| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is ppx [H]
Identifier: 114799621
GI number: 114799621
Start: 1847038
End: 1848105
Strand: Direct
Name: ppx [H]
Synonym: HNE_1801
Alternate gene names: 114799621
Gene position: 1847038-1848105 (Clockwise)
Preceding gene: 114800169
Following gene: 114798748
Centisome position: 49.85
GC content: 63.2
Gene sequence:
>1068_bases GTGCAGGCTCGCCCCAAAACCAGTCGCCCGCTGTATGCAGCGGTCGATCTGGGCACCAATAATTGCCGCCTGCTTGTGGC GGAGCCGCGAGGGCAAACCTTCCGCGTCGTGGACTCGCACTCCCAGATCGCCAGACTGGGGGAGGGGCTCCACGATACTG GGCGTTTGTCAGAAGCGGCCATCGAGCGCGCGCTGGATGCCCTCCACACGATTCGGCGAAAACTGCGCCATCATGGGGTG GGTCGGGTCCGTTGCATTGCGACTGAGGCTTGCCGGAAAGCCGAGAATGGCCCGGAGTTCATTCAGAGGGTTCATTCCGA AACCGGCCTGACCTTCAAGGTCATCGGCGCTAAGGAGGAGGCCCGGCTGGCGACAATCGGATGCCATGATCTGCTCGTTG CGCCTGCCAAGTCCGTCCTGGTGGTGGATATTGGGGGCGGCTCGACGGAGTTGTCGCTTCTCGATGCCGAAGCCACGCGC GGGCAGGGGCTCAAGGGCATGCTTAACCGCGCGCAGATCATCGACTGGACAAGCCTCAAGACAGGCGTTGTCACCATGAG CGATGCTTTCCAGGGATATGACGAAGTCGCTGCCTGGCCGCTGATGCTGAACCGCGCCCGCGAGATTGTCGCTGCCTGGC CCGGCCTTGCCAATGTGCAGCAGCGCCTTGCTGATGACGAAGGCTATCTGATCGGAACATCGGGAACGGTCACTTGCCTG GCCGGGGTCCATCTCAAGCTTGACCGCTACCGCCGTGATAAGGTGGATGGTGCCTGGATGAGCCGCGACGAGGGCGCCGC GACCATTGATCTGCTCCGGGAGCTGGGCGTCTCCGGCCGCGCGAAACTTCCGACCATCGGTGAGGAGCGCGCGCCCTTGA TGCTTGCAGGCTGTTCGATCATGCAAGCCGTATGGGAAGCTTTCGAGGGCAAGCGGCTGCGCGTGGCGGATCGCGGACTT CGTGAAGGCCTTCTATTGTCCATGATGTATGGTCAGCCCAAGAACCGGAGCCGGCGGCGCAAAGGGCGCGGCGGTCGCCC CAGCCCTCAGGAGGCTCCAAATGAGTGA
Upstream 100 bases:
>100_bases TACTGGTCATTTTCAGCTCCTGTGATAGACATTGCCCCAAGTTTTCCTTTCGGGCCACACCATGGCTGACAAAAAAGACC GGGGAGAGCCGCCCAAACGT
Downstream 100 bases:
>100_bases CGACGACAGAAGGCGGTGGAAAGGACCGGGGCCGGAACGCCAGGATTCCGGACGGCGGTCGACCGAACGCAAGGTCATTG CCCGCAACGCCCGGACTGAG
Product: Ppx/GppA family phosphatase
Products: NA
Alternate protein names: ExopolyPase; Metaphosphatase [H]
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MQARPKTSRPLYAAVDLGTNNCRLLVAEPRGQTFRVVDSHSQIARLGEGLHDTGRLSEAAIERALDALHTIRRKLRHHGV GRVRCIATEACRKAENGPEFIQRVHSETGLTFKVIGAKEEARLATIGCHDLLVAPAKSVLVVDIGGGSTELSLLDAEATR GQGLKGMLNRAQIIDWTSLKTGVVTMSDAFQGYDEVAAWPLMLNRAREIVAAWPGLANVQQRLADDEGYLIGTSGTVTCL AGVHLKLDRYRRDKVDGAWMSRDEGAATIDLLRELGVSGRAKLPTIGEERAPLMLAGCSIMQAVWEAFEGKRLRVADRGL REGLLLSMMYGQPKNRSRRRKGRGGRPSPQEAPNE
Sequences:
>Translated_355_residues MQARPKTSRPLYAAVDLGTNNCRLLVAEPRGQTFRVVDSHSQIARLGEGLHDTGRLSEAAIERALDALHTIRRKLRHHGV GRVRCIATEACRKAENGPEFIQRVHSETGLTFKVIGAKEEARLATIGCHDLLVAPAKSVLVVDIGGGSTELSLLDAEATR GQGLKGMLNRAQIIDWTSLKTGVVTMSDAFQGYDEVAAWPLMLNRAREIVAAWPGLANVQQRLADDEGYLIGTSGTVTCL AGVHLKLDRYRRDKVDGAWMSRDEGAATIDLLRELGVSGRAKLPTIGEERAPLMLAGCSIMQAVWEAFEGKRLRVADRGL REGLLLSMMYGQPKNRSRRRKGRGGRPSPQEAPNE >Mature_355_residues MQARPKTSRPLYAAVDLGTNNCRLLVAEPRGQTFRVVDSHSQIARLGEGLHDTGRLSEAAIERALDALHTIRRKLRHHGV GRVRCIATEACRKAENGPEFIQRVHSETGLTFKVIGAKEEARLATIGCHDLLVAPAKSVLVVDIGGGSTELSLLDAEATR GQGLKGMLNRAQIIDWTSLKTGVVTMSDAFQGYDEVAAWPLMLNRAREIVAAWPGLANVQQRLADDEGYLIGTSGTVTCL AGVHLKLDRYRRDKVDGAWMSRDEGAATIDLLRELGVSGRAKLPTIGEERAPLMLAGCSIMQAVWEAFEGKRLRVADRGL REGLLLSMMYGQPKNRSRRRKGRGGRPSPQEAPNE
Specific function: Degradation of inorganic polyphosphates. Orthophosphate is released progressively from the ends of polyphosphate [H]
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI1788848, Length=334, Percent_Identity=27.2455089820359, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI48994966, Length=348, Percent_Identity=27.5862068965517, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022371 - InterPro: IPR003695 [H]
Pfam domain/function: PF02541 Ppx-GppA [H]
EC number: =3.6.1.11 [H]
Molecular weight: Translated: 38799; Mature: 38799
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: PS00329 HSP70_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQARPKTSRPLYAAVDLGTNNCRLLVAEPRGQTFRVVDSHSQIARLGEGLHDTGRLSEAA CCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCHHHHHHHHCCCCCCCHHHHHH IERALDALHTIRRKLRHHGVGRVRCIATEACRKAENGPEFIQRVHSETGLTFKVIGAKEE HHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCC ARLATIGCHDLLVAPAKSVLVVDIGGGSTELSLLDAEATRGQGLKGMLNRAQIIDWTSLK CEEEEECHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHEEEECCCC TGVVTMSDAFQGYDEVAAWPLMLNRAREIVAAWPGLANVQQRLADDEGYLIGTSGTVTCL CCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCCEEEE AGVHLKLDRYRRDKVDGAWMSRDEGAATIDLLRELGVSGRAKLPTIGEERAPLMLAGCSI ECCEEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHH MQAVWEAFEGKRLRVADRGLREGLLLSMMYGQPKNRSRRRKGRGGRPSPQEAPNE HHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MQARPKTSRPLYAAVDLGTNNCRLLVAEPRGQTFRVVDSHSQIARLGEGLHDTGRLSEAA CCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCHHHHHHHHCCCCCCCHHHHHH IERALDALHTIRRKLRHHGVGRVRCIATEACRKAENGPEFIQRVHSETGLTFKVIGAKEE HHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCC ARLATIGCHDLLVAPAKSVLVVDIGGGSTELSLLDAEATRGQGLKGMLNRAQIIDWTSLK CEEEEECHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHEEEECCCC TGVVTMSDAFQGYDEVAAWPLMLNRAREIVAAWPGLANVQQRLADDEGYLIGTSGTVTCL CCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCCEEEE AGVHLKLDRYRRDKVDGAWMSRDEGAATIDLLRELGVSGRAKLPTIGEERAPLMLAGCSI ECCEEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHH MQAVWEAFEGKRLRVADRGLREGLLLSMMYGQPKNRSRRRKGRGGRPSPQEAPNE HHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]