| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799662
Identifier: 114799662
GI number: 114799662
Start: 3644945
End: 3646813
Strand: Direct
Name: 114799662
Synonym: HNE_3511
Alternate gene names: NA
Gene position: 3644945-3646813 (Clockwise)
Preceding gene: 114798656
Following gene: 114799832
Centisome position: 98.38
GC content: 65.76
Gene sequence:
>1869_bases ATGACGCTGCTGGCGGGGATTGTCCTGCTGGCCGGGAACATTGCGGCGCAAAGACTGCTGGCGGGCGCGCGGCTCGATTT CACCGAGGGCAAGCTCTACACGCTTTCTGATGCGACCCGCGTGACGCTGCGCGATCTGGCCGAGCCGGTGGAGATCACCT ACGTTTACTCCCGGCGCGTGGGACAGGACTATCCGGCGATCCAGGCCCATGCGGCGCGCGTGCGGGAGCTGCTGGCGACC TATGCAGCGGCTTCCGGCGGAAATGTCCGCGTGCGGGAGATTGATCCCAAGCCGTTTTCCGAAGCCGAGGACGAAGCCCT TGCCGCTGGCATCAGCGCCATTCCCGCCTCGGGCAATGATCCGCTCTATTTCGGCATCATCGGGCGCAACGCAATTGACG ATCTGCGCCTCATCCCGTTCCTGGCGCCCGAGCGGGAAACGACGCTGGAATATGACCTGACACGGATGATTGCGCGGCTG GACAATCCCGAACCACCGCGTGTGGGCATCATCAGCTCCCTGCCCGGCATGAAGGCGCTGGACGGGGAAAGCGGCTATGT CGTTTTGCAGGACATCGGGCGCAGCTTTAGCGTGGAGCAGATCCCGGATGATTTCGGGTCGTTGCCAGAAATGGATGTGC TGCTTGTGGCCCATCCCGGCACGCTCACGGCGCGGCAGGAATGGCTGATCGACCAGTTCATTCTGCGGCAGGGGCGCGCG ATCTTCGTGGTCGACCCCGCAGCGAAGACGGCGCTGTCCGGTGCGATGTTTTCGGCGACCGACTCGCTGGCGCGCTCCAG CCTCGGGCGGCTCGGCGCGGTCTGGGGTGTGGAACTTGCGCCGCAGGCGGTGGCAGACGCGGCCAACGCGCTTACCGTAC CGGTGGAGTCGTTTACCGGGCGCGTGGATGAGGTTGCCCACCCGCTGTTTGTCGGCGTGCCCGCCGAAACGATGAGCCGG AACGATCCGATCACGGCAGACCTGATGCGCGTGGTGAATTTTGGCGCGCCGGGGGCGTTGATCCAGGGAAGCCTTCCTGA GGGCGTAATATTGGCGCCGCTGATCACGACCGGGCCGAGCCCCTCCTTCATCGATCCGGCACGCGCCGCGCGCGACATGG CGGCAGATGAGGTCTTACAAAGCTACATGACCGAAGCGGCGCCGCTGGTGATGGCGGCGCGCCTGTCGGGCCGCTTGCCG AGCGCCTTTCCCAATGGGGCGCCTGCGATGGACGAACCCTCCGACGCAAGCGACCTTGAGGCTGCAAAGGCCGAGGCCGC GAGCCTGCCCCCGCATATTGCCGCCAGCGAGACACCGGCCGAAGTGGTGATGATTGCTGACGCGGACTTTCTGGCGGATG ATTTCTATGTGGTGCCGGGCTCGGGCATGGTGGTGGCGGACAATGGCGCGCTGCTGCTGAATGCCATCGACGCGCTGGCG GGCCGGGGCGAGCTGTCGCGGCTTCGCTCCCGCGCGGCAAGCCTGCGGCCGATGGTGCGTATCGAGACGATGCGTGACGC GGCAGAGACGCAATACTTCCGCCAGCAATCGGAGCTGGAAGCGCGCCTCTCCACGGCGCAGGCACGCTTGAGCGAGCTGC AGTCGAGCGCTTCAGGCGACGGTTTCTTCGCAGGCGATCCCGAAGCCGAGCTCACGGCCGATGAACGGGCGGAGCTGTCT ACCCTGCGCGAAGACATTCTGACCATTCGCGCGAGCCTGCGCGATATTGAACGCGACTATCGCCGGGACATCGATGCGCT GGAGGCCACCCTCAAGGCGATCAATATCTGGGGCGGGCCTTTGCTGGTGACGCTGGCGGGCATTCTGGTCTGGCGCCGTC AGGCCAAAAAGCGGCGGGGCGCCGCATGA
Upstream 100 bases:
>100_bases CTTTCTGGGCTTTACGGCGACCTTCGCGTTTCTCAACTGCCTCTGGGCATCGCGCCGGAGGCTTGGCTGAAAGATGAAGG CGCGCCGCTATCTGGTTTTG
Downstream 100 bases:
>100_bases CCGCGCTGAGAAACCAGCACAGGGCCTTCCGGGTCAAGGTGATGGGCGCGGTTGCCGGCGCGCTCGTGCTCGCCGCCATT GGCAGCCAGTTTCTGGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 622; Mature: 621
Protein sequence:
>622_residues MTLLAGIVLLAGNIAAQRLLAGARLDFTEGKLYTLSDATRVTLRDLAEPVEITYVYSRRVGQDYPAIQAHAARVRELLAT YAAASGGNVRVREIDPKPFSEAEDEALAAGISAIPASGNDPLYFGIIGRNAIDDLRLIPFLAPERETTLEYDLTRMIARL DNPEPPRVGIISSLPGMKALDGESGYVVLQDIGRSFSVEQIPDDFGSLPEMDVLLVAHPGTLTARQEWLIDQFILRQGRA IFVVDPAAKTALSGAMFSATDSLARSSLGRLGAVWGVELAPQAVADAANALTVPVESFTGRVDEVAHPLFVGVPAETMSR NDPITADLMRVVNFGAPGALIQGSLPEGVILAPLITTGPSPSFIDPARAARDMAADEVLQSYMTEAAPLVMAARLSGRLP SAFPNGAPAMDEPSDASDLEAAKAEAASLPPHIAASETPAEVVMIADADFLADDFYVVPGSGMVVADNGALLLNAIDALA GRGELSRLRSRAASLRPMVRIETMRDAAETQYFRQQSELEARLSTAQARLSELQSSASGDGFFAGDPEAELTADERAELS TLREDILTIRASLRDIERDYRRDIDALEATLKAINIWGGPLLVTLAGILVWRRQAKKRRGAA
Sequences:
>Translated_622_residues MTLLAGIVLLAGNIAAQRLLAGARLDFTEGKLYTLSDATRVTLRDLAEPVEITYVYSRRVGQDYPAIQAHAARVRELLAT YAAASGGNVRVREIDPKPFSEAEDEALAAGISAIPASGNDPLYFGIIGRNAIDDLRLIPFLAPERETTLEYDLTRMIARL DNPEPPRVGIISSLPGMKALDGESGYVVLQDIGRSFSVEQIPDDFGSLPEMDVLLVAHPGTLTARQEWLIDQFILRQGRA IFVVDPAAKTALSGAMFSATDSLARSSLGRLGAVWGVELAPQAVADAANALTVPVESFTGRVDEVAHPLFVGVPAETMSR NDPITADLMRVVNFGAPGALIQGSLPEGVILAPLITTGPSPSFIDPARAARDMAADEVLQSYMTEAAPLVMAARLSGRLP SAFPNGAPAMDEPSDASDLEAAKAEAASLPPHIAASETPAEVVMIADADFLADDFYVVPGSGMVVADNGALLLNAIDALA GRGELSRLRSRAASLRPMVRIETMRDAAETQYFRQQSELEARLSTAQARLSELQSSASGDGFFAGDPEAELTADERAELS TLREDILTIRASLRDIERDYRRDIDALEATLKAINIWGGPLLVTLAGILVWRRQAKKRRGAA >Mature_621_residues TLLAGIVLLAGNIAAQRLLAGARLDFTEGKLYTLSDATRVTLRDLAEPVEITYVYSRRVGQDYPAIQAHAARVRELLATY AAASGGNVRVREIDPKPFSEAEDEALAAGISAIPASGNDPLYFGIIGRNAIDDLRLIPFLAPERETTLEYDLTRMIARLD NPEPPRVGIISSLPGMKALDGESGYVVLQDIGRSFSVEQIPDDFGSLPEMDVLLVAHPGTLTARQEWLIDQFILRQGRAI FVVDPAAKTALSGAMFSATDSLARSSLGRLGAVWGVELAPQAVADAANALTVPVESFTGRVDEVAHPLFVGVPAETMSRN DPITADLMRVVNFGAPGALIQGSLPEGVILAPLITTGPSPSFIDPARAARDMAADEVLQSYMTEAAPLVMAARLSGRLPS AFPNGAPAMDEPSDASDLEAAKAEAASLPPHIAASETPAEVVMIADADFLADDFYVVPGSGMVVADNGALLLNAIDALAG RGELSRLRSRAASLRPMVRIETMRDAAETQYFRQQSELEARLSTAQARLSELQSSASGDGFFAGDPEAELTADERAELST LREDILTIRASLRDIERDYRRDIDALEATLKAINIWGGPLLVTLAGILVWRRQAKKRRGAA
Specific function: Unknown
COG id: COG3225
COG function: function code N; ABC-type uncharacterized transport system involved in gliding motility, auxiliary component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66431; Mature: 66300
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLAGIVLLAGNIAAQRLLAGARLDFTEGKLYTLSDATRVTLRDLAEPVEITYVYSRRV CHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEECCCHHHHHHHCCCCEEEEEEEHHHC GQDYPAIQAHAARVRELLATYAAASGGNVRVREIDPKPFSEAEDEALAAGISAIPASGND CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHCHHHCCCCCCC PLYFGIIGRNAIDDLRLIPFLAPERETTLEYDLTRMIARLDNPEPPRVGIISSLPGMKAL CEEEEEECCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEHECCCCCCCCC DGESGYVVLQDIGRSFSVEQIPDDFGSLPEMDVLLVAHPGTLTARQEWLIDQFILRQGRA CCCCCEEEEECCCCCCCHHHCCHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCE IFVVDPAAKTALSGAMFSATDSLARSSLGRLGAVWGVELAPQAVADAANALTVPVESFTG EEEECCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEHHHHCC RVDEVAHPLFVGVPAETMSRNDPITADLMRVVNFGAPGALIQGSLPEGVILAPLITTGPS CHHHHCCCEEEECCHHHHCCCCCHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEEECCCC PSFIDPARAARDMAADEVLQSYMTEAAPLVMAARLSGRLPSAFPNGAPAMDEPSDASDLE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH AAKAEAASLPPHIAASETPAEVVMIADADFLADDFYVVPGSGMVVADNGALLLNAIDALA HHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCEEEECCCEEEHHHHHHHH GRGELSRLRSRAASLRPMVRIETMRDAAETQYFRQQSELEARLSTAQARLSELQSSASGD CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GFFAGDPEAELTADERAELSTLREDILTIRASLRDIERDYRRDIDALEATLKAINIWGGP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LLVTLAGILVWRRQAKKRRGAA HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TLLAGIVLLAGNIAAQRLLAGARLDFTEGKLYTLSDATRVTLRDLAEPVEITYVYSRRV HHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEECCCHHHHHHHCCCCEEEEEEEHHHC GQDYPAIQAHAARVRELLATYAAASGGNVRVREIDPKPFSEAEDEALAAGISAIPASGND CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHCHHHCCCCCCC PLYFGIIGRNAIDDLRLIPFLAPERETTLEYDLTRMIARLDNPEPPRVGIISSLPGMKAL CEEEEEECCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEHECCCCCCCCC DGESGYVVLQDIGRSFSVEQIPDDFGSLPEMDVLLVAHPGTLTARQEWLIDQFILRQGRA CCCCCEEEEECCCCCCCHHHCCHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCE IFVVDPAAKTALSGAMFSATDSLARSSLGRLGAVWGVELAPQAVADAANALTVPVESFTG EEEECCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEHHHHCC RVDEVAHPLFVGVPAETMSRNDPITADLMRVVNFGAPGALIQGSLPEGVILAPLITTGPS CHHHHCCCEEEECCHHHHCCCCCHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEEECCCC PSFIDPARAARDMAADEVLQSYMTEAAPLVMAARLSGRLPSAFPNGAPAMDEPSDASDLE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH AAKAEAASLPPHIAASETPAEVVMIADADFLADDFYVVPGSGMVVADNGALLLNAIDALA HHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCEEEECCCEEEHHHHHHHH GRGELSRLRSRAASLRPMVRIETMRDAAETQYFRQQSELEARLSTAQARLSELQSSASGD CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GFFAGDPEAELTADERAELSTLREDILTIRASLRDIERDYRRDIDALEATLKAINIWGGP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LLVTLAGILVWRRQAKKRRGAA HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA