| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799541
Identifier: 114799541
GI number: 114799541
Start: 1550234
End: 1551079
Strand: Direct
Name: 114799541
Synonym: HNE_1515
Alternate gene names: NA
Gene position: 1550234-1551079 (Clockwise)
Preceding gene: 114798415
Following gene: 114797228
Centisome position: 41.84
GC content: 60.52
Gene sequence:
>846_bases ATGTCGAGACTGGCGATCTTCTCTCTTCTGGCGTTCGGACTTTCAGCCTGCGGTGCTCCGCCCAAGCCGCAGACAGATAG AGCTGACCGCCCGATGCGGATCGTCAGTCTCGATTACTGCGCAGATCAATACGTTCTGAAACTGGCGGATGCGGAGCAGA TCCTTGCAATATCGCCGGACGGCGTGAAGGAGTTTTCCTATATGCGCCACGAGGCGGCCGGGGTGCCGACGGTTCGGCCA GTGGCAGAGGATGTGCTGCTTCTCAAGCCGGATCTCGTCGTCCGCGCTTATGGAGGCGGACCAAACGCCGCGGCTTTTTT TGAACGTGCGGACGTCCCTGTGCTGACAGTAGGATGGACCTCGAATGTTGACAGCGAAGAAGTTGGCTCCATTCCGGGAT TGATCCACTATATGGCTGAAGGCCTCGGTCAGAGCGAGCGGGGGCGGGCTCTCGTCGCCGAGTTCCGCGCGCGCCTGGAA GCCCTCCGCAAGCGCACAAATGGCGAGACAGCCCTTTACATGACCCCGGCAGGCATTACGACCGGTCCCGGTTCCATGGT GCATGAAATGCTTCTGGAAGCAGGCTTCGAAAACTTCGAACGGAAGCCGGGCTGGCGCTCACTTCCGCTCGAACGCCTTG CCTATGAGCAGCCGGACGCCATCGCTGCCGCTTTCTTCGAGCAGCTGACAAACCATCCGGACTCCTGGAGCCCGATGAAG CATCCGGTCGCGAAGCGTCAAATGAATGAGCAGACGATGGTCCCCCTGAAGGGCGCCTGGACCGCCTGTGGCGGCTGGTT CATTCTCGATGCCATCGAAGCCTTGGCAGAGGGAGGCGCGGAATGA
Upstream 100 bases:
>100_bases CGAAAACCTGTTTGATGAGGATTATCAGCAGATCCTCGGCTACGGCACGCCCGGCCTTTCAGGCTCGGTTGGCATCCGCC TGCGCTACTAGGAGTAGCTG
Downstream 100 bases:
>100_bases TTGAGCGTCTTTTGTTGCCTGGCCTGATCGCCGCCTCCGTGCTCGCCATCTTCATCGCCTGCCTTCTGGGCTCTACACCT TTGCCTGCCGATCGGGTCAT
Product: putative iron ABC transporter periplasmic iron-binding protein
Products: NA
Alternate protein names: ABC-Type Transport System Periplasmic Component; Fe ABC Transporter; ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MSRLAIFSLLAFGLSACGAPPKPQTDRADRPMRIVSLDYCADQYVLKLADAEQILAISPDGVKEFSYMRHEAAGVPTVRP VAEDVLLLKPDLVVRAYGGGPNAAAFFERADVPVLTVGWTSNVDSEEVGSIPGLIHYMAEGLGQSERGRALVAEFRARLE ALRKRTNGETALYMTPAGITTGPGSMVHEMLLEAGFENFERKPGWRSLPLERLAYEQPDAIAAAFFEQLTNHPDSWSPMK HPVAKRQMNEQTMVPLKGAWTACGGWFILDAIEALAEGGAE
Sequences:
>Translated_281_residues MSRLAIFSLLAFGLSACGAPPKPQTDRADRPMRIVSLDYCADQYVLKLADAEQILAISPDGVKEFSYMRHEAAGVPTVRP VAEDVLLLKPDLVVRAYGGGPNAAAFFERADVPVLTVGWTSNVDSEEVGSIPGLIHYMAEGLGQSERGRALVAEFRARLE ALRKRTNGETALYMTPAGITTGPGSMVHEMLLEAGFENFERKPGWRSLPLERLAYEQPDAIAAAFFEQLTNHPDSWSPMK HPVAKRQMNEQTMVPLKGAWTACGGWFILDAIEALAEGGAE >Mature_280_residues SRLAIFSLLAFGLSACGAPPKPQTDRADRPMRIVSLDYCADQYVLKLADAEQILAISPDGVKEFSYMRHEAAGVPTVRPV AEDVLLLKPDLVVRAYGGGPNAAAFFERADVPVLTVGWTSNVDSEEVGSIPGLIHYMAEGLGQSERGRALVAEFRARLEA LRKRTNGETALYMTPAGITTGPGSMVHEMLLEAGFENFERKPGWRSLPLERLAYEQPDAIAAAFFEQLTNHPDSWSPMKH PVAKRQMNEQTMVPLKGAWTACGGWFILDAIEALAEGGAE
Specific function: Unknown
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30616; Mature: 30485
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLAIFSLLAFGLSACGAPPKPQTDRADRPMRIVSLDYCADQYVLKLADAEQILAISPD CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEECCC GVKEFSYMRHEAAGVPTVRPVAEDVLLLKPDLVVRAYGGGPNAAAFFERADVPVLTVGWT CHHHHHHHHHHHCCCCCCHHHHHHHEEECCCEEEEEECCCCCHHHHHHHCCCCEEEECCC SNVDSEEVGSIPGLIHYMAEGLGQSERGRALVAEFRARLEALRKRTNGETALYMTPAGIT CCCCHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC TGPGSMVHEMLLEAGFENFERKPGWRSLPLERLAYEQPDAIAAAFFEQLTNHPDSWSPMK CCCHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHH HPVAKRQMNEQTMVPLKGAWTACGGWFILDAIEALAEGGAE CHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SRLAIFSLLAFGLSACGAPPKPQTDRADRPMRIVSLDYCADQYVLKLADAEQILAISPD CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEECCC GVKEFSYMRHEAAGVPTVRPVAEDVLLLKPDLVVRAYGGGPNAAAFFERADVPVLTVGWT CHHHHHHHHHHHCCCCCCHHHHHHHEEECCCEEEEEECCCCCHHHHHHHCCCCEEEECCC SNVDSEEVGSIPGLIHYMAEGLGQSERGRALVAEFRARLEALRKRTNGETALYMTPAGIT CCCCHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC TGPGSMVHEMLLEAGFENFERKPGWRSLPLERLAYEQPDAIAAAFFEQLTNHPDSWSPMK CCCHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHH HPVAKRQMNEQTMVPLKGAWTACGGWFILDAIEALAEGGAE CHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA