| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114799760
Identifier: 114799760
GI number: 114799760
Start: 767450
End: 769180
Strand: Direct
Name: 114799760
Synonym: HNE_0760
Alternate gene names: NA
Gene position: 767450-769180 (Clockwise)
Preceding gene: 114799024
Following gene: 114797084
Centisome position: 20.71
GC content: 64.07
Gene sequence:
>1731_bases ATGCCGTGCCCCTGCCGCCTCAGCCTTGCCGCTCTCCGGCGCGCGCGGGAGCAGGGCGGCAATGTGGCGATCCTGTTCGC GCTCATCGCGCCGATCGCCACACTGATGATGGCGATGGCCATCGACCTCGGCATGGTCAACCTCCAGCGCCGCAACATGC AGTCGATGACCGACCTTGCCGCCATTACCGCTGCCGGTGACCTGCATAAGGCAGAAACGCGCGTCCTGACACTTCTCTCC GAAAATGGCTTCGGCGATGTCCTGCTTCTTGCTGAAGAGGACCGGCCCAAACGCCTCGATCCACGTTACCCCTCCCGCGC CTGGGTCGAAGTTGTGAAAGGGCACTACACCGCTGATGCCATGCTCCCCCCGGCCCTGCGTTTCGAGGCCGGGGGTGAGC CCTTTAATTCGGTGCGGGTAACAGTGGTTCAGTCCGGCCGGTATTTCATTATGGACGGGATACAGGCGCCCCCCCTGATC ACGACATCCGGTGTTGCCTATTCAACAGCGGAGGCGGCGTTCTCCGTCGGCTCGCGTCTTGTGCGGATAGAGAATGGCGC GCTCAACGCGCTCCTCGGCAGTCTGCTGGGCAGTGAGCTGCGCCTCACGGCAATGGATTACCACGCGTTGATCGGCGCTG ACATCGCTCTGCTTCAGATGCTGGATGTCCTGGCAACAGACCTTGACCTGACCGGGGTCAGCTATGACGACATCCTGGAG ACGCAGATCAGCGCGGCGCGCCTCGCTGCGGCCATCCGCCAGACCGGCATGCTCAGCGTTCAGGCCCGCACGGCGCTTGG CCGGATCGAGGCGCATGCCGGCGCCCTGTCTACCCGGATCAGATTGTCTGATGCGATTGATCTGGGTACCACCGGCAAGC TGAAACCAGATGACACCAGACCAAAGCCCGCTTTGCAAGCCCCGGTCATGGAACTGCTCACTGCCGCCATCACGGCCTCC AACGGCGAGCACCAGGTCGCCCTCGATCTGGGCACGTCGATCCCCGGACTGTTGAAAACCCATGTTGAACTGAACATCGG CGAGCGGCCGCAAAATTCTCCCTGGTTGCGCCTGTCCGGTCCCAACGCCGTCGTCACGACGGCGCAGACACGGCTGAAGG TCGATCTTGAAGTGCCCGGCCTGGCGCTGCTGGCAGGGACCAGGGTCCGTATCCCGCTATACGTGGAAATCGCGTCGGCT GAGGCCCGGCTCCGGAAAGTGTCCTGCCGTGCCACGCGCCCCGGCGAAACCATGGTGACCGTGGCCGCGCAACCCTCCGT CGGCCGCGTAATGATCGGAGAGATCAGCCGCAATGACTTCGAGCAAATGGGCCGCACGATGCGTGTCTCGCTTACAAAGA TCGTCGATACGGTGCTGCTGGATGTGCGCGCCAGGGCGGATGCGCGTATCGGAAATGTGAGGTCTGCGGACCTTTCCTTC AGCCAGGCCGACATCGACGCCGGGCGCATCAGGACAGCCACAACCGGCACCTATACCTCGTCGCTGCTGGGCTCCGCGCT GCGAGACCTGGAGGTGCGGGTCGATGCCGGACCGCTCTCTCTGGCGACGCCGTCCCTGATACAGGCGGCCCTGGGCGCGA CGCTGACGCCGGTTCTGGAGCCGGTGGACACTGTCGTCTACAACCTGCTCAGCGTTCTGGGCGTCCATCTGGGCGAAGCC GACATCCGCGTCCATGGCGTCACCTGCCAGGCACCCGTTCTCGTTCAGTGA
Upstream 100 bases:
>100_bases GACGCCAGCAGCCTGCCCATCTGGAATCTCGGGCCGCCTCTGCCCCTGCCGGACAAGACAATCCGCAGCGTCTCCGTCAT CCGGGCGGGAGGGTTCTGAA
Downstream 100 bases:
>100_bases TTAATATGTCCGGAGACGGACTGATCGGGAAGATCAGCCGGCGGCTTCAGACCGGGCGTTTCTCATCGCCTTCGCCGCCC CAGAAGCGTTTGATCTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 576; Mature: 575
Protein sequence:
>576_residues MPCPCRLSLAALRRAREQGGNVAILFALIAPIATLMMAMAIDLGMVNLQRRNMQSMTDLAAITAAGDLHKAETRVLTLLS ENGFGDVLLLAEEDRPKRLDPRYPSRAWVEVVKGHYTADAMLPPALRFEAGGEPFNSVRVTVVQSGRYFIMDGIQAPPLI TTSGVAYSTAEAAFSVGSRLVRIENGALNALLGSLLGSELRLTAMDYHALIGADIALLQMLDVLATDLDLTGVSYDDILE TQISAARLAAAIRQTGMLSVQARTALGRIEAHAGALSTRIRLSDAIDLGTTGKLKPDDTRPKPALQAPVMELLTAAITAS NGEHQVALDLGTSIPGLLKTHVELNIGERPQNSPWLRLSGPNAVVTTAQTRLKVDLEVPGLALLAGTRVRIPLYVEIASA EARLRKVSCRATRPGETMVTVAAQPSVGRVMIGEISRNDFEQMGRTMRVSLTKIVDTVLLDVRARADARIGNVRSADLSF SQADIDAGRIRTATTGTYTSSLLGSALRDLEVRVDAGPLSLATPSLIQAALGATLTPVLEPVDTVVYNLLSVLGVHLGEA DIRVHGVTCQAPVLVQ
Sequences:
>Translated_576_residues MPCPCRLSLAALRRAREQGGNVAILFALIAPIATLMMAMAIDLGMVNLQRRNMQSMTDLAAITAAGDLHKAETRVLTLLS ENGFGDVLLLAEEDRPKRLDPRYPSRAWVEVVKGHYTADAMLPPALRFEAGGEPFNSVRVTVVQSGRYFIMDGIQAPPLI TTSGVAYSTAEAAFSVGSRLVRIENGALNALLGSLLGSELRLTAMDYHALIGADIALLQMLDVLATDLDLTGVSYDDILE TQISAARLAAAIRQTGMLSVQARTALGRIEAHAGALSTRIRLSDAIDLGTTGKLKPDDTRPKPALQAPVMELLTAAITAS NGEHQVALDLGTSIPGLLKTHVELNIGERPQNSPWLRLSGPNAVVTTAQTRLKVDLEVPGLALLAGTRVRIPLYVEIASA EARLRKVSCRATRPGETMVTVAAQPSVGRVMIGEISRNDFEQMGRTMRVSLTKIVDTVLLDVRARADARIGNVRSADLSF SQADIDAGRIRTATTGTYTSSLLGSALRDLEVRVDAGPLSLATPSLIQAALGATLTPVLEPVDTVVYNLLSVLGVHLGEA DIRVHGVTCQAPVLVQ >Mature_575_residues PCPCRLSLAALRRAREQGGNVAILFALIAPIATLMMAMAIDLGMVNLQRRNMQSMTDLAAITAAGDLHKAETRVLTLLSE NGFGDVLLLAEEDRPKRLDPRYPSRAWVEVVKGHYTADAMLPPALRFEAGGEPFNSVRVTVVQSGRYFIMDGIQAPPLIT TSGVAYSTAEAAFSVGSRLVRIENGALNALLGSLLGSELRLTAMDYHALIGADIALLQMLDVLATDLDLTGVSYDDILET QISAARLAAAIRQTGMLSVQARTALGRIEAHAGALSTRIRLSDAIDLGTTGKLKPDDTRPKPALQAPVMELLTAAITASN GEHQVALDLGTSIPGLLKTHVELNIGERPQNSPWLRLSGPNAVVTTAQTRLKVDLEVPGLALLAGTRVRIPLYVEIASAE ARLRKVSCRATRPGETMVTVAAQPSVGRVMIGEISRNDFEQMGRTMRVSLTKIVDTVLLDVRARADARIGNVRSADLSFS QADIDAGRIRTATTGTYTSSLLGSALRDLEVRVDAGPLSLATPSLIQAALGATLTPVLEPVDTVVYNLLSVLGVHLGEAD IRVHGVTCQAPVLVQ
Specific function: Unknown
COG id: COG4655
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61337; Mature: 61206
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCPCRLSLAALRRAREQGGNVAILFALIAPIATLMMAMAIDLGMVNLQRRNMQSMTDLA CCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH AITAAGDLHKAETRVLTLLSENGFGDVLLLAEEDRPKRLDPRYPSRAWVEVVKGHYTADA HHHHCCCCHHHHHEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCC MLPPALRFEAGGEPFNSVRVTVVQSGRYFIMDGIQAPPLITTSGVAYSTAEAAFSVGSRL CCCCCEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCEEEECCCEEHHHHHHHHHCCEE VRIENGALNALLGSLLGSELRLTAMDYHALIGADIALLQMLDVLATDLDLTGVSYDDILE EEEECCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH TQISAARLAAAIRQTGMLSVQARTALGRIEAHAGALSTRIRLSDAIDLGTTGKLKPDDTR HHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCHHHEEEEEECCCCCCCCCCCCCCCCC PKPALQAPVMELLTAAITASNGEHQVALDLGTSIPGLLKTHVELNIGERPQNSPWLRLSG CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHEEEEEEECCCCCCCCCEEEECC PNAVVTTAQTRLKVDLEVPGLALLAGTRVRIPLYVEIASAEARLRKVSCRATRPGETMVT CCEEEEEEEEEEEEEEECCCEEEEECCEEEEEEEEEEECCHHHHHHHCCCCCCCCCEEEE VAAQPSVGRVMIGEISRNDFEQMGRTMRVSLTKIVDTVLLDVRARADARIGNVRSADLSF EEECCCCCEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC SQADIDAGRIRTATTGTYTSSLLGSALRDLEVRVDAGPLSLATPSLIQAALGATLTPVLE CCCCCCCCCEEEEECCCHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHCCHHHHHHH PVDTVVYNLLSVLGVHLGEADIRVHGVTCQAPVLVQ HHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEC >Mature Secondary Structure PCPCRLSLAALRRAREQGGNVAILFALIAPIATLMMAMAIDLGMVNLQRRNMQSMTDLA CCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH AITAAGDLHKAETRVLTLLSENGFGDVLLLAEEDRPKRLDPRYPSRAWVEVVKGHYTADA HHHHCCCCHHHHHEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCC MLPPALRFEAGGEPFNSVRVTVVQSGRYFIMDGIQAPPLITTSGVAYSTAEAAFSVGSRL CCCCCEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCEEEECCCEEHHHHHHHHHCCEE VRIENGALNALLGSLLGSELRLTAMDYHALIGADIALLQMLDVLATDLDLTGVSYDDILE EEEECCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH TQISAARLAAAIRQTGMLSVQARTALGRIEAHAGALSTRIRLSDAIDLGTTGKLKPDDTR HHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCHHHEEEEEECCCCCCCCCCCCCCCCC PKPALQAPVMELLTAAITASNGEHQVALDLGTSIPGLLKTHVELNIGERPQNSPWLRLSG CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHEEEEEEECCCCCCCCCEEEECC PNAVVTTAQTRLKVDLEVPGLALLAGTRVRIPLYVEIASAEARLRKVSCRATRPGETMVT CCEEEEEEEEEEEEEEECCCEEEEECCEEEEEEEEEEECCHHHHHHHCCCCCCCCCEEEE VAAQPSVGRVMIGEISRNDFEQMGRTMRVSLTKIVDTVLLDVRARADARIGNVRSADLSF EEECCCCCEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC SQADIDAGRIRTATTGTYTSSLLGSALRDLEVRVDAGPLSLATPSLIQAALGATLTPVLE CCCCCCCCCEEEEECCCHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHCCHHHHHHH PVDTVVYNLLSVLGVHLGEADIRVHGVTCQAPVLVQ HHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA