| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799591
Identifier: 114799591
GI number: 114799591
Start: 2384225
End: 2385451
Strand: Reverse
Name: 114799591
Synonym: HNE_2283
Alternate gene names: NA
Gene position: 2385451-2384225 (Counterclockwise)
Preceding gene: 114798852
Following gene: 114798135
Centisome position: 64.38
GC content: 65.04
Gene sequence:
>1227_bases ATGTCTGACCGTTTCGAAGCGTTCCGGTATTCGTCCTATACCCGCTATTTCATCTCGCGCTTCTTCACCTCTTTTTCGGT TCAGGTGCTCTCGGTCGCGGTTGGCTGGCAGATCTATGACGCTACGCGCGATCCGGCGCTGCTCGGCTGGATCGGCCTCG TCCAGTTCCTGCCGGCGCTCTGCCTCGTCGTGGTCACCGGCAATGCCGCAGACCGGCTCGGCCGCCGCCTTGTGATGGCA TGTGCCATGCTGCTGATGATGGCCTGCGCCGGCACGATCCTCTTCCTCGCCACAACGGACCAGTTTGCGCCCGTCCTGGT GCTAAGCGTGCTCACGATGTTTGGTGTGGCGCGCGCCTTCTATGGGCCGGCCTCGACCAGCCTTGCGGTCAACCTCGTGC CCAAGGAAGTGTTTCCCAATGCGGTGGGGTGGATTTCCTCGTCCTGGCAGCTGGCCACCATTGCCGGGCCGGTCGCCGGG GGGCTGCTTTACGGCCTCTCGCCCATGGCCGCCTATGGCACCGCCACGACGCTCTTTGCCGTGGGCGCCACGCTCATCCT GACGATCCCCAAGCCCGTCCAGAAGGTCGACAAGGCCCCTACGACCCTTTCCAGCCTCCTTGGGGGCTTCAGCTATATCT GGAAGGAGAAGATCGTCCTGGGCGCGATCACGCTGGACCTGTTCGCCGTGCTGCTGGGCGGAGCGATCGCCCTGATGCCG GTCTATGCGCGCGACATTCTCGATGTGGGCGAAATGGGCCTCGGCCTGCTGCGCGCGGCGCCGGGCGTTGGCGCCATCAT TGCCATCGCCATCATTACCGCGTTCCCGATCCGGGATTATGCGGGGTGGATCTTGCTCGTCTCCGTGGCCTTCTTCGGCT TGGCAACCGCTGTGTTCGGCGCCTCAACGCTTGCCTGGCTCTCCATCCTCGCCCTGATGTTTGTGGGCGGGTTCGACATG GTGTCGGTCTATGTCCGCGAGATTCTGGTGCAGATCTGGACGCCGGATACGGTGCGGGGGCGGGTGAATGCGGTGAACTC GATCTTCGTGGGCGCCTCCAATGAGTTGGGGGAGACGCGGGCCGGGTTCATGGCGGCGGCGCTGGGGCCGGTGTTTACCG TGGTGGCGGGGGGAATCGCGGCAGTGGGCGTGGCGGGGCTGTCGGCCTTCCTGTTCCCGAAGCTGCGGGATGCGCGGCGG CTGCATGAGGGGCGGCCAGAGCATTAG
Upstream 100 bases:
>100_bases ACCGGCGGCCGGAACCGCGTCGAGAGCATCGCCGCCTGATTGACTTGGGCGCGCTAGCGGCCCACAGCGGCTGACCAGCC ATACTGGAGCCTGCGCGTTC
Downstream 100 bases:
>100_bases GCCAAGAAAAAACCCGCGCCGGAAAGCGCGGGTTCTTTGAAAAGTTCCAAAAGGAACAAGACCTTACTTGATCTTGCCTT CTTTGAACTCGACGTGCTTC
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; Facilitator Superfamily Transporter; DrugProton Antiporter; MFS Permease; Permease Of Facilitator Superfamily; Membrane Transporter; Transporter Facilitator Family; Transmembrane Protein; MFS Family Transporter; Facilitator Superfamily; Facilitator MFS1 Protein; Permease Facilitator Superfamily; Siderophore Export Protein; Macrolide-Efflux Protein; Integral Membrane Protein; Facilitator Superfamily Transporter Permease; Permease Protein; Facilitator Superfamily Multidrug Resistance Protein; Permease; Mfs Transporter; Permease MDR ; Facilitator Superfamily Transmembrane Transporter; Arabinose Efflux Permease; Permease Of Facilitator Superfamily Protein; Drug Proton Antiporter; Integral Membrane Protein MFS Transporter; Multidrug ABC Transporter Permease; Membrame Protein; DrugH+ Antiporter; Facilitator Family Transporter; Drug Resistance Efflux Protein; Facilitator Superfamily Transporter Transporter
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MSDRFEAFRYSSYTRYFISRFFTSFSVQVLSVAVGWQIYDATRDPALLGWIGLVQFLPALCLVVVTGNAADRLGRRLVMA CAMLLMMACAGTILFLATTDQFAPVLVLSVLTMFGVARAFYGPASTSLAVNLVPKEVFPNAVGWISSSWQLATIAGPVAG GLLYGLSPMAAYGTATTLFAVGATLILTIPKPVQKVDKAPTTLSSLLGGFSYIWKEKIVLGAITLDLFAVLLGGAIALMP VYARDILDVGEMGLGLLRAAPGVGAIIAIAIITAFPIRDYAGWILLVSVAFFGLATAVFGASTLAWLSILALMFVGGFDM VSVYVREILVQIWTPDTVRGRVNAVNSIFVGASNELGETRAGFMAAALGPVFTVVAGGIAAVGVAGLSAFLFPKLRDARR LHEGRPEH
Sequences:
>Translated_408_residues MSDRFEAFRYSSYTRYFISRFFTSFSVQVLSVAVGWQIYDATRDPALLGWIGLVQFLPALCLVVVTGNAADRLGRRLVMA CAMLLMMACAGTILFLATTDQFAPVLVLSVLTMFGVARAFYGPASTSLAVNLVPKEVFPNAVGWISSSWQLATIAGPVAG GLLYGLSPMAAYGTATTLFAVGATLILTIPKPVQKVDKAPTTLSSLLGGFSYIWKEKIVLGAITLDLFAVLLGGAIALMP VYARDILDVGEMGLGLLRAAPGVGAIIAIAIITAFPIRDYAGWILLVSVAFFGLATAVFGASTLAWLSILALMFVGGFDM VSVYVREILVQIWTPDTVRGRVNAVNSIFVGASNELGETRAGFMAAALGPVFTVVAGGIAAVGVAGLSAFLFPKLRDARR LHEGRPEH >Mature_407_residues SDRFEAFRYSSYTRYFISRFFTSFSVQVLSVAVGWQIYDATRDPALLGWIGLVQFLPALCLVVVTGNAADRLGRRLVMAC AMLLMMACAGTILFLATTDQFAPVLVLSVLTMFGVARAFYGPASTSLAVNLVPKEVFPNAVGWISSSWQLATIAGPVAGG LLYGLSPMAAYGTATTLFAVGATLILTIPKPVQKVDKAPTTLSSLLGGFSYIWKEKIVLGAITLDLFAVLLGGAIALMPV YARDILDVGEMGLGLLRAAPGVGAIIAIAIITAFPIRDYAGWILLVSVAFFGLATAVFGASTLAWLSILALMFVGGFDMV SVYVREILVQIWTPDTVRGRVNAVNSIFVGASNELGETRAGFMAAALGPVFTVVAGGIAAVGVAGLSAFLFPKLRDARRL HEGRPEH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43224; Mature: 43092
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRFEAFRYSSYTRYFISRFFTSFSVQVLSVAVGWQIYDATRDPALLGWIGLVQFLPAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHH CLVVVTGNAADRLGRRLVMACAMLLMMACAGTILFLATTDQFAPVLVLSVLTMFGVARAF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHH YGPASTSLAVNLVPKEVFPNAVGWISSSWQLATIAGPVAGGLLYGLSPMAAYGTATTLFA CCCCCCCEEEEECCHHHCCCHHHHCCCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHHHH VGATLILTIPKPVQKVDKAPTTLSSLLGGFSYIWKEKIVLGAITLDLFAVLLGGAIALMP HHHHHEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH VYARDILDVGEMGLGLLRAAPGVGAIIAIAIITAFPIRDYAGWILLVSVAFFGLATAVFG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASTLAWLSILALMFVGGFDMVSVYVREILVQIWTPDTVRGRVNAVNSIFVGASNELGETR HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCCCHHH AGFMAAALGPVFTVVAGGIAAVGVAGLSAFLFPKLRDARRLHEGRPEH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SDRFEAFRYSSYTRYFISRFFTSFSVQVLSVAVGWQIYDATRDPALLGWIGLVQFLPAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHH CLVVVTGNAADRLGRRLVMACAMLLMMACAGTILFLATTDQFAPVLVLSVLTMFGVARAF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHH YGPASTSLAVNLVPKEVFPNAVGWISSSWQLATIAGPVAGGLLYGLSPMAAYGTATTLFA CCCCCCCEEEEECCHHHCCCHHHHCCCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHHHH VGATLILTIPKPVQKVDKAPTTLSSLLGGFSYIWKEKIVLGAITLDLFAVLLGGAIALMP HHHHHEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH VYARDILDVGEMGLGLLRAAPGVGAIIAIAIITAFPIRDYAGWILLVSVAFFGLATAVFG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASTLAWLSILALMFVGGFDMVSVYVREILVQIWTPDTVRGRVNAVNSIFVGASNELGETR HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCCCHHH AGFMAAALGPVFTVVAGGIAAVGVAGLSAFLFPKLRDARRLHEGRPEH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA