Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114799546

Identifier: 114799546

GI number: 114799546

Start: 2530235

End: 2531659

Strand: Reverse

Name: 114799546

Synonym: HNE_2422

Alternate gene names: NA

Gene position: 2531659-2530235 (Counterclockwise)

Preceding gene: 114797717

Following gene: 114797354

Centisome position: 68.33

GC content: 63.86

Gene sequence:

>1425_bases
ATGGGCCTGATGCCGGCAGTGGACGGACCGGAAGCGGATCTTGCCGCTGCCGGTTCCGTTTCGGGGTCGCGAAAGCTCGA
TCGTTCCGCCTGGTCATGGGCCACCTACCAGGCGGGGCGTGACCCCTATATCGGCCTCGTCAACGGCTTCCTCTTCGCGC
CGTATTTCGCAACTCTGGTTGTGGGCGACGGCGTAAAAGGGCAGGCGATGATTGCCCAGATGGGCATGATCTCGGGTCTG
ACGGTTGCCTTCATTGCCCCGGTCATCGGCGCAACGGTGGACACCATCGGCCCGCGCAAGCCCTGGCTCGCGCTGATCAC
GCTGATGGTCATTCCCCTGATGATGTCGCTCTGGTTCGCGGCGCCGGGCGGGGCGATTCTCTCGCCCTGGGTCGTCGTCG
GCATCCTCGGACTGATCTCAATTCTTCTCTCCTGCGGCGAAGTGCTCTTCTCCTCGATGCTGCCCTATGCGGCGGCCCCG
CGCATGCGGCCGATGGCGTCGGGCCTCGCCCTCTCCCTCGGCAACGTCACCTCGATAATCCTGCTCGTCTTCATCCTGAT
GGCGCTGATGCTGCCGGAGCAGCCCCTCTTCGGCCTCTCCAAGGAAAACAGCGAGCCCGACCGGATGGTCCCCATCCTCG
TCGCGCTCACTTTTGCTCTCTGCGCCATCCCGCTGTTCCTCTTCAGCAAGGACGCGGCCAAATCCGGTGGCAAGGCAGAT
GCCTCCTCCGTCCGGGCAGGCGTCGGCTCGCTCATCTCTCTCATCCGTAACTGGAAACAGAATTCCGATGCGATGATCTA
CCTCCTCGCGCGCACGCTGGCGCAGGATGCCGGAGGCGTGCTCCTCATCCTCTGCGGTGTCTATGCGGCCGGCGTCATGG
GTTGGGCTGGTACGGAAATGCTGGTCTACGGACTGCTCGGCTGCGTCGCAGGCCTCATCGGCGGCGTCCTCGCCGGCTGG
CTGGACGAAACCTTCGGACCCAGGATCGCCTTCCAGATCGAGATCGCAGGCTCCGTCATCGGCCTCATCGGCATTATCGG
CGCCGCGCCCGCGCAGATCCTCTTCATGCCGGTCGCTGATCCCCAGCCCATCTGGAACGCGCCGATGTTCACGACGCTGC
CAGAGCTGGTCTTTGTCTTCTTTGGCTTCCTCGGCTTCGTCTTCCAGATCGCAGCCTGGTCTTCCAGCCGCACACTGCTG
ACACGCCTCGCGCCCGCCTCCCAGATGGGCGCGTTCTTTGGTCTGGCTGCGCTTGCGGGCAACTCCACCAGCTGGCTTGG
CCCCATGTTCGTCGGCATTTTCACCGCAGTCTTCCATTCGCAACAGGCTGGCTTCATCCCCGTCGCCGTCCTGTTTGCGG
CAGGGTTCATCCTCCTCTTCTTCGTGAAGGGCGGCGGCAAGGAACCAGATTTGGCCCCCGATTGA

Upstream 100 bases:

>100_bases
TACCTCACCTCGGCCAACCCGATCGACAGCCTCGGCGTGGACCTTCTGACTTATTCCCGCCCGCGTAGCGCTGGCCTCTT
CCTGCGCTACAACTACTGAG

Downstream 100 bases:

>100_bases
TCTAAAGTTTCCTCCCAGATCGGTTTGGGCCAAAAGAAAGGCGCGGGGGCTGTCCCTCCCGCGCCTTTCAACATTTGTAG
GTAGGCAGAGGAAACGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Transporter; MFS Superfamily Transporter; Facilitator Superfamily Permease; Transporter Facilitator Family; Transmembrane Protein; Permease Facilitator Superfamily; MFS Transporter UMF1 Family

Number of amino acids: Translated: 474; Mature: 473

Protein sequence:

>474_residues
MGLMPAVDGPEADLAAAGSVSGSRKLDRSAWSWATYQAGRDPYIGLVNGFLFAPYFATLVVGDGVKGQAMIAQMGMISGL
TVAFIAPVIGATVDTIGPRKPWLALITLMVIPLMMSLWFAAPGGAILSPWVVVGILGLISILLSCGEVLFSSMLPYAAAP
RMRPMASGLALSLGNVTSIILLVFILMALMLPEQPLFGLSKENSEPDRMVPILVALTFALCAIPLFLFSKDAAKSGGKAD
ASSVRAGVGSLISLIRNWKQNSDAMIYLLARTLAQDAGGVLLILCGVYAAGVMGWAGTEMLVYGLLGCVAGLIGGVLAGW
LDETFGPRIAFQIEIAGSVIGLIGIIGAAPAQILFMPVADPQPIWNAPMFTTLPELVFVFFGFLGFVFQIAAWSSSRTLL
TRLAPASQMGAFFGLAALAGNSTSWLGPMFVGIFTAVFHSQQAGFIPVAVLFAAGFILLFFVKGGGKEPDLAPD

Sequences:

>Translated_474_residues
MGLMPAVDGPEADLAAAGSVSGSRKLDRSAWSWATYQAGRDPYIGLVNGFLFAPYFATLVVGDGVKGQAMIAQMGMISGL
TVAFIAPVIGATVDTIGPRKPWLALITLMVIPLMMSLWFAAPGGAILSPWVVVGILGLISILLSCGEVLFSSMLPYAAAP
RMRPMASGLALSLGNVTSIILLVFILMALMLPEQPLFGLSKENSEPDRMVPILVALTFALCAIPLFLFSKDAAKSGGKAD
ASSVRAGVGSLISLIRNWKQNSDAMIYLLARTLAQDAGGVLLILCGVYAAGVMGWAGTEMLVYGLLGCVAGLIGGVLAGW
LDETFGPRIAFQIEIAGSVIGLIGIIGAAPAQILFMPVADPQPIWNAPMFTTLPELVFVFFGFLGFVFQIAAWSSSRTLL
TRLAPASQMGAFFGLAALAGNSTSWLGPMFVGIFTAVFHSQQAGFIPVAVLFAAGFILLFFVKGGGKEPDLAPD
>Mature_473_residues
GLMPAVDGPEADLAAAGSVSGSRKLDRSAWSWATYQAGRDPYIGLVNGFLFAPYFATLVVGDGVKGQAMIAQMGMISGLT
VAFIAPVIGATVDTIGPRKPWLALITLMVIPLMMSLWFAAPGGAILSPWVVVGILGLISILLSCGEVLFSSMLPYAAAPR
MRPMASGLALSLGNVTSIILLVFILMALMLPEQPLFGLSKENSEPDRMVPILVALTFALCAIPLFLFSKDAAKSGGKADA
SSVRAGVGSLISLIRNWKQNSDAMIYLLARTLAQDAGGVLLILCGVYAAGVMGWAGTEMLVYGLLGCVAGLIGGVLAGWL
DETFGPRIAFQIEIAGSVIGLIGIIGAAPAQILFMPVADPQPIWNAPMFTTLPELVFVFFGFLGFVFQIAAWSSSRTLLT
RLAPASQMGAFFGLAALAGNSTSWLGPMFVGIFTAVFHSQQAGFIPVAVLFAAGFILLFFVKGGGKEPDLAPD

Specific function: Unknown

COG id: COG2270

COG function: function code R; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49564; Mature: 49432

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLMPAVDGPEADLAAAGSVSGSRKLDRSAWSWATYQAGRDPYIGLVNGFLFAPYFATLV
CCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
VGDGVKGQAMIAQMGMISGLTVAFIAPVIGATVDTIGPRKPWLALITLMVIPLMMSLWFA
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
APGGAILSPWVVVGILGLISILLSCGEVLFSSMLPYAAAPRMRPMASGLALSLGNVTSII
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHH
LLVFILMALMLPEQPLFGLSKENSEPDRMVPILVALTFALCAIPLFLFSKDAAKSGGKAD
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC
ASSVRAGVGSLISLIRNWKQNSDAMIYLLARTLAQDAGGVLLILCGVYAAGVMGWAGTEM
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHH
LVYGLLGCVAGLIGGVLAGWLDETFGPRIAFQIEIAGSVIGLIGIIGAAPAQILFMPVAD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHCCCCEEEEEECCC
PQPIWNAPMFTTLPELVFVFFGFLGFVFQIAAWSSSRTLLTRLAPASQMGAFFGLAALAG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHCC
NSTSWLGPMFVGIFTAVFHSQQAGFIPVAVLFAAGFILLFFVKGGGKEPDLAPD
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
GLMPAVDGPEADLAAAGSVSGSRKLDRSAWSWATYQAGRDPYIGLVNGFLFAPYFATLV
CCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
VGDGVKGQAMIAQMGMISGLTVAFIAPVIGATVDTIGPRKPWLALITLMVIPLMMSLWFA
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
APGGAILSPWVVVGILGLISILLSCGEVLFSSMLPYAAAPRMRPMASGLALSLGNVTSII
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHH
LLVFILMALMLPEQPLFGLSKENSEPDRMVPILVALTFALCAIPLFLFSKDAAKSGGKAD
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC
ASSVRAGVGSLISLIRNWKQNSDAMIYLLARTLAQDAGGVLLILCGVYAAGVMGWAGTEM
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHH
LVYGLLGCVAGLIGGVLAGWLDETFGPRIAFQIEIAGSVIGLIGIIGAAPAQILFMPVAD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHCCCCEEEEEECCC
PQPIWNAPMFTTLPELVFVFFGFLGFVFQIAAWSSSRTLLTRLAPASQMGAFFGLAALAG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHCC
NSTSWLGPMFVGIFTAVFHSQQAGFIPVAVLFAAGFILLFFVKGGGKEPDLAPD
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA