MPCPCRLSLAALRRAREQGGNVAILFALIAPIATLMMAMAIDLGMVNLQRRNMQSMTDLAAITAAGDLHKAETRVLTLLS
ENGFGDVLLLAEEDRPKRLDPRYPSRAWVEVVKGHYTADAMLPPALRFEAGGEPFNSVRVTVVQSGRYFIMDGIQAPPLI
TTSGVAYSTAEAAFSVGSRLVRIENGALNALLGSLLGSELRLTAMDYHALIGADIALLQMLDVLATDLDLTGVSYDDILE
TQISAARLAAAIRQTGMLSVQARTALGRIEAHAGALSTRIRLSDAIDLGTTGKLKPDDTRPKPALQAPVMELLTAAITAS
NGEHQVALDLGTSIPGLLKTHVELNIGERPQNSPWLRLSGPNAVVTTAQTRLKVDLEVPGLALLAGTRVRIPLYVEIASA
EARLRKVSCRATRPGETMVTVAAQPSVGRVMIGEISRNDFEQMGRTMRVSLTKIVDTVLLDVRARADARIGNVRSADLSF
SQADIDAGRIRTATTGTYTSSLLGSALRDLEVRVDAGPLSLATPSLIQAALGATLTPVLEPVDTVVYNLLSVLGVHLGEA
DIRVHGVTCQAPVLVQ

Sequences:

>Translated_576_residues
MPCPCRLSLAALRRAREQGGNVAILFALIAPIATLMMAMAIDLGMVNLQRRNMQSMTDLAAITAAGDLHKAETRVLTLLS
ENGFGDVLLLAEEDRPKRLDPRYPSRAWVEVVKGHYTADAMLPPALRFEAGGEPFNSVRVTVVQSGRYFIMDGIQAPPLI
TTSGVAYSTAEAAFSVGSRLVRIENGALNALLGSLLGSELRLTAMDYHALIGADIALLQMLDVLATDLDLTGVSYDDILE
TQISAARLAAAIRQTGMLSVQARTALGRIEAHAGALSTRIRLSDAIDLGTTGKLKPDDTRPKPALQAPVMELLTAAITAS
NGEHQVALDLGTSIPGLLKTHVELNIGERPQNSPWLRLSGPNAVVTTAQTRLKVDLEVPGLALLAGTRVRIPLYVEIASA
EARLRKVSCRATRPGETMVTVAAQPSVGRVMIGEISRNDFEQMGRTMRVSLTKIVDTVLLDVRARADARIGNVRSADLSF
SQADIDAGRIRTATTGTYTSSLLGSALRDLEVRVDAGPLSLATPSLIQAALGATLTPVLEPVDTVVYNLLSVLGVHLGEA
DIRVHGVTCQAPVLVQ
>Mature_575_residues
PCPCRLSLAALRRAREQGGNVAILFALIAPIATLMMAMAIDLGMVNLQRRNMQSMTDLAAITAAGDLHKAETRVLTLLSE
NGFGDVLLLAEEDRPKRLDPRYPSRAWVEVVKGHYTADAMLPPALRFEAGGEPFNSVRVTVVQSGRYFIMDGIQAPPLIT
TSGVAYSTAEAAFSVGSRLVRIENGALNALLGSLLGSELRLTAMDYHALIGADIALLQMLDVLATDLDLTGVSYDDILET
QISAARLAAAIRQTGMLSVQARTALGRIEAHAGALSTRIRLSDAIDLGTTGKLKPDDTRPKPALQAPVMELLTAAITASN
GEHQVALDLGTSIPGLLKTHVELNIGERPQNSPWLRLSGPNAVVTTAQTRLKVDLEVPGLALLAGTRVRIPLYVEIASAE
ARLRKVSCRATRPGETMVTVAAQPSVGRVMIGEISRNDFEQMGRTMRVSLTKIVDTVLLDVRARADARIGNVRSADLSFS
QADIDAGRIRTATTGTYTSSLLGSALRDLEVRVDAGPLSLATPSLIQAALGATLTPVLEPVDTVVYNLLSVLGVHLGEAD
IRVHGVTCQAPVLVQ

Specific function: Unknown

COG id: COG4655

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61337; Mature: 61206

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCPCRLSLAALRRAREQGGNVAILFALIAPIATLMMAMAIDLGMVNLQRRNMQSMTDLA
CCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
AITAAGDLHKAETRVLTLLSENGFGDVLLLAEEDRPKRLDPRYPSRAWVEVVKGHYTADA
HHHHCCCCHHHHHEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCC
MLPPALRFEAGGEPFNSVRVTVVQSGRYFIMDGIQAPPLITTSGVAYSTAEAAFSVGSRL
CCCCCEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCEEEECCCEEHHHHHHHHHCCEE
VRIENGALNALLGSLLGSELRLTAMDYHALIGADIALLQMLDVLATDLDLTGVSYDDILE
EEEECCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
TQISAARLAAAIRQTGMLSVQARTALGRIEAHAGALSTRIRLSDAIDLGTTGKLKPDDTR
HHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCHHHEEEEEECCCCCCCCCCCCCCCCC
PKPALQAPVMELLTAAITASNGEHQVALDLGTSIPGLLKTHVELNIGERPQNSPWLRLSG
CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHEEEEEEECCCCCCCCCEEEECC
PNAVVTTAQTRLKVDLEVPGLALLAGTRVRIPLYVEIASAEARLRKVSCRATRPGETMVT
CCEEEEEEEEEEEEEEECCCEEEEECCEEEEEEEEEEECCHHHHHHHCCCCCCCCCEEEE
VAAQPSVGRVMIGEISRNDFEQMGRTMRVSLTKIVDTVLLDVRARADARIGNVRSADLSF
EEECCCCCEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC
SQADIDAGRIRTATTGTYTSSLLGSALRDLEVRVDAGPLSLATPSLIQAALGATLTPVLE
CCCCCCCCCEEEEECCCHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHCCHHHHHHH
PVDTVVYNLLSVLGVHLGEADIRVHGVTCQAPVLVQ
HHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEC
>Mature Secondary Structure 
PCPCRLSLAALRRAREQGGNVAILFALIAPIATLMMAMAIDLGMVNLQRRNMQSMTDLA
CCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
AITAAGDLHKAETRVLTLLSENGFGDVLLLAEEDRPKRLDPRYPSRAWVEVVKGHYTADA
HHHHCCCCHHHHHEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCC
MLPPALRFEAGGEPFNSVRVTVVQSGRYFIMDGIQAPPLITTSGVAYSTAEAAFSVGSRL
CCCCCEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCEEEECCCEEHHHHHHHHHCCEE
VRIENGALNALLGSLLGSELRLTAMDYHALIGADIALLQMLDVLATDLDLTGVSYDDILE
EEEECCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
TQISAARLAAAIRQTGMLSVQARTALGRIEAHAGALSTRIRLSDAIDLGTTGKLKPDDTR
HHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCHHHEEEEEECCCCCCCCCCCCCCCCC
PKPALQAPVMELLTAAITASNGEHQVALDLGTSIPGLLKTHVELNIGERPQNSPWLRLSG
CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHEEEEEEECCCCCCCCCEEEECC
PNAVVTTAQTRLKVDLEVPGLALLAGTRVRIPLYVEIASAEARLRKVSCRATRPGETMVT
CCEEEEEEEEEEEEEEECCCEEEEECCEEEEEEEEEEECCHHHHHHHCCCCCCCCCEEEE
VAAQPSVGRVMIGEISRNDFEQMGRTMRVSLTKIVDTVLLDVRARADARIGNVRSADLSF
EEECCCCCEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC
SQADIDAGRIRTATTGTYTSSLLGSALRDLEVRVDAGPLSLATPSLIQAALGATLTPVLE
CCCCCCCCCEEEEECCCHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHCCHHHHHHH
PVDTVVYNLLSVLGVHLGEADIRVHGVTCQAPVLVQ
HHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA