| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799501
Identifier: 114799501
GI number: 114799501
Start: 216654
End: 217025
Strand: Reverse
Name: 114799501
Synonym: HNE_0223
Alternate gene names: NA
Gene position: 217025-216654 (Counterclockwise)
Preceding gene: 114797506
Following gene: 114799303
Centisome position: 5.86
GC content: 57.8
Gene sequence:
>372_bases ATGGCTGAATATTCCCGAAAGCTCGCGCATGCATTGCCGCTAGCCTTTATGCTCTCCTGCAGTTCGGCCGTTGCGCAATA TGCGCCGGTTGACACAACGCCCCAGGGTCAAACAGCGACAGGCGTGATCGCGAATAAATTATCGGGCGATATTGCCGGCG GAGAAAGCGGATCAAATACCATTTCTAGCCGTTGCTTTGCGGATTCGGGCCCCGGCCCCGAGCGGCGCGCTATGGAAGCG GAGTATGCCGAACGCCTCAACGTGGCTGGCAAAGCCGACGCCGATGCCTGGCGCGAACAACATGGGCGCGACTATCGCGC ACGGCTTGTTGCGGAAGGAAAATGTCCCGCGGGCGTAATAGATCAAAAATAA
Upstream 100 bases:
>100_bases CCTGTTGGCGAATGTTCATCCCCAGATACCTATATTGCGACCACTGACCTGCTTAAAATCGCAGGTGGGGCGCTCATGGG GCGTAGATCAGGAGAAGTTC
Downstream 100 bases:
>100_bases GCTTGGCGCCCGCGAGGAGCACCAAGCCATGAGCATTGATCGCACGTCCCCGGTTATTCTTGCTGAACAACCAGCGCCTT GCCTGCCCATTCTACCGGAT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MAEYSRKLAHALPLAFMLSCSSAVAQYAPVDTTPQGQTATGVIANKLSGDIAGGESGSNTISSRCFADSGPGPERRAMEA EYAERLNVAGKADADAWREQHGRDYRARLVAEGKCPAGVIDQK
Sequences:
>Translated_123_residues MAEYSRKLAHALPLAFMLSCSSAVAQYAPVDTTPQGQTATGVIANKLSGDIAGGESGSNTISSRCFADSGPGPERRAMEA EYAERLNVAGKADADAWREQHGRDYRARLVAEGKCPAGVIDQK >Mature_122_residues AEYSRKLAHALPLAFMLSCSSAVAQYAPVDTTPQGQTATGVIANKLSGDIAGGESGSNTISSRCFADSGPGPERRAMEAE YAERLNVAGKADADAWREQHGRDYRARLVAEGKCPAGVIDQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12973; Mature: 12841
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEYSRKLAHALPLAFMLSCSSAVAQYAPVDTTPQGQTATGVIANKLSGDIAGGESGSNT CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCH ISSRCFADSGPGPERRAMEAEYAERLNVAGKADADAWREQHGRDYRARLVAEGKCPAGVI HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHEEECCCCCCCCC DQK CCC >Mature Secondary Structure AEYSRKLAHALPLAFMLSCSSAVAQYAPVDTTPQGQTATGVIANKLSGDIAGGESGSNT CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCH ISSRCFADSGPGPERRAMEAEYAERLNVAGKADADAWREQHGRDYRARLVAEGKCPAGVI HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHEEECCCCCCCCC DQK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA