| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is prs
Identifier: 114799706
GI number: 114799706
Start: 352622
End: 353560
Strand: Reverse
Name: prs
Synonym: HNE_0362
Alternate gene names: 114799706
Gene position: 353560-352622 (Counterclockwise)
Preceding gene: 114797428
Following gene: 114800417
Centisome position: 9.54
GC content: 59.74
Gene sequence:
>939_bases ATGAAGCTGATTTCCTGCAATGCAAACCGGCCGCTGTCTGACGCCATTGCCGATTATCTCGACATGCGGCTGACCCGCTC GGAGGTGAAAACCTTCGCTGACCAGGAAATCTTTGTCCGGATTGATGAGAATGTGCGCGGGGAGGATGTGTTCGTCATTC AGTCGACCTCCTATCCGGCCAACGATAATCTGATGCAGCTGTTGATCATGATGGACGCGCTGCGGCGCGCCTCGGCCCGG CGCATTACCGCTGTGATCCCCTATTTCGGCTATGCAAGGCAGGACCGCAAAACCGATGGCCGCACGCCGATTTCGGCCAA GCTGGTGGCAAATCTCATCTCGACGGCAGGCGCTGACCGGGTTTTGACGGTCGACCTGCATGCCGGGCAGATCCAGGGCT TTTTCGACATTCCGACCGATAACCTCTTTGGCGGGCCTGTGATGGTGGACGACATCAAGGAGCGTTACGGCAAGGAAAAG ATCATTGTGGTCTCGCCTGATGTGGGCGGCGTGGTGCGGGCGCGCTCGCTGGCCAAGCGGCTGGATGATGCCGACCTGGC GATTGTCGACAAGCGCCGTCCGGAAGCGGGCAAATCGGAAGTGATGAACATTATCGGCGATGTGCGCGGGGCGCGCTGCA TCATGCTGGACGATATGTGCGACAGTGGCGGCACGCTGGCGAACGCCGCCGCCGCGCTGAAGGAGCATGGCGCAAGTTCG GTTTCAGCCTATGTGACGCATGGGGTGCTGTCGGGCTCAGCCGTGGAGCGGATCGAGAAATCGGTGCTCGACGAGCTGGT GATGACCGACACGATCCAGCCGTCTGAACATGCGCTGAAATCGAAGAATATCCGCGTGCTTCCGATCTCTCCCCTGCTGG GCGAAGCGATCCGCCGGATTGCCAATGAAGAGAGCGTGTCGAAGCTGTTTGACCGCTAG
Upstream 100 bases:
>100_bases GGCCTGATCTGCTGCGGATTCCAGAATCCTGTGGCTTGCGACTCGCGGCTGCCTGTTACAAAAGCGTCGCGAACCCGGCC GGCCAGAAGAGAGCGACCCC
Downstream 100 bases:
>100_bases GCAGCCCCGAACACGCGAAAACAAAAAACCCGCGAGATGGCTCGCGGGTTTTTTTGTGACGTTTTCTTCTGGATTAGGAA GCTACTCGACCGTCCAGCCG
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MKLISCNANRPLSDAIADYLDMRLTRSEVKTFADQEIFVRIDENVRGEDVFVIQSTSYPANDNLMQLLIMMDALRRASAR RITAVIPYFGYARQDRKTDGRTPISAKLVANLISTAGADRVLTVDLHAGQIQGFFDIPTDNLFGGPVMVDDIKERYGKEK IIVVSPDVGGVVRARSLAKRLDDADLAIVDKRRPEAGKSEVMNIIGDVRGARCIMLDDMCDSGGTLANAAAALKEHGASS VSAYVTHGVLSGSAVERIEKSVLDELVMTDTIQPSEHALKSKNIRVLPISPLLGEAIRRIANEESVSKLFDR
Sequences:
>Translated_312_residues MKLISCNANRPLSDAIADYLDMRLTRSEVKTFADQEIFVRIDENVRGEDVFVIQSTSYPANDNLMQLLIMMDALRRASAR RITAVIPYFGYARQDRKTDGRTPISAKLVANLISTAGADRVLTVDLHAGQIQGFFDIPTDNLFGGPVMVDDIKERYGKEK IIVVSPDVGGVVRARSLAKRLDDADLAIVDKRRPEAGKSEVMNIIGDVRGARCIMLDDMCDSGGTLANAAAALKEHGASS VSAYVTHGVLSGSAVERIEKSVLDELVMTDTIQPSEHALKSKNIRVLPISPLLGEAIRRIANEESVSKLFDR >Mature_312_residues MKLISCNANRPLSDAIADYLDMRLTRSEVKTFADQEIFVRIDENVRGEDVFVIQSTSYPANDNLMQLLIMMDALRRASAR RITAVIPYFGYARQDRKTDGRTPISAKLVANLISTAGADRVLTVDLHAGQIQGFFDIPTDNLFGGPVMVDDIKERYGKEK IIVVSPDVGGVVRARSLAKRLDDADLAIVDKRRPEAGKSEVMNIIGDVRGARCIMLDDMCDSGGTLANAAAALKEHGASS VSAYVTHGVLSGSAVERIEKSVLDELVMTDTIQPSEHALKSKNIRVLPISPLLGEAIRRIANEESVSKLFDR
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family
Homologues:
Organism=Homo sapiens, GI4506127, Length=314, Percent_Identity=48.0891719745223, Blast_Score=283, Evalue=1e-76, Organism=Homo sapiens, GI4506129, Length=312, Percent_Identity=48.3974358974359, Blast_Score=282, Evalue=2e-76, Organism=Homo sapiens, GI28557709, Length=313, Percent_Identity=47.6038338658147, Blast_Score=281, Evalue=4e-76, Organism=Homo sapiens, GI84875539, Length=315, Percent_Identity=47.9365079365079, Blast_Score=278, Evalue=4e-75, Organism=Homo sapiens, GI4506133, Length=344, Percent_Identity=37.7906976744186, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI194018537, Length=338, Percent_Identity=36.094674556213, Blast_Score=171, Evalue=6e-43, Organism=Homo sapiens, GI310128524, Length=138, Percent_Identity=32.6086956521739, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI310115209, Length=138, Percent_Identity=32.6086956521739, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI310118259, Length=138, Percent_Identity=32.6086956521739, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI310119946, Length=138, Percent_Identity=32.6086956521739, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI1787458, Length=313, Percent_Identity=56.8690095846645, Blast_Score=355, Evalue=2e-99, Organism=Caenorhabditis elegans, GI25149168, Length=313, Percent_Identity=46.3258785942492, Blast_Score=278, Evalue=2e-75, Organism=Caenorhabditis elegans, GI17554702, Length=313, Percent_Identity=46.3258785942492, Blast_Score=278, Evalue=2e-75, Organism=Caenorhabditis elegans, GI71989924, Length=313, Percent_Identity=46.3258785942492, Blast_Score=277, Evalue=6e-75, Organism=Caenorhabditis elegans, GI17554704, Length=302, Percent_Identity=47.3509933774834, Blast_Score=276, Evalue=8e-75, Organism=Caenorhabditis elegans, GI17570245, Length=337, Percent_Identity=32.0474777448071, Blast_Score=177, Evalue=7e-45, Organism=Saccharomyces cerevisiae, GI6321776, Length=311, Percent_Identity=48.2315112540193, Blast_Score=274, Evalue=1e-74, Organism=Saccharomyces cerevisiae, GI6320946, Length=312, Percent_Identity=46.1538461538462, Blast_Score=265, Evalue=7e-72, Organism=Saccharomyces cerevisiae, GI6319403, Length=313, Percent_Identity=46.0063897763578, Blast_Score=258, Evalue=1e-69, Organism=Saccharomyces cerevisiae, GI6322667, Length=195, Percent_Identity=42.5641025641026, Blast_Score=146, Evalue=5e-36, Organism=Saccharomyces cerevisiae, GI6324511, Length=112, Percent_Identity=42.8571428571429, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI21355239, Length=311, Percent_Identity=46.9453376205788, Blast_Score=275, Evalue=3e-74, Organism=Drosophila melanogaster, GI45551540, Length=334, Percent_Identity=43.7125748502994, Blast_Score=262, Evalue=3e-70, Organism=Drosophila melanogaster, GI24651458, Length=354, Percent_Identity=33.8983050847458, Blast_Score=187, Evalue=6e-48, Organism=Drosophila melanogaster, GI24651456, Length=354, Percent_Identity=33.8983050847458, Blast_Score=187, Evalue=6e-48, Organism=Drosophila melanogaster, GI281362873, Length=354, Percent_Identity=33.8983050847458, Blast_Score=187, Evalue=8e-48, Organism=Drosophila melanogaster, GI24651454, Length=354, Percent_Identity=33.8983050847458, Blast_Score=187, Evalue=8e-48, Organism=Drosophila melanogaster, GI24651462, Length=372, Percent_Identity=31.989247311828, Blast_Score=175, Evalue=3e-44, Organism=Drosophila melanogaster, GI24651464, Length=372, Percent_Identity=31.989247311828, Blast_Score=175, Evalue=3e-44, Organism=Drosophila melanogaster, GI45552010, Length=372, Percent_Identity=31.989247311828, Blast_Score=175, Evalue=3e-44,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): KPRS_HYPNA (Q0C5A1)
Other databases:
- EMBL: CP000158 - RefSeq: YP_759092.1 - ProteinModelPortal: Q0C5A1 - SMR: Q0C5A1 - STRING: Q0C5A1 - GeneID: 4289124 - GenomeReviews: CP000158_GR - KEGG: hne:HNE_0362 - NMPDR: fig|228405.5.peg.356 - TIGR: HNE_0362 - eggNOG: COG0462 - HOGENOM: HBG519284 - OMA: CATHAVF - PhylomeDB: Q0C5A1 - BioCyc: HNEP81032:HNE_0362-MONOMER - GO: GO:0005737 - HAMAP: MF_00583_B - InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 - TIGRFAMs: TIGR01251
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.7.6.1
Molecular weight: Translated: 34131; Mature: 34131
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS00114 PRPP_SYNTHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLISCNANRPLSDAIADYLDMRLTRSEVKTFADQEIFVRIDENVRGEDVFVIQSTSYPA CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCCC NDNLMQLLIMMDALRRASARRITAVIPYFGYARQDRKTDGRTPISAKLVANLISTAGADR CHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCE VLTVDLHAGQIQGFFDIPTDNLFGGPVMVDDIKERYGKEKIIVVSPDVGGVVRARSLAKR EEEEEECCCCCCEEEECCCCCCCCCCEEHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH LDDADLAIVDKRRPEAGKSEVMNIIGDVRGARCIMLDDMCDSGGTLANAAAALKEHGASS CCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCH VSAYVTHGVLSGSAVERIEKSVLDELVMTDTIQPSEHALKSKNIRVLPISPLLGEAIRRI HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEECCHHHHHHHHHH ANEESVSKLFDR HCHHHHHHHHCC >Mature Secondary Structure MKLISCNANRPLSDAIADYLDMRLTRSEVKTFADQEIFVRIDENVRGEDVFVIQSTSYPA CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCCC NDNLMQLLIMMDALRRASARRITAVIPYFGYARQDRKTDGRTPISAKLVANLISTAGADR CHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCE VLTVDLHAGQIQGFFDIPTDNLFGGPVMVDDIKERYGKEKIIVVSPDVGGVVRARSLAKR EEEEEECCCCCCEEEECCCCCCCCCCEEHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH LDDADLAIVDKRRPEAGKSEVMNIIGDVRGARCIMLDDMCDSGGTLANAAAALKEHGASS CCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCH VSAYVTHGVLSGSAVERIEKSVLDELVMTDTIQPSEHALKSKNIRVLPISPLLGEAIRRI HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEECCHHHHHHHHHH ANEESVSKLFDR HCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA