Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114797206

Identifier: 114797206

GI number: 114797206

Start: 3615953

End: 3616885

Strand: Direct

Name: 114797206

Synonym: HNE_3482

Alternate gene names: NA

Gene position: 3615953-3616885 (Clockwise)

Preceding gene: 114799552

Following gene: 114799748

Centisome position: 97.6

GC content: 64.84

Gene sequence:

>933_bases
ATGACCCAGACACCCCCGGCCACAGCGCCCCTCCCAGTTTCCCTGCCCCCGGCCCGCAGCTGGATTGGCCCGCTTATGGT
GCTGGGCGGCGGCGTTGCCATAGGCTTTGCGCCAATCGGTCTGCGCATCGGCCTCCAGGAATATGGCGGCGAGCTTGGTC
CGCAGGCCATCGCCATGTGGCGCTATATCTTTGCCACCCCGATCCTCTTCGGGCTGGTGCTTCTGATCCATCGCCGCCTG
CCCCGGCCGCCCAACCGGTTCATCATCCTGGCGGGCACCTTCTTCGCCATCGACATTGCCCTCTGGCACTGGGCGCTGAC
CATGACGAGCGTTTCCAACGCCACCTTCATCGTCAATCTCGGCAATGTCGGCGTCGGCATCGTTGCGTGGCTGTTCCTGA
AGGAACGCCCCGGCATGCACTGGTTTGTCGCCGCCAGCCTCGCCATCTGCGGCGCCGCTGCCCTGTCCCTGGGTGGCGCG
GCGCTGCACACCGGCGGCCTGAAAGGCGACCTCTTTGCCTTGGCGGCGGCCGGTTTCGTGGCCGGATACATGATGTTCTC
AAAGCTCGGGCGGCGGAACCTCAGCGGCATTGAAGCCATCTTCTGGCTCAGCGTGGTGGAATCCCTCGTGGCCTTCCTCA
TCGTTCTCCTTGCCGGGGAGCGGGTGCTGCCAATGACCGCCAATGGCTTCATTGTGCCGGTGTTCCTTGCCATCGTCGCC
CATGTGATGGGACAGGGGCTTATCGTTTCCGGCCTTGGATGGACGAATACCGCCGTGGCAGGAATCCTGGTTCTGGCCCA
ACCGGTCGTCGCCGCTGCCATTGCCTGGAAACTGTTTGAGGAACCCCTCACCGCCCTACAGGCGGCGGGCGCTGCCACCA
TTCTGGTCGCGGTCTGGCTGGCTCAGCGCCAAACCGTCCCGCCAGCGGGATAA

Upstream 100 bases:

>100_bases
ACGGAAAGAAACTTTCCAAACGCAATGCTGACAAAAGTCTGGCTGCCTGGCGCGCAGAGGGGATGACGCCGGAAGATATT
CGGGCCATGACAGCGCCCGC

Downstream 100 bases:

>100_bases
ATTCTCGCAACTGTCACAGGATTGAGTTAAGCGCGGGAGACGTAATCATCGCCTGAAGGAGGCTCTCATGCGCCTGGCTG
TTGCTGCCCTTGTTTCCACG

Product: putative transporter

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MTQTPPATAPLPVSLPPARSWIGPLMVLGGGVAIGFAPIGLRIGLQEYGGELGPQAIAMWRYIFATPILFGLVLLIHRRL
PRPPNRFIILAGTFFAIDIALWHWALTMTSVSNATFIVNLGNVGVGIVAWLFLKERPGMHWFVAASLAICGAAALSLGGA
ALHTGGLKGDLFALAAAGFVAGYMMFSKLGRRNLSGIEAIFWLSVVESLVAFLIVLLAGERVLPMTANGFIVPVFLAIVA
HVMGQGLIVSGLGWTNTAVAGILVLAQPVVAAAIAWKLFEEPLTALQAAGAATILVAVWLAQRQTVPPAG

Sequences:

>Translated_310_residues
MTQTPPATAPLPVSLPPARSWIGPLMVLGGGVAIGFAPIGLRIGLQEYGGELGPQAIAMWRYIFATPILFGLVLLIHRRL
PRPPNRFIILAGTFFAIDIALWHWALTMTSVSNATFIVNLGNVGVGIVAWLFLKERPGMHWFVAASLAICGAAALSLGGA
ALHTGGLKGDLFALAAAGFVAGYMMFSKLGRRNLSGIEAIFWLSVVESLVAFLIVLLAGERVLPMTANGFIVPVFLAIVA
HVMGQGLIVSGLGWTNTAVAGILVLAQPVVAAAIAWKLFEEPLTALQAAGAATILVAVWLAQRQTVPPAG
>Mature_309_residues
TQTPPATAPLPVSLPPARSWIGPLMVLGGGVAIGFAPIGLRIGLQEYGGELGPQAIAMWRYIFATPILFGLVLLIHRRLP
RPPNRFIILAGTFFAIDIALWHWALTMTSVSNATFIVNLGNVGVGIVAWLFLKERPGMHWFVAASLAICGAAALSLGGAA
LHTGGLKGDLFALAAAGFVAGYMMFSKLGRRNLSGIEAIFWLSVVESLVAFLIVLLAGERVLPMTANGFIVPVFLAIVAH
VMGQGLIVSGLGWTNTAVAGILVLAQPVVAAAIAWKLFEEPLTALQAAGAATILVAVWLAQRQTVPPAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32498; Mature: 32367

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTPPATAPLPVSLPPARSWIGPLMVLGGGVAIGFAPIGLRIGLQEYGGELGPQAIAMW
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHEECHHHHCCCCCHHHHHHH
RYIFATPILFGLVLLIHRRLPRPPNRFIILAGTFFAIDIALWHWALTMTSVSNATFIVNL
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
GNVGVGIVAWLFLKERPGMHWFVAASLAICGAAALSLGGAALHTGGLKGDLFALAAAGFV
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHH
AGYMMFSKLGRRNLSGIEAIFWLSVVESLVAFLIVLLAGERVLPMTANGFIVPVFLAIVA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
HVMGQGLIVSGLGWTNTAVAGILVLAQPVVAAAIAWKLFEEPLTALQAAGAATILVAVWL
HHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AQRQTVPPAG
HHCCCCCCCC
>Mature Secondary Structure 
TQTPPATAPLPVSLPPARSWIGPLMVLGGGVAIGFAPIGLRIGLQEYGGELGPQAIAMW
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHEECHHHHCCCCCHHHHHHH
RYIFATPILFGLVLLIHRRLPRPPNRFIILAGTFFAIDIALWHWALTMTSVSNATFIVNL
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
GNVGVGIVAWLFLKERPGMHWFVAASLAICGAAALSLGGAALHTGGLKGDLFALAAAGFV
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHH
AGYMMFSKLGRRNLSGIEAIFWLSVVESLVAFLIVLLAGERVLPMTANGFIVPVFLAIVA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
HVMGQGLIVSGLGWTNTAVAGILVLAQPVVAAAIAWKLFEEPLTALQAAGAATILVAVWL
HHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AQRQTVPPAG
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA