| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is phoA [H]
Identifier: 114799748
GI number: 114799748
Start: 3616953
End: 3618542
Strand: Direct
Name: phoA [H]
Synonym: HNE_3483
Alternate gene names: 114799748
Gene position: 3616953-3618542 (Clockwise)
Preceding gene: 114797206
Following gene: 114798593
Centisome position: 97.62
GC content: 64.47
Gene sequence:
>1590_bases ATGCGCCTGGCTGTTGCTGCCCTTGTTTCCACGCTAGCCCTTGCCGCCGCCTGCGCCGCAGCCGTTGCCACAAGCGCAGC GCCCTCGACAAGCACAGCGCCACGCCACGAGCCTATCCTCCCGGTTCAAGCCGAAGATACCTACTATAAATCTGCCGCTG AAGCGGTCGACATTCGCATCGCGGAACGCGGCATCAAACCGGCCAAGAACGTCATCCTGTTCGTCGGCGACGGGATGGGC GTTTCCACCATCACCGCTTCGCGCATCTATGCCGGCCAGTCTGCTGGCGTCGACGGCGAGAGCTTCCGCCTCGCCATGGA ATCCCTGCCCTGGTCAGCCCTCTCCAAGACCTACAGCCACGACTATCAGGTCTCCGACTCGGCGGCGACCGCCACAGCCA TGACCGCCGGCCTCAAGACCAAATCGGGCTTCCTCGGTGTCTCCAGCGCTGCTAATTTCGGCAACTGCGCCAGCGCTCAG GGAACCGAAGCCGATACGCTGTTCGAGATCGCCCAGCGCGCGGGCCTCGCCACCGGCGTCATTTCTACCGCGCGCATCAC CCATGCCACGCCGGGCGCCACCTATGCCAAGGTTCCCCACCGCAACTGGGAGGCCGACGCTGACATGCGCGGGGCCTCAT CCGACACGTGCAAGGACATTGCCCGCCAGCTGATCGAAGGCCCCTCCAGCGACTTCGACGTGATCCTTGGCGGCGGCCGC GCGAAATTCCTGCCTGCCGAAACGCCTGACCCGGAATATCCCGATCAGACCGGCGAGCGCGCTGATGGCCGCAACCTGAT GGAAGAATGGGCCGCCAAGGACGGGACGCGCAAGACCGTGTTCGATCGCGCAGGCTTTGCCGCGATCGACTTTGCCTCTG ATGTGAAGGTCTTCGGCCTCTTCGAACCCTCCCACATGCAATACGAACTCGACCGGGAGGCCGACACCGCGGGCGAGCCT TCACTGGAAGAGATGACCCGCGCCGCCATCACCCGCCTCTCGCGCAATGAAGATGGCTTTGTACTGATGGTGGAAGGTGG CCGGATCGACCATGCCCACCACGCTGGCAACGCCATCCGCGCGCTGGAAGATACCCTCGCCTTTGACGCGGCCATCGCGG CGGCGCTGGAAATGACGAACGCGGAAGACACGCTGATCATCGTCACCGCCGACCATTCCCATAGCCTGACGATCAATGGT TATCCCCAGCGCGGTAATCCGATCCTCGGCCTTGTCACCGCCGGCGCCTCATCCGAAGGCGGATCACTCGGCGCCGACGG CCTGCCCTACACCACGCTGTCTTACGCCAACGGCCCCGGTGCCTGCCGCGAAACCGACAAGGACGCCGAGGGTAAGCCGG AATATGACTGCAAGCGCTACGACCTGACAGGGATCGACACCGGCGCGCCGGATTTCCGCCAGCAATCCCTCGTTCCGCTC TATTCGGAAACGCATGGCGGCGAAGACGTTGCCGCCTTCGCCTCCGGGCCGGGCGCCAACCTCATCTCCGGCGTGATCGA GCAGAACGAGATCTTCCACGTCATGGGCCGGGCCGTTGGTCTGATCCCTGCCCCAGCCGCCGAAGAATGA
Upstream 100 bases:
>100_bases GCTCAGCGCCAAACCGTCCCGCCAGCGGGATAAATTCTCGCAACTGTCACAGGATTGAGTTAAGCGCGGGAGACGTAATC ATCGCCTGAAGGAGGCTCTC
Downstream 100 bases:
>100_bases GCTGACAGTTATCGGCCAGCCGGGCGCAAAACCCCGCTGGCCATGACGGGCACGAAATAGGCAATCGCCAGCGCTGTGTT CGGCACAATGTTCAGCGCAA
Product: alkaline phosphatase
Products: NA
Alternate protein names: APase [H]
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MRLAVAALVSTLALAAACAAAVATSAAPSTSTAPRHEPILPVQAEDTYYKSAAEAVDIRIAERGIKPAKNVILFVGDGMG VSTITASRIYAGQSAGVDGESFRLAMESLPWSALSKTYSHDYQVSDSAATATAMTAGLKTKSGFLGVSSAANFGNCASAQ GTEADTLFEIAQRAGLATGVISTARITHATPGATYAKVPHRNWEADADMRGASSDTCKDIARQLIEGPSSDFDVILGGGR AKFLPAETPDPEYPDQTGERADGRNLMEEWAAKDGTRKTVFDRAGFAAIDFASDVKVFGLFEPSHMQYELDREADTAGEP SLEEMTRAAITRLSRNEDGFVLMVEGGRIDHAHHAGNAIRALEDTLAFDAAIAAALEMTNAEDTLIIVTADHSHSLTING YPQRGNPILGLVTAGASSEGGSLGADGLPYTTLSYANGPGACRETDKDAEGKPEYDCKRYDLTGIDTGAPDFRQQSLVPL YSETHGGEDVAAFASGPGANLISGVIEQNEIFHVMGRAVGLIPAPAAEE
Sequences:
>Translated_529_residues MRLAVAALVSTLALAAACAAAVATSAAPSTSTAPRHEPILPVQAEDTYYKSAAEAVDIRIAERGIKPAKNVILFVGDGMG VSTITASRIYAGQSAGVDGESFRLAMESLPWSALSKTYSHDYQVSDSAATATAMTAGLKTKSGFLGVSSAANFGNCASAQ GTEADTLFEIAQRAGLATGVISTARITHATPGATYAKVPHRNWEADADMRGASSDTCKDIARQLIEGPSSDFDVILGGGR AKFLPAETPDPEYPDQTGERADGRNLMEEWAAKDGTRKTVFDRAGFAAIDFASDVKVFGLFEPSHMQYELDREADTAGEP SLEEMTRAAITRLSRNEDGFVLMVEGGRIDHAHHAGNAIRALEDTLAFDAAIAAALEMTNAEDTLIIVTADHSHSLTING YPQRGNPILGLVTAGASSEGGSLGADGLPYTTLSYANGPGACRETDKDAEGKPEYDCKRYDLTGIDTGAPDFRQQSLVPL YSETHGGEDVAAFASGPGANLISGVIEQNEIFHVMGRAVGLIPAPAAEE >Mature_529_residues MRLAVAALVSTLALAAACAAAVATSAAPSTSTAPRHEPILPVQAEDTYYKSAAEAVDIRIAERGIKPAKNVILFVGDGMG VSTITASRIYAGQSAGVDGESFRLAMESLPWSALSKTYSHDYQVSDSAATATAMTAGLKTKSGFLGVSSAANFGNCASAQ GTEADTLFEIAQRAGLATGVISTARITHATPGATYAKVPHRNWEADADMRGASSDTCKDIARQLIEGPSSDFDVILGGGR AKFLPAETPDPEYPDQTGERADGRNLMEEWAAKDGTRKTVFDRAGFAAIDFASDVKVFGLFEPSHMQYELDREADTAGEP SLEEMTRAAITRLSRNEDGFVLMVEGGRIDHAHHAGNAIRALEDTLAFDAAIAAALEMTNAEDTLIIVTADHSHSLTING YPQRGNPILGLVTAGASSEGGSLGADGLPYTTLSYANGPGACRETDKDAEGKPEYDCKRYDLTGIDTGAPDFRQQSLVPL YSETHGGEDVAAFASGPGANLISGVIEQNEIFHVMGRAVGLIPAPAAEE
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI157266296, Length=502, Percent_Identity=46.8127490039841, Blast_Score=402, Evalue=1e-112, Organism=Homo sapiens, GI94721246, Length=502, Percent_Identity=46.6135458167331, Blast_Score=400, Evalue=1e-111, Organism=Homo sapiens, GI157266292, Length=502, Percent_Identity=45.6175298804781, Blast_Score=395, Evalue=1e-110, Organism=Homo sapiens, GI116734717, Length=512, Percent_Identity=41.6015625, Blast_Score=352, Evalue=6e-97, Organism=Homo sapiens, GI294660770, Length=453, Percent_Identity=43.4878587196468, Blast_Score=341, Evalue=1e-93, Organism=Homo sapiens, GI294660772, Length=431, Percent_Identity=41.5313225058005, Blast_Score=296, Evalue=4e-80, Organism=Escherichia coli, GI48994877, Length=493, Percent_Identity=31.6430020283976, Blast_Score=154, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6320689, Length=348, Percent_Identity=34.1954022988506, Blast_Score=128, Evalue=2e-30, Organism=Drosophila melanogaster, GI85725200, Length=496, Percent_Identity=42.5403225806452, Blast_Score=348, Evalue=7e-96, Organism=Drosophila melanogaster, GI85815833, Length=496, Percent_Identity=42.5403225806452, Blast_Score=348, Evalue=7e-96, Organism=Drosophila melanogaster, GI19921912, Length=469, Percent_Identity=43.7100213219616, Blast_Score=337, Evalue=9e-93, Organism=Drosophila melanogaster, GI21355149, Length=468, Percent_Identity=42.9487179487179, Blast_Score=337, Evalue=1e-92, Organism=Drosophila melanogaster, GI21358067, Length=462, Percent_Identity=42.8571428571429, Blast_Score=337, Evalue=2e-92, Organism=Drosophila melanogaster, GI21355151, Length=502, Percent_Identity=41.0358565737052, Blast_Score=333, Evalue=2e-91, Organism=Drosophila melanogaster, GI24651554, Length=477, Percent_Identity=42.7672955974843, Blast_Score=324, Evalue=9e-89, Organism=Drosophila melanogaster, GI24657835, Length=478, Percent_Identity=39.5397489539749, Blast_Score=323, Evalue=2e-88, Organism=Drosophila melanogaster, GI21355981, Length=542, Percent_Identity=38.1918819188192, Blast_Score=316, Evalue=2e-86, Organism=Drosophila melanogaster, GI24657842, Length=479, Percent_Identity=38.4133611691023, Blast_Score=311, Evalue=7e-85, Organism=Drosophila melanogaster, GI24657827, Length=481, Percent_Identity=39.5010395010395, Blast_Score=310, Evalue=1e-84, Organism=Drosophila melanogaster, GI24651556, Length=464, Percent_Identity=42.2413793103448, Blast_Score=304, Evalue=1e-82, Organism=Drosophila melanogaster, GI24585213, Length=533, Percent_Identity=36.5853658536585, Blast_Score=288, Evalue=8e-78, Organism=Drosophila melanogaster, GI18859923, Length=527, Percent_Identity=36.4326375711575, Blast_Score=285, Evalue=7e-77,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 55385; Mature: 55385
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00123 ALKALINE_PHOSPHATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLAVAALVSTLALAAACAAAVATSAAPSTSTAPRHEPILPVQAEDTYYKSAAEAVDIRI CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHEEEE AERGIKPAKNVILFVGDGMGVSTITASRIYAGQSAGVDGESFRLAMESLPWSALSKTYSH HHCCCCCCCCEEEEEECCCCCHHEEHHHEECCCCCCCCCHHHHHHHHHCCHHHHHHHHCC DYQVSDSAATATAMTAGLKTKSGFLGVSSAANFGNCASAQGTEADTLFEIAQRAGLATGV CEEECCCHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHH ISTARITHATPGATYAKVPHRNWEADADMRGASSDTCKDIARQLIEGPSSDFDVILGGGR HHHHEEEECCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCC AKFLPAETPDPEYPDQTGERADGRNLMEEWAAKDGTRKTVFDRAGFAAIDFASDVKVFGL EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCEEEECCCCCEEEEE FEPSHMQYELDREADTAGEPSLEEMTRAAITRLSRNEDGFVLMVEGGRIDHAHHAGNAIR ECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHCCHHHH ALEDTLAFDAAIAAALEMTNAEDTLIIVTADHSHSLTINGYPQRGNPILGLVTAGASSEG HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCCC GSLGADGLPYTTLSYANGPGACRETDKDAEGKPEYDCKRYDLTGIDTGAPDFRQQSLVPL CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHCCCCCH YSETHGGEDVAAFASGPGANLISGVIEQNEIFHVMGRAVGLIPAPAAEE HHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRLAVAALVSTLALAAACAAAVATSAAPSTSTAPRHEPILPVQAEDTYYKSAAEAVDIRI CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHEEEE AERGIKPAKNVILFVGDGMGVSTITASRIYAGQSAGVDGESFRLAMESLPWSALSKTYSH HHCCCCCCCCEEEEEECCCCCHHEEHHHEECCCCCCCCCHHHHHHHHHCCHHHHHHHHCC DYQVSDSAATATAMTAGLKTKSGFLGVSSAANFGNCASAQGTEADTLFEIAQRAGLATGV CEEECCCHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHH ISTARITHATPGATYAKVPHRNWEADADMRGASSDTCKDIARQLIEGPSSDFDVILGGGR HHHHEEEECCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCC AKFLPAETPDPEYPDQTGERADGRNLMEEWAAKDGTRKTVFDRAGFAAIDFASDVKVFGL EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCEEEECCCCCEEEEE FEPSHMQYELDREADTAGEPSLEEMTRAAITRLSRNEDGFVLMVEGGRIDHAHHAGNAIR ECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHCCHHHH ALEDTLAFDAAIAAALEMTNAEDTLIIVTADHSHSLTINGYPQRGNPILGLVTAGASSEG HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCCC GSLGADGLPYTTLSYANGPGACRETDKDAEGKPEYDCKRYDLTGIDTGAPDFRQQSLVPL CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHCCCCCH YSETHGGEDVAAFASGPGANLISGVIEQNEIFHVMGRAVGLIPAPAAEE HHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2129542 [H]