Click here to switch to the map view.

The map label for this gene is yfiH [C]

Identifier: 114797428

GI number: 114797428

Start: 353684

End: 354448

Strand: Reverse

Name: yfiH [C]

Synonym: HNE_0363

Alternate gene names: 114797428

Gene position: 354448-353684 (Counterclockwise)

Preceding gene: 114799547

Following gene: 114799706

Centisome position: 9.57

GC content: 66.27

Gene sequence:

>765_bases
ATGCATCCGCCATTTGCCACCGCCCCCCTGCTCTCCGGTGTTTCCGGGCTATCCCATGGTTACTTCGGCCGCAAAGGCGG
GGTTTCCGGCGGGATTTACGAGAGCCTCAATTCCGGCGAGGGATCGGGCGATGATCCGCGCAATATCGCGGAAAACCGGG
CGCGGATTGCCGGGGCGCTGGGGGCGAAATGGCTGCTCTCCTGTTATCAGGTACATTCGCCGGACGTGGTGACGGTGACG
GCGCCGTGGAGCGAGCGGCCAAAGGCCGATGCGATGGTGACAGACCGGCCGGAGCTCGGGCTCTGCATCCTGTCTGCGGA
CTGCACGCCCGTCCTTTTTGCGGACCCAGAGGCGGGCGTGATCGGCGCGGCGCATGCGGGCTGGAAGGGCGCGATTGGCG
GCGTTCTGGGGCAGACGCTGGCGGCGATGGAGCGGTTAGGCGCGAAACGCGAGCGCATCCGCGCGGCGATCGGGCCGACG
ATCCAGCAGGCGAGCTACGAAGTGGGGCCGGAATTCCGCGAGACGTTCCTCAGCCAGGACGGGGGCAGCGAAGATCTGTT
CATTCCCGGCAAGGGCGACCGGTTTCAGTTTGACCTGCCCGGCTATTGCGCGCGGCAGCTGGAGCGGGCGGGCACCGGCG
CGGTTTTCAATCTGGGGCATGACACCTGCGCGATGGAAGAGACCTATTTCTCCAACCGCCGCCGCAATCTGCGCGGCGAG
CCTGATTATGGCCGGAATGCCGCAGGCATCGTTCTGCTGGCCTGA

Upstream 100 bases:

>100_bases
GCGGCGATTTGACTATGCCAGAGCGACATGTTTTGGCGCGCCGGGACGTGGGCCGCGACGGGTCTTGACGGGCGGCGCCG
CGCCCGGCAGCACGGATGGC

Downstream 100 bases:

>100_bases
TAAGGGCCGATTTGGCCGGATGGGGCCTGATCTGCTGCGGATTCCAGAATCCTGTGGCTTGCGACTCGCGGCTGCCTGTT
ACAAAAGCGTCGCGAACCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MHPPFATAPLLSGVSGLSHGYFGRKGGVSGGIYESLNSGEGSGDDPRNIAENRARIAGALGAKWLLSCYQVHSPDVVTVT
APWSERPKADAMVTDRPELGLCILSADCTPVLFADPEAGVIGAAHAGWKGAIGGVLGQTLAAMERLGAKRERIRAAIGPT
IQQASYEVGPEFRETFLSQDGGSEDLFIPGKGDRFQFDLPGYCARQLERAGTGAVFNLGHDTCAMEETYFSNRRRNLRGE
PDYGRNAAGIVLLA

Sequences:

>Translated_254_residues
MHPPFATAPLLSGVSGLSHGYFGRKGGVSGGIYESLNSGEGSGDDPRNIAENRARIAGALGAKWLLSCYQVHSPDVVTVT
APWSERPKADAMVTDRPELGLCILSADCTPVLFADPEAGVIGAAHAGWKGAIGGVLGQTLAAMERLGAKRERIRAAIGPT
IQQASYEVGPEFRETFLSQDGGSEDLFIPGKGDRFQFDLPGYCARQLERAGTGAVFNLGHDTCAMEETYFSNRRRNLRGE
PDYGRNAAGIVLLA
>Mature_254_residues
MHPPFATAPLLSGVSGLSHGYFGRKGGVSGGIYESLNSGEGSGDDPRNIAENRARIAGALGAKWLLSCYQVHSPDVVTVT
APWSERPKADAMVTDRPELGLCILSADCTPVLFADPEAGVIGAAHAGWKGAIGGVLGQTLAAMERLGAKRERIRAAIGPT
IQQASYEVGPEFRETFLSQDGGSEDLFIPGKGDRFQFDLPGYCARQLERAGTGAVFNLGHDTCAMEETYFSNRRRNLRGE
PDYGRNAAGIVLLA

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=180, Percent_Identity=30, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI190194372, Length=180, Percent_Identity=30, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1788945, Length=234, Percent_Identity=36.3247863247863, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 26939; Mature: 26939

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPPFATAPLLSGVSGLSHGYFGRKGGVSGGIYESLNSGEGSGDDPRNIAENRARIAGAL
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
GAKWLLSCYQVHSPDVVTVTAPWSERPKADAMVTDRPELGLCILSADCTPVLFADPEAGV
HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEECCCCCCCEEEEECCCCEEEEECCCCCE
IGAAHAGWKGAIGGVLGQTLAAMERLGAKRERIRAAIGPTIQQASYEVGPEFRETFLSQD
EECCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHCC
GGSEDLFIPGKGDRFQFDLPGYCARQLERAGTGAVFNLGHDTCAMEETYFSNRRRNLRGE
CCCCCEEECCCCCEEEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCC
PDYGRNAAGIVLLA
CCCCCCCCCEEEEC
>Mature Secondary Structure
MHPPFATAPLLSGVSGLSHGYFGRKGGVSGGIYESLNSGEGSGDDPRNIAENRARIAGAL
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
GAKWLLSCYQVHSPDVVTVTAPWSERPKADAMVTDRPELGLCILSADCTPVLFADPEAGV
HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEECCCCCCCEEEEECCCCEEEEECCCCCE
IGAAHAGWKGAIGGVLGQTLAAMERLGAKRERIRAAIGPTIQQASYEVGPEFRETFLSQD
EECCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHCC
GGSEDLFIPGKGDRFQFDLPGYCARQLERAGTGAVFNLGHDTCAMEETYFSNRRRNLRGE
CCCCCEEECCCCCEEEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCC
PDYGRNAAGIVLLA
CCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]