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The map label for this gene is yfmJ [H]

Identifier: 114799480

GI number: 114799480

Start: 726579

End: 727601

Strand: Reverse

Name: yfmJ [H]

Synonym: HNE_0714

Alternate gene names: 114799480

Gene position: 727601-726579 (Counterclockwise)

Preceding gene: 114800463

Following gene: 114800309

Centisome position: 19.64

GC content: 61.68

Gene sequence:

>1023_bases
ATGTCCAAACTGACCTCGACTGACTGGAGCCTCGCCGCCCGCCCAGTTGGCATGCCCAAGCTATCTGACTTCGCCAGCCG
CGAAGTTGACGTGGCCGACCCTAAGGATGGCGAGATCCAGGTCGTGAACACCTGGATGTCGGTGGACCCCTACATGCGCG
GGCGGATGTATGACCGGGAGAGCTATGTGCCCCCGTTCCAGATTGGCGAGACGCTGCAAGGCGGCGCGGTTGGCCGGGTG
ACGGCGTCGGCCCATCCTGATTTCAAGACGGGTGATCTCGTCAACTCGATGCTCGGCTGGCGCACAGCCTGGGTGGCTGC
GCCGCAAGCGGCGATGGTGCAGAAGCTGCCGAATATCGGCCTGCCGGAAAGCGCGTATCTCGGCGTTGCGGGTATGCCGG
GCCTCACGGCCTATGCCGGCCTCCTGCGCGTGGGTGAACTCAAAGAGGGCGACACGGTGTTTGTCTCCGGCGCGGCTGGC
GCGGTTGGCTCAACCGTTGTCCAGATCGCCAAGATCAAGGGCTGCACGGTGATCGGCACCGCAGGCGGCAAGGAAAAGTG
CGATGTCGTCAAATCCCTCGGCGCCGATCATGTGATTGACTACAAAGAGGCTGGCGGCTTTGACGGTCTTGTGGCGGCGC
TGAAGTCTGCGGCGCCCAAAGGCATCGACGTATATTTCGACAATGTCGGCGGGGATCATCTCTCCGCGGCGATCGAAGCG
GCCCGGCCGATGGCACGCTTTGCCCTCTGCGGAATGATCGCCCAGTATAACGAGACCGGCAAACCCACCGGCCCGCACAA
CATTATCCAGGCCGTCGGCAAGCAGCTCAAACTTCAGGGCTTTATTGTCTCGAGCCACGCGGATATGACGCCCGCCTTCC
ATGCCGATATGGCGAAATGGATCGCGAGTGGCAAAATGAAATACGAGGAAACAGTCATGAACGGTATCGAGAAGGCGCCT
GCCGCTTTCCTCGGCCTCTTCACCGGTGCCAACACCGGCAAGATGCTGGTCAAGCTGGGCTAA

Upstream 100 bases:

>100_bases
CCGGGTCAGGCAGGTCATCTGAGTGGGACAAAACCGGACAACTCGGGACAAACCGGGACACTTCGGGACACAAAAACACA
CCCCTTAGGAAGGAACGCCC

Downstream 100 bases:

>100_bases
CCGATGGCTGCCCTGTTCGACGCATACATCATGGTGGACTGGAGCGCGGCTGCAAAGCCGTCGCTCGGCGCCAATTCGAT
CTGGATCGGCATCCTGGCCA

Product: L4BD family NADP-dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MSKLTSTDWSLAARPVGMPKLSDFASREVDVADPKDGEIQVVNTWMSVDPYMRGRMYDRESYVPPFQIGETLQGGAVGRV
TASAHPDFKTGDLVNSMLGWRTAWVAAPQAAMVQKLPNIGLPESAYLGVAGMPGLTAYAGLLRVGELKEGDTVFVSGAAG
AVGSTVVQIAKIKGCTVIGTAGGKEKCDVVKSLGADHVIDYKEAGGFDGLVAALKSAAPKGIDVYFDNVGGDHLSAAIEA
ARPMARFALCGMIAQYNETGKPTGPHNIIQAVGKQLKLQGFIVSSHADMTPAFHADMAKWIASGKMKYEETVMNGIEKAP
AAFLGLFTGANTGKMLVKLG

Sequences:

>Translated_340_residues
MSKLTSTDWSLAARPVGMPKLSDFASREVDVADPKDGEIQVVNTWMSVDPYMRGRMYDRESYVPPFQIGETLQGGAVGRV
TASAHPDFKTGDLVNSMLGWRTAWVAAPQAAMVQKLPNIGLPESAYLGVAGMPGLTAYAGLLRVGELKEGDTVFVSGAAG
AVGSTVVQIAKIKGCTVIGTAGGKEKCDVVKSLGADHVIDYKEAGGFDGLVAALKSAAPKGIDVYFDNVGGDHLSAAIEA
ARPMARFALCGMIAQYNETGKPTGPHNIIQAVGKQLKLQGFIVSSHADMTPAFHADMAKWIASGKMKYEETVMNGIEKAP
AAFLGLFTGANTGKMLVKLG
>Mature_339_residues
SKLTSTDWSLAARPVGMPKLSDFASREVDVADPKDGEIQVVNTWMSVDPYMRGRMYDRESYVPPFQIGETLQGGAVGRVT
ASAHPDFKTGDLVNSMLGWRTAWVAAPQAAMVQKLPNIGLPESAYLGVAGMPGLTAYAGLLRVGELKEGDTVFVSGAAGA
VGSTVVQIAKIKGCTVIGTAGGKEKCDVVKSLGADHVIDYKEAGGFDGLVAALKSAAPKGIDVYFDNVGGDHLSAAIEAA
RPMARFALCGMIAQYNETGKPTGPHNIIQAVGKQLKLQGFIVSSHADMTPAFHADMAKWIASGKMKYEETVMNGIEKAPA
AFLGLFTGANTGKMLVKLG

Specific function: Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226059159, Length=333, Percent_Identity=36.9369369369369, Blast_Score=210, Evalue=1e-54,
Organism=Homo sapiens, GI226059133, Length=333, Percent_Identity=36.9369369369369, Blast_Score=210, Evalue=1e-54,
Organism=Homo sapiens, GI226246682, Length=342, Percent_Identity=35.672514619883, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI226246680, Length=342, Percent_Identity=35.672514619883, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI22748929, Length=342, Percent_Identity=35.672514619883, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI226056130, Length=305, Percent_Identity=35.7377049180328, Blast_Score=176, Evalue=3e-44,
Organism=Homo sapiens, GI28557745, Length=335, Percent_Identity=31.3432835820896, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI194239674, Length=227, Percent_Identity=31.7180616740088, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI13236495, Length=227, Percent_Identity=31.7180616740088, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI18379349, Length=230, Percent_Identity=28.2608695652174, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI194239676, Length=202, Percent_Identity=32.1782178217822, Blast_Score=69, Evalue=8e-12,
Organism=Escherichia coli, GI226510941, Length=344, Percent_Identity=40.1162790697674, Blast_Score=260, Evalue=1e-70,
Organism=Escherichia coli, GI1790485, Length=297, Percent_Identity=30.6397306397306, Blast_Score=68, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI133901712, Length=341, Percent_Identity=32.5513196480938, Blast_Score=152, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI133901710, Length=341, Percent_Identity=32.5513196480938, Blast_Score=152, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17507255, Length=142, Percent_Identity=33.0985915492958, Blast_Score=68, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6323504, Length=336, Percent_Identity=29.1666666666667, Blast_Score=121, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6319520, Length=221, Percent_Identity=28.9592760180996, Blast_Score=67, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35728; Mature: 35596

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLTSTDWSLAARPVGMPKLSDFASREVDVADPKDGEIQVVNTWMSVDPYMRGRMYDRE
CCCCCCCCCHHHCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEEEECCCHHHHCEEECHH
SYVPPFQIGETLQGGAVGRVTASAHPDFKTGDLVNSMLGWRTAWVAAPQAAMVQKLPNIG
CCCCCHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
LPESAYLGVAGMPGLTAYAGLLRVGELKEGDTVFVSGAAGAVGSTVVQIAKIKGCTVIGT
CCCCCEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEC
AGGKEKCDVVKSLGADHVIDYKEAGGFDGLVAALKSAAPKGIDVYFDNVGGDHLSAAIEA
CCCCHHHHHHHHCCCCCEEEHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHH
ARPMARFALCGMIAQYNETGKPTGPHNIIQAVGKQLKLQGFIVSSHADMTPAFHADMAKW
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEEEEEECCCCCCCHHHHHHHHH
IASGKMKYEETVMNGIEKAPAAFLGLFTGANTGKMLVKLG
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
>Mature Secondary Structure 
SKLTSTDWSLAARPVGMPKLSDFASREVDVADPKDGEIQVVNTWMSVDPYMRGRMYDRE
CCCCCCCCHHHCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEEEECCCHHHHCEEECHH
SYVPPFQIGETLQGGAVGRVTASAHPDFKTGDLVNSMLGWRTAWVAAPQAAMVQKLPNIG
CCCCCHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
LPESAYLGVAGMPGLTAYAGLLRVGELKEGDTVFVSGAAGAVGSTVVQIAKIKGCTVIGT
CCCCCEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEC
AGGKEKCDVVKSLGADHVIDYKEAGGFDGLVAALKSAAPKGIDVYFDNVGGDHLSAAIEA
CCCCHHHHHHHHCCCCCEEEHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHH
ARPMARFALCGMIAQYNETGKPTGPHNIIQAVGKQLKLQGFIVSSHADMTPAFHADMAKW
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEEEEEECCCCCCCHHHHHHHHH
IASGKMKYEETVMNGIEKAPAAFLGLFTGANTGKMLVKLG
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]